Lutibacter oricola

Taxonomy: cellular organisms; Bacteria; FCB group; Bacteroidetes/Chlorobi group; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Lutibacter

Average proteome isoelectric point is 6.88

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3464 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1H3G2N9|A0A1H3G2N9_9FLAO Uncharacterized protein OS=Lutibacter oricola OX=762486 GN=SAMN05444411_11311 PE=4 SV=1
MM1 pKa = 7.21KK2 pKa = 10.09QIKK5 pKa = 9.53YY6 pKa = 9.77LISAIFLFAAVWSCTEE22 pKa = 4.39DD23 pKa = 3.34EE24 pKa = 4.98LGNADD29 pKa = 4.07FVDD32 pKa = 4.66TIVAPTEE39 pKa = 3.78VSAMFNVTQDD49 pKa = 3.05NTGLVTIAPTSQGAVTYY66 pKa = 9.59TVDD69 pKa = 4.72LGDD72 pKa = 4.04GSDD75 pKa = 4.98PITLKK80 pKa = 10.61QGEE83 pKa = 4.53SIKK86 pKa = 11.08NIFAEE91 pKa = 4.36GEE93 pKa = 4.29YY94 pKa = 9.97QVKK97 pKa = 8.32ITAIGVTGLTTSVTLPLVVSFKK119 pKa = 10.96APEE122 pKa = 3.95NLVVEE127 pKa = 4.58ILNDD131 pKa = 3.52EE132 pKa = 4.38AVSKK136 pKa = 10.12QVNVTATADD145 pKa = 3.34NAINFDD151 pKa = 3.71VYY153 pKa = 10.91FGVEE157 pKa = 4.42GVTEE161 pKa = 5.45PITGVIGEE169 pKa = 4.6TVSYY173 pKa = 9.98VYY175 pKa = 9.76PEE177 pKa = 4.0PGIYY181 pKa = 8.99TIKK184 pKa = 10.68VVAKK188 pKa = 9.34GAAIEE193 pKa = 4.1TTEE196 pKa = 4.11YY197 pKa = 10.41IEE199 pKa = 4.13EE200 pKa = 4.37FEE202 pKa = 4.27VTEE205 pKa = 4.19IEE207 pKa = 4.36EE208 pKa = 4.44PLEE211 pKa = 4.26KK212 pKa = 10.72APTPPYY218 pKa = 9.94RR219 pKa = 11.84NEE221 pKa = 3.7VDD223 pKa = 3.72VVSIFSDD230 pKa = 3.6AYY232 pKa = 9.68TNITVNEE239 pKa = 4.18WNPGWGQSTTLTDD252 pKa = 4.11FEE254 pKa = 4.81VDD256 pKa = 2.88GDD258 pKa = 4.38NILKK262 pKa = 10.3YY263 pKa = 10.93DD264 pKa = 3.88FLNYY268 pKa = 9.57TGIVTDD274 pKa = 4.05YY275 pKa = 11.6DD276 pKa = 3.71NPTNLAQMEE285 pKa = 4.6FVHH288 pKa = 6.97FDD290 pKa = 2.94YY291 pKa = 8.2WTNDD295 pKa = 3.26AEE297 pKa = 4.41SLSLKK302 pKa = 10.02IVNTSQADD310 pKa = 3.68GTPEE314 pKa = 4.0KK315 pKa = 10.18EE316 pKa = 4.03SEE318 pKa = 4.14IAVGDD323 pKa = 3.53ITAGEE328 pKa = 4.24WVSVEE333 pKa = 3.96IPLSDD338 pKa = 3.43FTTNMSGVTQFLFVSNGVTVFIDD361 pKa = 2.92NFYY364 pKa = 10.58FYY366 pKa = 10.54KK367 pKa = 10.6QPTTVSEE374 pKa = 4.74GIVGVWKK381 pKa = 9.96LAPIAGALKK390 pKa = 10.55VGPNPNDD397 pKa = 3.61GSWWANSAEE406 pKa = 4.28DD407 pKa = 3.64VTGRR411 pKa = 11.84DD412 pKa = 3.72CLFDD416 pKa = 4.1DD417 pKa = 4.87SYY419 pKa = 12.23VFGADD424 pKa = 3.15GTFKK428 pKa = 11.11NILDD432 pKa = 3.73GSTWVEE438 pKa = 4.16GWQGGSDD445 pKa = 3.49SCATPVAPHH454 pKa = 7.12DD455 pKa = 4.31GSNPATFVYY464 pKa = 10.57DD465 pKa = 3.86EE466 pKa = 4.64AAGKK470 pKa = 8.14VTLNGLGAYY479 pKa = 10.31LGIPKK484 pKa = 10.13AYY486 pKa = 10.23DD487 pKa = 3.39GGEE490 pKa = 4.1LGSPADD496 pKa = 3.88APSAINYY503 pKa = 8.19DD504 pKa = 3.54VTLSNNDD511 pKa = 2.84SAMTVVVNIGSGYY524 pKa = 6.42WTFEE528 pKa = 4.0LVKK531 pKa = 10.44DD532 pKa = 4.14GAPAYY537 pKa = 10.64SPLEE541 pKa = 4.18GTWVVAPEE549 pKa = 4.17AGSLGVGPGQGDD561 pKa = 3.95TSWWTIDD568 pKa = 3.33AAGVTQRR575 pKa = 11.84ACFFDD580 pKa = 3.59DD581 pKa = 3.65TFVFGADD588 pKa = 3.13GSFMNVLGADD598 pKa = 3.29TWIEE602 pKa = 4.03GWQGGTDD609 pKa = 3.19ACGVPVAPHH618 pKa = 7.12DD619 pKa = 4.08GMNPATYY626 pKa = 8.88TYY628 pKa = 11.11DD629 pKa = 3.43EE630 pKa = 4.61AAGKK634 pKa = 8.45LTLNGIGAYY643 pKa = 10.34LGIPKK648 pKa = 10.01AYY650 pKa = 10.5NEE652 pKa = 4.74GEE654 pKa = 4.16LASPADD660 pKa = 3.83APASITYY667 pKa = 10.43DD668 pKa = 3.18VTLANNDD675 pKa = 3.09SEE677 pKa = 4.61MTVDD681 pKa = 3.02IWVGGDD687 pKa = 2.88AWWRR691 pKa = 11.84FKK693 pKa = 9.91MVKK696 pKa = 9.95EE697 pKa = 4.35GTSTGGGSGTGGGTSSGTQIDD718 pKa = 4.35LPVDD722 pKa = 4.38FEE724 pKa = 4.7SATIDD729 pKa = 3.37YY730 pKa = 8.23TLTDD734 pKa = 3.71FGEE737 pKa = 4.35NLSSIVEE744 pKa = 4.3DD745 pKa = 3.57PTNASNTVAKK755 pKa = 10.16VVKK758 pKa = 8.93TAAATTWAGTTIGTDD773 pKa = 2.73TGFATNIPISLTNSIITVRR792 pKa = 11.84VWSPDD797 pKa = 2.49AGAPIRR803 pKa = 11.84LKK805 pKa = 10.58IEE807 pKa = 4.3DD808 pKa = 4.59ANDD811 pKa = 3.39ATHH814 pKa = 5.87TCEE817 pKa = 4.24TEE819 pKa = 4.06VNTTVAGGWEE829 pKa = 4.17TIEE832 pKa = 5.57FDD834 pKa = 4.13FTNQATGTEE843 pKa = 4.23LLSVGLDD850 pKa = 3.27NGWVYY855 pKa = 11.43NKK857 pKa = 10.7ASIFFNFGTDD867 pKa = 3.04GATAGEE873 pKa = 4.0KK874 pKa = 9.59TYY876 pKa = 11.21YY877 pKa = 10.01FDD879 pKa = 6.31DD880 pKa = 4.63VIFINNN886 pKa = 3.32

Molecular weight: 94.28 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1H2Z930|A0A1H2Z930_9FLAO Nitroreductase OS=Lutibacter oricola OX=762486 GN=SAMN05444411_103179 PE=4 SV=1
MM1 pKa = 7.54SVRR4 pKa = 11.84KK5 pKa = 9.68LKK7 pKa = 10.5PITPGQRR14 pKa = 11.84FRR16 pKa = 11.84VVNGFDD22 pKa = 5.49AITTDD27 pKa = 3.56KK28 pKa = 11.07PEE30 pKa = 4.39KK31 pKa = 10.55SLLAPKK37 pKa = 9.91KK38 pKa = 10.38RR39 pKa = 11.84SGGRR43 pKa = 11.84NNKK46 pKa = 9.29GKK48 pKa = 8.29MTMRR52 pKa = 11.84YY53 pKa = 9.26IGGGHH58 pKa = 6.45KK59 pKa = 9.63KK60 pKa = 9.44HH61 pKa = 6.1YY62 pKa = 10.08RR63 pKa = 11.84IIDD66 pKa = 3.83FKK68 pKa = 10.83RR69 pKa = 11.84NKK71 pKa = 9.58HH72 pKa = 5.09GVPATVKK79 pKa = 10.58SIEE82 pKa = 4.0YY83 pKa = 10.15DD84 pKa = 3.43PNRR87 pKa = 11.84TAFIALLNYY96 pKa = 10.38ADD98 pKa = 3.65GEE100 pKa = 4.2KK101 pKa = 10.21RR102 pKa = 11.84YY103 pKa = 10.74VIAQNGLKK111 pKa = 10.38AGQTVISGEE120 pKa = 4.13GATPDD125 pKa = 3.47VGNTMLLSEE134 pKa = 4.99IPLGTTISCIEE145 pKa = 3.88LHH147 pKa = 6.73PGQGAVIARR156 pKa = 11.84SAGSFAQLMARR167 pKa = 11.84EE168 pKa = 4.45GKK170 pKa = 10.09YY171 pKa = 9.05ATIKK175 pKa = 10.52LPSGEE180 pKa = 4.19TRR182 pKa = 11.84LILLTCSATIGVVSNSDD199 pKa = 3.21HH200 pKa = 6.09QLLVSGKK207 pKa = 9.87AGRR210 pKa = 11.84TRR212 pKa = 11.84WLGRR216 pKa = 11.84RR217 pKa = 11.84PRR219 pKa = 11.84TRR221 pKa = 11.84PVVMNPVDD229 pKa = 3.47HH230 pKa = 7.05PMGGGEE236 pKa = 4.28GKK238 pKa = 10.51SSGGHH243 pKa = 4.59PRR245 pKa = 11.84SRR247 pKa = 11.84NGIPAKK253 pKa = 10.41GFKK256 pKa = 9.24TRR258 pKa = 11.84SKK260 pKa = 9.37TKK262 pKa = 10.4ASNKK266 pKa = 9.95YY267 pKa = 9.56IIEE270 pKa = 4.06RR271 pKa = 11.84RR272 pKa = 11.84KK273 pKa = 10.1KK274 pKa = 9.82

Molecular weight: 29.78 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3464

0

3464

1260383

25

6593

363.9

41.1

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.891 ± 0.042

0.772 ± 0.014

5.279 ± 0.037

6.73 ± 0.043

5.208 ± 0.034

6.35 ± 0.038

1.657 ± 0.019

8.206 ± 0.039

8.719 ± 0.069

8.936 ± 0.047

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.068 ± 0.022

6.929 ± 0.046

3.25 ± 0.026

2.974 ± 0.021

2.979 ± 0.024

6.61 ± 0.036

5.852 ± 0.059

6.324 ± 0.04

1.132 ± 0.016

4.134 ± 0.028
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski