Ustilaginoidea virens partitivirus 2

Taxonomy: Viruses; Riboviria; Orthornavirae; Pisuviricota; Duplopiviricetes; Durnavirales; Partitiviridae; unclassified Partitiviridae

Average proteome isoelectric point is 6.53

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|S5M8T3|S5M8T3_9VIRU Uncharacterized protein OS=Ustilaginoidea virens partitivirus 2 OX=1415665 PE=4 SV=1
MM1 pKa = 7.36KK2 pKa = 10.65NEE4 pKa = 3.98IAFQPGKK11 pKa = 9.65FSPVIEE17 pKa = 4.17VSQRR21 pKa = 11.84QSGVPAPADD30 pKa = 3.37TSFDD34 pKa = 3.48GLEE37 pKa = 4.1EE38 pKa = 4.19VALTTLQVATSSARR52 pKa = 11.84GSGAVIQDD60 pKa = 3.71SVPLSKK66 pKa = 10.87LSMVIGYY73 pKa = 9.11LLAARR78 pKa = 11.84NIAEE82 pKa = 3.96QLLFIGVSTRR92 pKa = 11.84MSTPLRR98 pKa = 11.84APNGNFLEE106 pKa = 5.13PIVRR110 pKa = 11.84AYY112 pKa = 11.01NFYY115 pKa = 11.14GHH117 pKa = 6.84FEE119 pKa = 4.33HH120 pKa = 7.35EE121 pKa = 4.6SKK123 pKa = 9.93TFVTRR128 pKa = 11.84GLEE131 pKa = 4.09TLFIRR136 pKa = 11.84YY137 pKa = 8.79LFGLRR142 pKa = 11.84QFATTGVSDD151 pKa = 4.61GSAHH155 pKa = 5.0TVRR158 pKa = 11.84VLSNQNHH165 pKa = 5.62NFSDD169 pKa = 3.5IDD171 pKa = 3.86LDD173 pKa = 4.46FYY175 pKa = 11.55YY176 pKa = 10.64LSEE179 pKa = 5.01AGEE182 pKa = 3.99IAFGKK187 pKa = 10.1RR188 pKa = 11.84YY189 pKa = 8.78PLKK192 pKa = 10.01EE193 pKa = 3.95YY194 pKa = 10.48LIHH197 pKa = 5.8LVKK200 pKa = 10.64YY201 pKa = 10.42ASDD204 pKa = 3.57FGDD207 pKa = 3.17VDD209 pKa = 3.4EE210 pKa = 6.36RR211 pKa = 11.84IPLLQRR217 pKa = 11.84ILDD220 pKa = 3.76VTTEE224 pKa = 4.11DD225 pKa = 4.42GLNQFLRR232 pKa = 11.84YY233 pKa = 9.57ARR235 pKa = 11.84RR236 pKa = 11.84LPDD239 pKa = 2.97WQTPPRR245 pKa = 11.84EE246 pKa = 4.16FTPDD250 pKa = 3.22PSDD253 pKa = 3.21KK254 pKa = 10.59HH255 pKa = 6.76KK256 pKa = 11.32SAMKK260 pKa = 9.87EE261 pKa = 3.92LFGAAYY267 pKa = 8.26STAGQSIPVSKK278 pKa = 9.42FTEE281 pKa = 4.71SINLAYY287 pKa = 10.45ALLRR291 pKa = 11.84RR292 pKa = 11.84VSLEE296 pKa = 3.48RR297 pKa = 11.84QYY299 pKa = 12.08GMKK302 pKa = 9.41TVQIPRR308 pKa = 11.84YY309 pKa = 8.61EE310 pKa = 4.43GGSPSQMASYY320 pKa = 10.69QDD322 pKa = 4.16DD323 pKa = 4.1VLFSTIPLSLADD335 pKa = 3.38STAAVGFTTSYY346 pKa = 11.25GSLARR351 pKa = 11.84YY352 pKa = 7.09TSAPGFEE359 pKa = 4.16KK360 pKa = 10.91DD361 pKa = 3.32EE362 pKa = 4.27LVRR365 pKa = 11.84EE366 pKa = 4.33LVSQSLVLRR375 pKa = 4.52

Molecular weight: 41.67 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|S5M8T3|S5M8T3_9VIRU Uncharacterized protein OS=Ustilaginoidea virens partitivirus 2 OX=1415665 PE=4 SV=1
MM1 pKa = 7.69NSFEE5 pKa = 4.45NFGSFKK11 pKa = 10.93LSADD15 pKa = 3.55EE16 pKa = 4.4LAATAVPPTPWNNVFRR32 pKa = 11.84YY33 pKa = 8.37ITDD36 pKa = 3.46AKK38 pKa = 10.39RR39 pKa = 11.84FPGYY43 pKa = 10.11KK44 pKa = 9.48RR45 pKa = 11.84GILRR49 pKa = 11.84QTQLYY54 pKa = 9.83DD55 pKa = 3.7PYY57 pKa = 11.55VNAALKK63 pKa = 10.55SFSPEE68 pKa = 3.48LHH70 pKa = 7.06DD71 pKa = 5.46SIKK74 pKa = 10.73GYY76 pKa = 8.53TRR78 pKa = 11.84APGDD82 pKa = 3.09EE83 pKa = 3.73WDD85 pKa = 3.64VYY87 pKa = 11.14EE88 pKa = 5.59RR89 pKa = 11.84LTRR92 pKa = 11.84YY93 pKa = 9.63DD94 pKa = 3.87KK95 pKa = 11.54SPLAPVDD102 pKa = 3.38NPRR105 pKa = 11.84FKK107 pKa = 10.92ACYY110 pKa = 9.41DD111 pKa = 3.45AALSDD116 pKa = 3.61VMKK119 pKa = 10.23EE120 pKa = 4.01FKK122 pKa = 10.77LRR124 pKa = 11.84DD125 pKa = 3.48PVVPHH130 pKa = 7.26WILDD134 pKa = 3.42VDD136 pKa = 4.35LVKK139 pKa = 10.22NTSSGFPHH147 pKa = 6.64FTRR150 pKa = 11.84KK151 pKa = 9.94GDD153 pKa = 3.35ILDD156 pKa = 3.89QIRR159 pKa = 11.84QEE161 pKa = 4.32GRR163 pKa = 11.84SHH165 pKa = 6.46FHH167 pKa = 5.97LLKK170 pKa = 10.56RR171 pKa = 11.84LPLWRR176 pKa = 11.84VPLLPCTPATRR187 pKa = 11.84GGLADD192 pKa = 3.06ITEE195 pKa = 4.47PKK197 pKa = 9.07TRR199 pKa = 11.84LVWMYY204 pKa = 8.82PAAMTAVEE212 pKa = 4.79AVFAQPLIDD221 pKa = 4.11GLFSEE226 pKa = 4.64KK227 pKa = 10.41SEE229 pKa = 3.94YY230 pKa = 10.82LITGVDD236 pKa = 3.35TKK238 pKa = 11.16HH239 pKa = 6.82RR240 pKa = 11.84IQRR243 pKa = 11.84YY244 pKa = 8.99LSLLSEE250 pKa = 4.23DD251 pKa = 3.44TGRR254 pKa = 11.84LGVGLDD260 pKa = 3.73FKK262 pKa = 11.63SFDD265 pKa = 3.58TLRR268 pKa = 11.84CNWLIRR274 pKa = 11.84DD275 pKa = 3.82AFDD278 pKa = 3.26VLKK281 pKa = 10.97QNVYY285 pKa = 10.23FSGYY289 pKa = 10.28YY290 pKa = 10.28DD291 pKa = 3.93DD292 pKa = 5.31TNGLQTFGPGKK303 pKa = 8.11TEE305 pKa = 3.93RR306 pKa = 11.84LEE308 pKa = 4.3HH309 pKa = 5.8AWSNIVEE316 pKa = 4.36YY317 pKa = 10.07FIHH320 pKa = 6.56TPILLPNGRR329 pKa = 11.84CVNKK333 pKa = 9.15HH334 pKa = 5.06TGVPSGSHH342 pKa = 4.96FTNLIDD348 pKa = 5.71SIICRR353 pKa = 11.84ILIKK357 pKa = 10.0TFSLYY362 pKa = 10.67CSIPISNLRR371 pKa = 11.84TNGDD375 pKa = 3.28DD376 pKa = 3.77SAFHH380 pKa = 6.83VYY382 pKa = 10.22EE383 pKa = 5.59DD384 pKa = 3.92YY385 pKa = 11.42ASDD388 pKa = 3.95IILRR392 pKa = 11.84AAGFFKK398 pKa = 10.6EE399 pKa = 4.32FFGMTINTDD408 pKa = 3.36KK409 pKa = 11.28SCVAGSPSEE418 pKa = 3.93MHH420 pKa = 6.3VSGTRR425 pKa = 11.84WTGLRR430 pKa = 11.84PTRR433 pKa = 11.84STQEE437 pKa = 3.45WMMLAAYY444 pKa = 9.87GEE446 pKa = 4.64TYY448 pKa = 10.91SRR450 pKa = 11.84IPFDD454 pKa = 3.25SFQRR458 pKa = 11.84LLGLGLSGGFGDD470 pKa = 3.94STFTRR475 pKa = 11.84FFDD478 pKa = 3.97YY479 pKa = 10.6FQTGYY484 pKa = 10.96DD485 pKa = 3.78CRR487 pKa = 11.84HH488 pKa = 6.07GPNLLNWKK496 pKa = 9.6KK497 pKa = 10.64LRR499 pKa = 11.84FLQQIFSIEE508 pKa = 4.12EE509 pKa = 3.82LPLVYY514 pKa = 10.25KK515 pKa = 10.72QGAKK519 pKa = 6.04TTLRR523 pKa = 11.84LRR525 pKa = 11.84LLVTT529 pKa = 4.34

Molecular weight: 60.37 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

904

375

529

452.0

51.02

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.527 ± 0.918

0.885 ± 0.551

5.973 ± 0.565

4.867 ± 0.623

6.305 ± 0.273

6.858 ± 0.119

2.102 ± 0.313

4.867 ± 0.208

4.314 ± 0.528

10.73 ± 0.04

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.549 ± 0.032

3.208 ± 0.337

5.531 ± 0.123

3.429 ± 0.688

6.637 ± 0.148

8.075 ± 1.116

6.858 ± 0.286

5.642 ± 0.639

1.217 ± 0.592

4.425 ± 0.068
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski