Wenzhou shrimp virus 10

Taxonomy: Viruses; Riboviria; unclassified Riboviria; unclassified RNA viruses ShiM-2016

Average proteome isoelectric point is 8.5

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 1 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1L3KIL9|A0A1L3KIL9_9VIRU RNA-dependent RNA polymerase OS=Wenzhou shrimp virus 10 OX=1923649 PE=4 SV=1
MM1 pKa = 7.17STLDD5 pKa = 3.44TYY7 pKa = 11.79ANCIRR12 pKa = 11.84VWHH15 pKa = 5.92QINFKK20 pKa = 10.86GKK22 pKa = 9.91FSFHH26 pKa = 6.55LKK28 pKa = 9.78SQLSHH33 pKa = 5.7FQRR36 pKa = 11.84VFSPYY41 pKa = 9.47PQKK44 pKa = 10.41QWPKK48 pKa = 9.65IFKK51 pKa = 10.41GLLAHH56 pKa = 6.96KK57 pKa = 9.69FSVIHH62 pKa = 5.31EE63 pKa = 4.24QEE65 pKa = 4.14LPEE68 pKa = 4.33VIMDD72 pKa = 4.31SKK74 pKa = 11.32HH75 pKa = 6.12LFYY78 pKa = 10.38PQYY81 pKa = 10.05HH82 pKa = 5.96RR83 pKa = 11.84RR84 pKa = 11.84IHH86 pKa = 6.29SYY88 pKa = 10.68VVTKK92 pKa = 10.66YY93 pKa = 10.76DD94 pKa = 3.21EE95 pKa = 4.17EE96 pKa = 4.69RR97 pKa = 11.84LVRR100 pKa = 11.84VFWDD104 pKa = 3.71LMQTKK109 pKa = 9.9ALAARR114 pKa = 11.84VPDD117 pKa = 4.07SFIKK121 pKa = 10.62DD122 pKa = 3.33ALVKK126 pKa = 10.61HH127 pKa = 6.36SEE129 pKa = 4.32TVGQVTSTDD138 pKa = 3.49PAVLEE143 pKa = 4.42KK144 pKa = 10.16FAKK147 pKa = 10.0FCEE150 pKa = 4.29PFMKK154 pKa = 9.55RR155 pKa = 11.84TGMLLSQQYY164 pKa = 11.11AGLPKK169 pKa = 10.35NHH171 pKa = 7.02ASYY174 pKa = 10.67EE175 pKa = 4.27FKK177 pKa = 10.67RR178 pKa = 11.84GLGGVGRR185 pKa = 11.84SYY187 pKa = 11.05KK188 pKa = 10.07SSYY191 pKa = 10.21MNVTQPSQPRR201 pKa = 11.84LDD203 pKa = 5.22PITILVSGEE212 pKa = 4.02PGCGKK217 pKa = 10.34SLLQNKK223 pKa = 8.9IASKK227 pKa = 10.27LAARR231 pKa = 11.84LDD233 pKa = 3.72RR234 pKa = 11.84SLSEE238 pKa = 3.84TVYY241 pKa = 10.61VRR243 pKa = 11.84NSSTRR248 pKa = 11.84HH249 pKa = 4.31WDD251 pKa = 3.53GYY253 pKa = 9.15KK254 pKa = 9.65QQPLAMIDD262 pKa = 4.57DD263 pKa = 4.99FLQTSHH269 pKa = 6.52KK270 pKa = 10.53QSTEE274 pKa = 3.61PLEE277 pKa = 4.23AEE279 pKa = 4.27EE280 pKa = 5.83FITLNSTCDD289 pKa = 3.37HH290 pKa = 6.32VLPMADD296 pKa = 3.52LRR298 pKa = 11.84EE299 pKa = 3.97KK300 pKa = 10.88GMRR303 pKa = 11.84FTSPIILYY311 pKa = 10.16SSNHH315 pKa = 6.32SYY317 pKa = 10.23HH318 pKa = 5.9QATGKK323 pKa = 10.41LSRR326 pKa = 11.84QLHH329 pKa = 6.34SIGAICRR336 pKa = 11.84RR337 pKa = 11.84IKK339 pKa = 10.58FYY341 pKa = 10.56IEE343 pKa = 3.28KK344 pKa = 10.45RR345 pKa = 11.84AGKK348 pKa = 9.03WILFKK353 pKa = 10.72DD354 pKa = 4.18VPSDD358 pKa = 2.92IPGRR362 pKa = 11.84VRR364 pKa = 11.84TAFDD368 pKa = 3.63RR369 pKa = 11.84VCDD372 pKa = 4.2CGQEE376 pKa = 4.11TSINGAPSHH385 pKa = 6.03GRR387 pKa = 11.84SSVRR391 pKa = 11.84VLSSNLLHH399 pKa = 6.99KK400 pKa = 10.26FAEE403 pKa = 4.22QVVDD407 pKa = 3.42ILLGEE412 pKa = 4.08WEE414 pKa = 4.49RR415 pKa = 11.84RR416 pKa = 11.84CIFYY420 pKa = 10.76DD421 pKa = 3.37NNIAEE426 pKa = 5.02GYY428 pKa = 9.08SRR430 pKa = 11.84VPIGPGVSARR440 pKa = 11.84FEE442 pKa = 4.32PVSKK446 pKa = 9.53PHH448 pKa = 6.01NRR450 pKa = 11.84VKK452 pKa = 10.52VVPLTEE458 pKa = 4.09PLKK461 pKa = 11.01VRR463 pKa = 11.84TITVGTAEE471 pKa = 4.33NFLLKK476 pKa = 10.14PLQKK480 pKa = 10.96ALLQSLKK487 pKa = 10.58GYY489 pKa = 10.52AQFKK493 pKa = 10.25PCFDD497 pKa = 4.92PNYY500 pKa = 9.88QDD502 pKa = 4.81QIDD505 pKa = 4.06SLRR508 pKa = 11.84LRR510 pKa = 11.84EE511 pKa = 4.13GLWLSGDD518 pKa = 3.74YY519 pKa = 10.64TSATDD524 pKa = 4.95GLHH527 pKa = 6.26QDD529 pKa = 4.25LFHH532 pKa = 7.22AGLSSLEE539 pKa = 4.18SYY541 pKa = 10.47IPEE544 pKa = 4.22NLWNLVKK551 pKa = 10.55RR552 pKa = 11.84EE553 pKa = 4.18MEE555 pKa = 3.97PHH557 pKa = 5.69LCEE560 pKa = 4.43YY561 pKa = 8.65PPEE564 pKa = 4.14MGIPDD569 pKa = 4.02CWQTNGQLMGSLLSFPLLCLANAFTLSHH597 pKa = 5.99TMGKK601 pKa = 9.25PVGKK605 pKa = 10.27LPALFHH611 pKa = 7.3GDD613 pKa = 3.59DD614 pKa = 4.5LLAKK618 pKa = 7.31VTPRR622 pKa = 11.84EE623 pKa = 3.92YY624 pKa = 10.39EE625 pKa = 3.57AWKK628 pKa = 10.48AFCPTIGLSLSVGKK642 pKa = 10.48NYY644 pKa = 9.95VSPNWGSIDD653 pKa = 3.43SQVFYY658 pKa = 10.71QGRR661 pKa = 11.84CLGTGKK667 pKa = 10.5FGALSAGHH675 pKa = 5.62TQSIPTLIRR684 pKa = 11.84RR685 pKa = 11.84GVPKK689 pKa = 10.61GLIVSIFKK697 pKa = 10.74KK698 pKa = 10.25EE699 pKa = 3.96LEE701 pKa = 4.13KK702 pKa = 10.47TPRR705 pKa = 11.84SLDD708 pKa = 3.29VSHH711 pKa = 7.27LYY713 pKa = 10.78GGLGQDD719 pKa = 4.84GLPQTDD725 pKa = 4.37LDD727 pKa = 3.83FQVYY731 pKa = 8.57HH732 pKa = 6.77RR733 pKa = 11.84KK734 pKa = 8.89IARR737 pKa = 11.84TFVRR741 pKa = 11.84RR742 pKa = 11.84DD743 pKa = 3.21MRR745 pKa = 11.84DD746 pKa = 2.31IGYY749 pKa = 10.1VYY751 pKa = 10.28TIDD754 pKa = 3.68RR755 pKa = 11.84SYY757 pKa = 11.76SNSLPAGCVPSEE769 pKa = 4.05IPEE772 pKa = 4.27DD773 pKa = 3.91AEE775 pKa = 4.43SKK777 pKa = 10.5RR778 pKa = 11.84VSDD781 pKa = 3.45WKK783 pKa = 10.76GIKK786 pKa = 9.83HH787 pKa = 6.26FSSKK791 pKa = 10.83APATIRR797 pKa = 11.84VTDD800 pKa = 5.29PITVFSRR807 pKa = 11.84KK808 pKa = 8.61PAPVLEE814 pKa = 3.82NLVRR818 pKa = 11.84HH819 pKa = 5.73SRR821 pKa = 11.84ADD823 pKa = 3.47CTVSLDD829 pKa = 4.31EE830 pKa = 5.43IDD832 pKa = 3.75FF833 pKa = 4.33

Molecular weight: 94.2 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1L3KIL9|A0A1L3KIL9_9VIRU RNA-dependent RNA polymerase OS=Wenzhou shrimp virus 10 OX=1923649 PE=4 SV=1
MM1 pKa = 7.17STLDD5 pKa = 3.44TYY7 pKa = 11.79ANCIRR12 pKa = 11.84VWHH15 pKa = 5.92QINFKK20 pKa = 10.86GKK22 pKa = 9.91FSFHH26 pKa = 6.55LKK28 pKa = 9.78SQLSHH33 pKa = 5.7FQRR36 pKa = 11.84VFSPYY41 pKa = 9.47PQKK44 pKa = 10.41QWPKK48 pKa = 9.65IFKK51 pKa = 10.41GLLAHH56 pKa = 6.96KK57 pKa = 9.69FSVIHH62 pKa = 5.31EE63 pKa = 4.24QEE65 pKa = 4.14LPEE68 pKa = 4.33VIMDD72 pKa = 4.31SKK74 pKa = 11.32HH75 pKa = 6.12LFYY78 pKa = 10.38PQYY81 pKa = 10.05HH82 pKa = 5.96RR83 pKa = 11.84RR84 pKa = 11.84IHH86 pKa = 6.29SYY88 pKa = 10.68VVTKK92 pKa = 10.66YY93 pKa = 10.76DD94 pKa = 3.21EE95 pKa = 4.17EE96 pKa = 4.69RR97 pKa = 11.84LVRR100 pKa = 11.84VFWDD104 pKa = 3.71LMQTKK109 pKa = 9.9ALAARR114 pKa = 11.84VPDD117 pKa = 4.07SFIKK121 pKa = 10.62DD122 pKa = 3.33ALVKK126 pKa = 10.61HH127 pKa = 6.36SEE129 pKa = 4.32TVGQVTSTDD138 pKa = 3.49PAVLEE143 pKa = 4.42KK144 pKa = 10.16FAKK147 pKa = 10.0FCEE150 pKa = 4.29PFMKK154 pKa = 9.55RR155 pKa = 11.84TGMLLSQQYY164 pKa = 11.11AGLPKK169 pKa = 10.35NHH171 pKa = 7.02ASYY174 pKa = 10.67EE175 pKa = 4.27FKK177 pKa = 10.67RR178 pKa = 11.84GLGGVGRR185 pKa = 11.84SYY187 pKa = 11.05KK188 pKa = 10.07SSYY191 pKa = 10.21MNVTQPSQPRR201 pKa = 11.84LDD203 pKa = 5.22PITILVSGEE212 pKa = 4.02PGCGKK217 pKa = 10.34SLLQNKK223 pKa = 8.9IASKK227 pKa = 10.27LAARR231 pKa = 11.84LDD233 pKa = 3.72RR234 pKa = 11.84SLSEE238 pKa = 3.84TVYY241 pKa = 10.61VRR243 pKa = 11.84NSSTRR248 pKa = 11.84HH249 pKa = 4.31WDD251 pKa = 3.53GYY253 pKa = 9.15KK254 pKa = 9.65QQPLAMIDD262 pKa = 4.57DD263 pKa = 4.99FLQTSHH269 pKa = 6.52KK270 pKa = 10.53QSTEE274 pKa = 3.61PLEE277 pKa = 4.23AEE279 pKa = 4.27EE280 pKa = 5.83FITLNSTCDD289 pKa = 3.37HH290 pKa = 6.32VLPMADD296 pKa = 3.52LRR298 pKa = 11.84EE299 pKa = 3.97KK300 pKa = 10.88GMRR303 pKa = 11.84FTSPIILYY311 pKa = 10.16SSNHH315 pKa = 6.32SYY317 pKa = 10.23HH318 pKa = 5.9QATGKK323 pKa = 10.41LSRR326 pKa = 11.84QLHH329 pKa = 6.34SIGAICRR336 pKa = 11.84RR337 pKa = 11.84IKK339 pKa = 10.58FYY341 pKa = 10.56IEE343 pKa = 3.28KK344 pKa = 10.45RR345 pKa = 11.84AGKK348 pKa = 9.03WILFKK353 pKa = 10.72DD354 pKa = 4.18VPSDD358 pKa = 2.92IPGRR362 pKa = 11.84VRR364 pKa = 11.84TAFDD368 pKa = 3.63RR369 pKa = 11.84VCDD372 pKa = 4.2CGQEE376 pKa = 4.11TSINGAPSHH385 pKa = 6.03GRR387 pKa = 11.84SSVRR391 pKa = 11.84VLSSNLLHH399 pKa = 6.99KK400 pKa = 10.26FAEE403 pKa = 4.22QVVDD407 pKa = 3.42ILLGEE412 pKa = 4.08WEE414 pKa = 4.49RR415 pKa = 11.84RR416 pKa = 11.84CIFYY420 pKa = 10.76DD421 pKa = 3.37NNIAEE426 pKa = 5.02GYY428 pKa = 9.08SRR430 pKa = 11.84VPIGPGVSARR440 pKa = 11.84FEE442 pKa = 4.32PVSKK446 pKa = 9.53PHH448 pKa = 6.01NRR450 pKa = 11.84VKK452 pKa = 10.52VVPLTEE458 pKa = 4.09PLKK461 pKa = 11.01VRR463 pKa = 11.84TITVGTAEE471 pKa = 4.33NFLLKK476 pKa = 10.14PLQKK480 pKa = 10.96ALLQSLKK487 pKa = 10.58GYY489 pKa = 10.52AQFKK493 pKa = 10.25PCFDD497 pKa = 4.92PNYY500 pKa = 9.88QDD502 pKa = 4.81QIDD505 pKa = 4.06SLRR508 pKa = 11.84LRR510 pKa = 11.84EE511 pKa = 4.13GLWLSGDD518 pKa = 3.74YY519 pKa = 10.64TSATDD524 pKa = 4.95GLHH527 pKa = 6.26QDD529 pKa = 4.25LFHH532 pKa = 7.22AGLSSLEE539 pKa = 4.18SYY541 pKa = 10.47IPEE544 pKa = 4.22NLWNLVKK551 pKa = 10.55RR552 pKa = 11.84EE553 pKa = 4.18MEE555 pKa = 3.97PHH557 pKa = 5.69LCEE560 pKa = 4.43YY561 pKa = 8.65PPEE564 pKa = 4.14MGIPDD569 pKa = 4.02CWQTNGQLMGSLLSFPLLCLANAFTLSHH597 pKa = 5.99TMGKK601 pKa = 9.25PVGKK605 pKa = 10.27LPALFHH611 pKa = 7.3GDD613 pKa = 3.59DD614 pKa = 4.5LLAKK618 pKa = 7.31VTPRR622 pKa = 11.84EE623 pKa = 3.92YY624 pKa = 10.39EE625 pKa = 3.57AWKK628 pKa = 10.48AFCPTIGLSLSVGKK642 pKa = 10.48NYY644 pKa = 9.95VSPNWGSIDD653 pKa = 3.43SQVFYY658 pKa = 10.71QGRR661 pKa = 11.84CLGTGKK667 pKa = 10.5FGALSAGHH675 pKa = 5.62TQSIPTLIRR684 pKa = 11.84RR685 pKa = 11.84GVPKK689 pKa = 10.61GLIVSIFKK697 pKa = 10.74KK698 pKa = 10.25EE699 pKa = 3.96LEE701 pKa = 4.13KK702 pKa = 10.47TPRR705 pKa = 11.84SLDD708 pKa = 3.29VSHH711 pKa = 7.27LYY713 pKa = 10.78GGLGQDD719 pKa = 4.84GLPQTDD725 pKa = 4.37LDD727 pKa = 3.83FQVYY731 pKa = 8.57HH732 pKa = 6.77RR733 pKa = 11.84KK734 pKa = 8.89IARR737 pKa = 11.84TFVRR741 pKa = 11.84RR742 pKa = 11.84DD743 pKa = 3.21MRR745 pKa = 11.84DD746 pKa = 2.31IGYY749 pKa = 10.1VYY751 pKa = 10.28TIDD754 pKa = 3.68RR755 pKa = 11.84SYY757 pKa = 11.76SNSLPAGCVPSEE769 pKa = 4.05IPEE772 pKa = 4.27DD773 pKa = 3.91AEE775 pKa = 4.43SKK777 pKa = 10.5RR778 pKa = 11.84VSDD781 pKa = 3.45WKK783 pKa = 10.76GIKK786 pKa = 9.83HH787 pKa = 6.26FSSKK791 pKa = 10.83APATIRR797 pKa = 11.84VTDD800 pKa = 5.29PITVFSRR807 pKa = 11.84KK808 pKa = 8.61PAPVLEE814 pKa = 3.82NLVRR818 pKa = 11.84HH819 pKa = 5.73SRR821 pKa = 11.84ADD823 pKa = 3.47CTVSLDD829 pKa = 4.31EE830 pKa = 5.43IDD832 pKa = 3.75FF833 pKa = 4.33

Molecular weight: 94.2 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

1

0

1

833

833

833

833.0

94.2

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.282 ± 0.0

1.921 ± 0.0

5.162 ± 0.0

4.922 ± 0.0

4.682 ± 0.0

6.483 ± 0.0

3.481 ± 0.0

5.162 ± 0.0

6.483 ± 0.0

10.084 ± 0.0

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.681 ± 0.0

2.761 ± 0.0

6.122 ± 0.0

4.322 ± 0.0

6.122 ± 0.0

8.884 ± 0.0

5.042 ± 0.0

6.363 ± 0.0

1.441 ± 0.0

3.601 ± 0.0
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski