Wuhan house centipede virus 5

Taxonomy: Viruses; Riboviria; unclassified Riboviria; unclassified RNA viruses ShiM-2016

Average proteome isoelectric point is 6.73

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1L3KF14|A0A1L3KF14_9VIRU Capsid protein OS=Wuhan house centipede virus 5 OX=1923709 PE=3 SV=1
MM1 pKa = 7.1QVFGVPWGFEE11 pKa = 3.86RR12 pKa = 11.84EE13 pKa = 3.78RR14 pKa = 11.84GYY16 pKa = 10.31PRR18 pKa = 11.84MPATTPPSFNTRR30 pKa = 11.84VQEE33 pKa = 3.81AFTRR37 pKa = 11.84IKK39 pKa = 10.97NEE41 pKa = 3.45VPIISRR47 pKa = 11.84YY48 pKa = 9.9LEE50 pKa = 4.01EE51 pKa = 4.0STNYY55 pKa = 9.28VWPSRR60 pKa = 11.84QIASEE65 pKa = 4.04LKK67 pKa = 9.06SLQVHH72 pKa = 4.98SEE74 pKa = 4.28RR75 pKa = 11.84YY76 pKa = 9.2FKK78 pKa = 11.18LSTNAMHH85 pKa = 7.52PDD87 pKa = 3.66KK88 pKa = 10.69DD89 pKa = 3.91LKK91 pKa = 11.13SAILYY96 pKa = 9.35HH97 pKa = 6.78AEE99 pKa = 3.74SSYY102 pKa = 11.53GKK104 pKa = 10.4ARR106 pKa = 11.84WTLPEE111 pKa = 5.04DD112 pKa = 2.89WWSWRR117 pKa = 11.84AFKK120 pKa = 10.58EE121 pKa = 4.02AVRR124 pKa = 11.84NLDD127 pKa = 3.5MTSSPGIPYY136 pKa = 9.59MKK138 pKa = 10.05EE139 pKa = 3.41APTNGKK145 pKa = 6.64WLKK148 pKa = 9.81WDD150 pKa = 5.05GILCDD155 pKa = 3.67SLQLEE160 pKa = 4.68RR161 pKa = 11.84LWHH164 pKa = 5.98DD165 pKa = 3.46TQKK168 pKa = 11.01VIEE171 pKa = 4.51PEE173 pKa = 3.56FDD175 pKa = 3.09LLLRR179 pKa = 11.84VFIKK183 pKa = 10.43QEE185 pKa = 3.56PHH187 pKa = 6.61KK188 pKa = 10.45KK189 pKa = 9.97RR190 pKa = 11.84KK191 pKa = 9.59ADD193 pKa = 3.47EE194 pKa = 4.32DD195 pKa = 3.26RR196 pKa = 11.84WRR198 pKa = 11.84LIMAAPLSVQVAWQMCFRR216 pKa = 11.84YY217 pKa = 9.86MNDD220 pKa = 3.3LEE222 pKa = 4.26IEE224 pKa = 4.14KK225 pKa = 10.56AYY227 pKa = 10.32DD228 pKa = 3.47LPSQQGIILVSGGWKK243 pKa = 10.06VYY245 pKa = 8.55SQQWKK250 pKa = 9.07EE251 pKa = 3.84QGQTCGMDD259 pKa = 3.17KK260 pKa = 10.95SAWDD264 pKa = 3.21WTAPRR269 pKa = 11.84WALALDD275 pKa = 3.48LEE277 pKa = 4.7FRR279 pKa = 11.84KK280 pKa = 10.16RR281 pKa = 11.84LCNKK285 pKa = 9.26GMNIAWEE292 pKa = 4.82HH293 pKa = 5.61ISEE296 pKa = 4.17TLYY299 pKa = 11.08RR300 pKa = 11.84QMFDD304 pKa = 3.08NPILVLSDD312 pKa = 3.03GTAYY316 pKa = 10.31RR317 pKa = 11.84QVVPGIMKK325 pKa = 9.98SGCVNTISTNSHH337 pKa = 5.2CQVFIHH343 pKa = 6.58IAVALTYY350 pKa = 9.88KK351 pKa = 10.32IPLKK355 pKa = 10.14PLPRR359 pKa = 11.84CVGDD363 pKa = 4.28DD364 pKa = 3.7TLCTIGQSPGGIISYY379 pKa = 9.92YY380 pKa = 10.84DD381 pKa = 3.29SFGVILKK388 pKa = 10.32SISDD392 pKa = 3.51TLEE395 pKa = 3.62FVGRR399 pKa = 11.84EE400 pKa = 4.04FTDD403 pKa = 3.31EE404 pKa = 4.53GPIPMYY410 pKa = 10.14IGKK413 pKa = 8.81HH414 pKa = 3.84VVKK417 pKa = 9.79AQHH420 pKa = 6.27VRR422 pKa = 11.84DD423 pKa = 4.39EE424 pKa = 4.49DD425 pKa = 3.67LSMYY429 pKa = 9.43LDD431 pKa = 3.5SMARR435 pKa = 11.84EE436 pKa = 4.39YY437 pKa = 10.97CHH439 pKa = 7.09SPEE442 pKa = 4.01YY443 pKa = 10.68FEE445 pKa = 4.05VWKK448 pKa = 10.79RR449 pKa = 11.84LADD452 pKa = 3.77EE453 pKa = 5.19LEE455 pKa = 4.4CSLPLSRR462 pKa = 11.84EE463 pKa = 4.13AYY465 pKa = 10.11LYY467 pKa = 10.08WYY469 pKa = 8.87DD470 pKa = 4.02FPEE473 pKa = 4.48DD474 pKa = 3.28

Molecular weight: 55.23 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1L3KF82|A0A1L3KF82_9VIRU Uncharacterized protein OS=Wuhan house centipede virus 5 OX=1923709 PE=4 SV=1
MM1 pKa = 7.79ASYY4 pKa = 10.6CQFSLARR11 pKa = 11.84VLDD14 pKa = 3.93MLQAPVLAPEE24 pKa = 4.08VTGNKK29 pKa = 8.86WGTLFSGLGKK39 pKa = 9.34GTLAFVNGTRR49 pKa = 11.84FGMTCARR56 pKa = 11.84NTYY59 pKa = 9.35EE60 pKa = 5.78ALPDD64 pKa = 3.34WARR67 pKa = 11.84QIILCGGVSAASIYY81 pKa = 10.3AYY83 pKa = 8.63QRR85 pKa = 11.84RR86 pKa = 11.84EE87 pKa = 3.92RR88 pKa = 11.84IKK90 pKa = 11.08DD91 pKa = 3.8RR92 pKa = 11.84IALLRR97 pKa = 11.84TMCKK101 pKa = 9.93RR102 pKa = 11.84KK103 pKa = 9.6IRR105 pKa = 11.84TIVPTPSSKK114 pKa = 10.96VYY116 pKa = 9.54MEE118 pKa = 4.21SVRR121 pKa = 11.84KK122 pKa = 9.92GSEE125 pKa = 3.89EE126 pKa = 4.42RR127 pKa = 11.84PMTSCAAQCTIGRR140 pKa = 11.84IDD142 pKa = 3.34VAGDD146 pKa = 3.51FIVIGNALRR155 pKa = 11.84FDD157 pKa = 4.45EE158 pKa = 4.92DD159 pKa = 3.77WLVGPDD165 pKa = 3.3HH166 pKa = 6.91VLAEE170 pKa = 4.24DD171 pKa = 3.23AVYY174 pKa = 10.79AKK176 pKa = 10.41GRR178 pKa = 11.84QSKK181 pKa = 10.25VSLKK185 pKa = 10.14GFEE188 pKa = 4.1RR189 pKa = 11.84VKK191 pKa = 10.84LATDD195 pKa = 3.83LVAIRR200 pKa = 11.84LKK202 pKa = 10.72SDD204 pKa = 2.53DD205 pKa = 3.24WARR208 pKa = 11.84IGVAVLKK215 pKa = 10.28LGHH218 pKa = 5.94VEE220 pKa = 3.73GSEE223 pKa = 4.28FVSICGPAGTGTCGSMSLDD242 pKa = 3.16HH243 pKa = 7.04EE244 pKa = 4.51RR245 pKa = 11.84FGWTVYY251 pKa = 10.57EE252 pKa = 4.43GTTMPGYY259 pKa = 10.57SGAAYY264 pKa = 10.02QKK266 pKa = 11.03GPMAVSMHH274 pKa = 4.52VHH276 pKa = 6.02GGVVNAGYY284 pKa = 10.11AAGYY288 pKa = 9.37IWVLLKK294 pKa = 10.3IHH296 pKa = 6.23MKK298 pKa = 9.91MYY300 pKa = 10.95DD301 pKa = 4.0EE302 pKa = 4.73DD303 pKa = 4.21TEE305 pKa = 4.76SYY307 pKa = 10.72LRR309 pKa = 11.84EE310 pKa = 3.6QHH312 pKa = 6.42RR313 pKa = 11.84RR314 pKa = 11.84GTITRR319 pKa = 11.84FRR321 pKa = 11.84SSPWGGDD328 pKa = 3.18EE329 pKa = 5.62VIFEE333 pKa = 4.13INGRR337 pKa = 11.84FEE339 pKa = 3.74FHH341 pKa = 7.54RR342 pKa = 11.84EE343 pKa = 3.52RR344 pKa = 11.84NLAAHH349 pKa = 6.91FGEE352 pKa = 4.22NWEE355 pKa = 4.17QVLRR359 pKa = 11.84PRR361 pKa = 11.84GGRR364 pKa = 11.84QYY366 pKa = 10.88SRR368 pKa = 11.84HH369 pKa = 5.46YY370 pKa = 10.03RR371 pKa = 11.84DD372 pKa = 4.17EE373 pKa = 4.25VPEE376 pKa = 4.14GANLVKK382 pKa = 10.7AKK384 pKa = 10.35EE385 pKa = 4.12EE386 pKa = 4.13PEE388 pKa = 3.77EE389 pKa = 4.36SGEE392 pKa = 4.46CKK394 pKa = 10.37CSEE397 pKa = 4.33CLGASNANVVTQGCQQQRR415 pKa = 11.84LLALTQEE422 pKa = 4.1YY423 pKa = 10.01RR424 pKa = 11.84KK425 pKa = 10.12LSRR428 pKa = 11.84ASRR431 pKa = 11.84TKK433 pKa = 9.93FRR435 pKa = 11.84SSLGILKK442 pKa = 8.72NQPITSGLQDD452 pKa = 3.9KK453 pKa = 11.02SPASS457 pKa = 3.53

Molecular weight: 50.72 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3

0

3

1425

457

494

475.0

53.72

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.579 ± 0.865

2.035 ± 0.293

5.123 ± 0.494

6.737 ± 0.242

3.789 ± 0.301

7.158 ± 1.181

1.965 ± 0.255

5.193 ± 0.339

5.193 ± 0.347

7.649 ± 0.531

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.386 ± 0.476

3.298 ± 0.62

5.053 ± 0.627

3.86 ± 0.168

7.018 ± 0.594

7.088 ± 0.194

5.474 ± 0.609

6.807 ± 0.659

2.667 ± 0.619

3.86 ± 0.361
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski