Catenovulum maritimum

Taxonomy: cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Catenovulum

Average proteome isoelectric point is 6.19

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3470 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0J8GYT1|A0A0J8GYT1_9ALTE Uncharacterized protein OS=Catenovulum maritimum OX=1513271 GN=XM47_06780 PE=4 SV=1
MM1 pKa = 7.65NKK3 pKa = 9.97RR4 pKa = 11.84KK5 pKa = 9.72LLNAAIGTALLTTASFAQADD25 pKa = 4.47MILGLYY31 pKa = 10.49AGGQIWNVEE40 pKa = 4.13PEE42 pKa = 4.12GSFDD46 pKa = 4.5KK47 pKa = 11.52NGDD50 pKa = 3.73DD51 pKa = 3.99FQGSFDD57 pKa = 4.72FDD59 pKa = 4.49SDD61 pKa = 4.12TQGTLYY67 pKa = 10.63VALEE71 pKa = 4.18HH72 pKa = 6.91PIPLIPNVKK81 pKa = 9.71LRR83 pKa = 11.84QTDD86 pKa = 4.06LEE88 pKa = 4.53VKK90 pKa = 9.31GTGEE94 pKa = 3.62ITGEE98 pKa = 4.21LFGQPYY104 pKa = 10.51SGTTNVMGDD113 pKa = 4.39LSHH116 pKa = 7.3TDD118 pKa = 3.0YY119 pKa = 10.98TLYY122 pKa = 11.3YY123 pKa = 9.98EE124 pKa = 4.78IFDD127 pKa = 4.04NGLVSFDD134 pKa = 3.92FGITVKK140 pKa = 10.85DD141 pKa = 3.01IDD143 pKa = 4.94ANIQADD149 pKa = 4.3GEE151 pKa = 4.44SDD153 pKa = 3.14ASSRR157 pKa = 11.84STTNEE162 pKa = 3.65SFSGYY167 pKa = 10.54VPMGYY172 pKa = 9.55VAAEE176 pKa = 3.74IGLPFTGLSVYY187 pKa = 11.1GDD189 pKa = 3.78VNMLAIGDD197 pKa = 4.21HH198 pKa = 6.25SLVDD202 pKa = 3.75YY203 pKa = 10.75QVGVAYY209 pKa = 10.47ALLDD213 pKa = 4.36NIAVDD218 pKa = 4.66LDD220 pKa = 3.7VQLGYY225 pKa = 10.88RR226 pKa = 11.84SFSLKK231 pKa = 10.52LDD233 pKa = 4.15DD234 pKa = 6.15LDD236 pKa = 6.58DD237 pKa = 4.59INTDD241 pKa = 3.38LDD243 pKa = 3.86FSGVYY248 pKa = 10.27AGLEE252 pKa = 3.84VHH254 pKa = 6.97FF255 pKa = 5.33

Molecular weight: 27.6 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0J8JN69|A0A0J8JN69_9ALTE Uncharacterized protein OS=Catenovulum maritimum OX=1513271 GN=XM47_06255 PE=4 SV=1
MM1 pKa = 7.45KK2 pKa = 9.61RR3 pKa = 11.84TFQPSNLKK11 pKa = 10.16RR12 pKa = 11.84KK13 pKa = 9.08RR14 pKa = 11.84NHH16 pKa = 5.37GFRR19 pKa = 11.84ARR21 pKa = 11.84MATKK25 pKa = 10.22SGRR28 pKa = 11.84QILARR33 pKa = 11.84RR34 pKa = 11.84RR35 pKa = 11.84AKK37 pKa = 10.11GRR39 pKa = 11.84KK40 pKa = 8.16EE41 pKa = 3.63LSAA44 pKa = 4.99

Molecular weight: 5.2 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3470

0

3470

1245000

44

3740

358.8

40.03

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.122 ± 0.042

0.939 ± 0.012

5.756 ± 0.039

6.192 ± 0.038

4.346 ± 0.024

6.243 ± 0.046

2.058 ± 0.02

6.97 ± 0.032

6.199 ± 0.051

10.085 ± 0.05

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.153 ± 0.02

5.244 ± 0.037

3.621 ± 0.022

4.817 ± 0.039

3.73 ± 0.023

7.037 ± 0.038

5.507 ± 0.046

6.392 ± 0.04

1.253 ± 0.014

3.338 ± 0.025
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski