Fowl aviadenovirus 2

Taxonomy: Viruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Tectiliviricetes; Rowavirales; Adenoviridae; Aviadenovirus; Fowl aviadenovirus D

Average proteome isoelectric point is 6.41

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 37 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A191ULH5|A0A191ULH5_9ADEN ORF1B OS=Fowl aviadenovirus 2 OX=172859 PE=4 SV=1
MM1 pKa = 7.24VKK3 pKa = 9.61TGISEE8 pKa = 4.1EE9 pKa = 4.26VAKK12 pKa = 10.91LFATIDD18 pKa = 3.59DD19 pKa = 4.15MSIEE23 pKa = 4.12DD24 pKa = 3.66WFLVFVVLLAILSFLWGMFLGLLCGPGDD52 pKa = 4.78LDD54 pKa = 4.07FAGYY58 pKa = 8.57WGLVFPCLL66 pKa = 3.97

Molecular weight: 7.34 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A191ULH1|A0A191ULH1_9ADEN dUTP diphosphatase OS=Fowl aviadenovirus 2 OX=172859 PE=3 SV=1
MM1 pKa = 7.68SILISPNDD9 pKa = 3.25NRR11 pKa = 11.84GWGMRR16 pKa = 11.84RR17 pKa = 11.84RR18 pKa = 11.84SRR20 pKa = 11.84SSMRR24 pKa = 11.84GVGIRR29 pKa = 11.84RR30 pKa = 11.84RR31 pKa = 11.84RR32 pKa = 11.84LTLRR36 pKa = 11.84TLLGLGTSSRR46 pKa = 11.84RR47 pKa = 11.84RR48 pKa = 11.84SGGRR52 pKa = 11.84SSRR55 pKa = 11.84RR56 pKa = 11.84RR57 pKa = 11.84SRR59 pKa = 11.84PASTTTRR66 pKa = 11.84VMLVRR71 pKa = 11.84TSRR74 pKa = 11.84RR75 pKa = 11.84RR76 pKa = 11.84RR77 pKa = 11.84RR78 pKa = 3.32

Molecular weight: 9.12 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

36

1

37

12846

52

1306

347.2

39.03

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.964 ± 0.349

1.861 ± 0.277

5.535 ± 0.254

6.274 ± 0.508

4.188 ± 0.249

6.189 ± 0.299

2.258 ± 0.238

4.056 ± 0.18

3.69 ± 0.322

8.765 ± 0.358

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.359 ± 0.162

4.227 ± 0.403

6.547 ± 0.262

3.596 ± 0.251

7.372 ± 0.519

7.216 ± 0.434

6.056 ± 0.398

6.485 ± 0.301

1.347 ± 0.114

4.017 ± 0.277
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski