Corynebacterium camporealensis

Taxonomy: cellular organisms; Bacteria; Terrabacteria group;

Average proteome isoelectric point is 5.76

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2245 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0F6T9I7|A0A0F6T9I7_9CORY Penicillin-insensitive transglycosylase OS=Corynebacterium camporealensis OX=161896 GN=NG00_00154 PE=4 SV=1
MM1 pKa = 7.96PSGTLTKK8 pKa = 11.0YY9 pKa = 10.13NVQDD13 pKa = 3.98EE14 pKa = 4.41LHH16 pKa = 6.52EE17 pKa = 4.62ALDD20 pKa = 3.8AAGAEE25 pKa = 4.14ITVAIQDD32 pKa = 4.11GATLTAGTHH41 pKa = 5.29YY42 pKa = 10.39NVSITGQNILVEE54 pKa = 4.48FTQAGFDD61 pKa = 3.87AIEE64 pKa = 4.58AGDD67 pKa = 3.96LVEE70 pKa = 4.32TTITTRR76 pKa = 11.84TTEE79 pKa = 4.1AVQHH83 pKa = 6.22IPNDD87 pKa = 3.07ATLIVNNGSGDD98 pKa = 3.83TEE100 pKa = 4.33TTSDD104 pKa = 4.76DD105 pKa = 3.28VHH107 pKa = 6.52TYY109 pKa = 8.7WGNLNINKK117 pKa = 9.21IDD119 pKa = 4.1GDD121 pKa = 4.08SEE123 pKa = 4.52APLEE127 pKa = 4.35GAVFQLLQCQAEE139 pKa = 4.28GDD141 pKa = 3.6GWVQVDD147 pKa = 3.63GTEE150 pKa = 4.03PLNVNGQTEE159 pKa = 4.52WTTDD163 pKa = 2.83ADD165 pKa = 4.02GAVTISGIHH174 pKa = 4.39VTDD177 pKa = 3.74YY178 pKa = 11.77ANNADD183 pKa = 4.44DD184 pKa = 4.04TTVDD188 pKa = 3.54YY189 pKa = 11.34CLLEE193 pKa = 3.98TDD195 pKa = 4.73APDD198 pKa = 4.33GYY200 pKa = 10.98VGNDD204 pKa = 3.15ALVHH208 pKa = 5.82FEE210 pKa = 4.48LNRR213 pKa = 11.84GDD215 pKa = 3.8VDD217 pKa = 4.1PEE219 pKa = 4.18TGAPTAQIQYY229 pKa = 8.31TATIEE234 pKa = 4.13NFTDD238 pKa = 3.76EE239 pKa = 4.45NRR241 pKa = 11.84LPNTGGMGVGLLIALGALIIGGGAYY266 pKa = 9.99AARR269 pKa = 11.84RR270 pKa = 11.84NSAKK274 pKa = 10.61AA275 pKa = 3.16

Molecular weight: 28.9 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0F6TCB9|A0A0F6TCB9_9CORY Uncharacterized protein OS=Corynebacterium camporealensis OX=161896 GN=NG00_02025 PE=4 SV=1
MM1 pKa = 7.69AKK3 pKa = 10.06GKK5 pKa = 8.69RR6 pKa = 11.84TFQPNNRR13 pKa = 11.84RR14 pKa = 11.84RR15 pKa = 11.84ARR17 pKa = 11.84KK18 pKa = 8.59HH19 pKa = 4.63GFRR22 pKa = 11.84TRR24 pKa = 11.84MNTRR28 pKa = 11.84AGRR31 pKa = 11.84AIVAARR37 pKa = 11.84RR38 pKa = 11.84KK39 pKa = 9.72KK40 pKa = 10.5GRR42 pKa = 11.84AKK44 pKa = 9.67LTAA47 pKa = 4.21

Molecular weight: 5.45 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2245

0

2245

737566

40

3018

328.5

35.73

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

11.329 ± 0.065

0.706 ± 0.015

6.348 ± 0.047

6.817 ± 0.054

3.393 ± 0.037

8.216 ± 0.057

2.118 ± 0.026

5.141 ± 0.041

3.44 ± 0.041

9.57 ± 0.057

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.254 ± 0.025

3.121 ± 0.031

5.002 ± 0.037

3.516 ± 0.029

5.918 ± 0.046

5.665 ± 0.034

5.831 ± 0.031

7.89 ± 0.042

1.391 ± 0.025

2.333 ± 0.024
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski