Bacteroides heparinolyticus

Taxonomy: cellular organisms; Bacteria; FCB group; Bacteroidetes/Chlorobi group; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides

Average proteome isoelectric point is 6.6

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2705 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A3P2A0K4|A0A3P2A0K4_9BACE ABC transporter ATP-binding protein OS=Bacteroides heparinolyticus OX=28113 GN=EII33_11270 PE=4 SV=1
MM1 pKa = 8.13GMEE4 pKa = 5.94DD5 pKa = 6.04DD6 pKa = 5.66FLQNDD11 pKa = 4.08LDD13 pKa = 4.06DD14 pKa = 4.74EE15 pKa = 4.4KK16 pKa = 10.66TIEE19 pKa = 4.18YY20 pKa = 9.37IKK22 pKa = 10.96NYY24 pKa = 10.0LPQEE28 pKa = 4.18LKK30 pKa = 11.13GKK32 pKa = 10.47FSDD35 pKa = 3.91DD36 pKa = 2.9EE37 pKa = 4.5FYY39 pKa = 11.59YY40 pKa = 10.87FLDD43 pKa = 5.8LIDD46 pKa = 4.53EE47 pKa = 4.8YY48 pKa = 11.34YY49 pKa = 10.34SEE51 pKa = 5.25SGILDD56 pKa = 3.93AQPDD60 pKa = 3.49ADD62 pKa = 4.35GYY64 pKa = 11.12VEE66 pKa = 4.28IDD68 pKa = 3.08LGKK71 pKa = 10.28VVDD74 pKa = 4.46YY75 pKa = 10.52IVKK78 pKa = 9.54EE79 pKa = 3.85AHH81 pKa = 6.39KK82 pKa = 10.85DD83 pKa = 3.49EE84 pKa = 4.72VGDD87 pKa = 3.92YY88 pKa = 9.99EE89 pKa = 4.21PEE91 pKa = 4.37EE92 pKa = 3.79ILFIVQGEE100 pKa = 4.27MEE102 pKa = 4.35YY103 pKa = 10.38TEE105 pKa = 4.49SLGEE109 pKa = 3.98EE110 pKa = 4.22

Molecular weight: 12.86 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A3P2AAL5|A0A3P2AAL5_9BACE Peptidase S8 OS=Bacteroides heparinolyticus OX=28113 GN=EII33_03945 PE=4 SV=1
MM1 pKa = 7.53WEE3 pKa = 3.82INKK6 pKa = 10.6GIGRR10 pKa = 11.84TVEE13 pKa = 4.19FKK15 pKa = 10.89GLKK18 pKa = 9.01SQYY21 pKa = 10.93LFIFAGGLLATFILVVICYY40 pKa = 7.85MCGMNQYY47 pKa = 9.83LCLGMGVSGATLVVWQTFAMNRR69 pKa = 11.84KK70 pKa = 8.42YY71 pKa = 10.87GEE73 pKa = 4.26HH74 pKa = 6.75GLMKK78 pKa = 10.22RR79 pKa = 11.84GAARR83 pKa = 11.84RR84 pKa = 11.84HH85 pKa = 4.98PRR87 pKa = 11.84YY88 pKa = 9.65LLSRR92 pKa = 11.84RR93 pKa = 11.84PVRR96 pKa = 11.84RR97 pKa = 11.84ILSVRR102 pKa = 11.84TVTTNEE108 pKa = 3.76PTPP111 pKa = 3.75

Molecular weight: 12.62 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2705

0

2705

1004298

28

2397

371.3

41.82

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.59 ± 0.047

1.261 ± 0.016

5.368 ± 0.031

6.627 ± 0.045

4.514 ± 0.028

7.044 ± 0.039

1.973 ± 0.019

6.486 ± 0.042

6.48 ± 0.036

9.202 ± 0.046

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.784 ± 0.022

4.862 ± 0.041

3.808 ± 0.027

3.311 ± 0.025

5.076 ± 0.034

5.96 ± 0.036

5.562 ± 0.031

6.515 ± 0.037

1.258 ± 0.016

4.319 ± 0.03
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski