Suttonella ornithocola

Taxonomy: cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Cardiobacteriales; Cardiobacteriaceae; Suttonella

Average proteome isoelectric point is 6.69

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2483 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A380MQZ8|A0A380MQZ8_9GAMM 3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Suttonella ornithocola OX=279832 GN=fabG_1 PE=3 SV=1
MM1 pKa = 7.08NHH3 pKa = 5.75STLQQLIEE11 pKa = 4.37ALEE14 pKa = 4.17EE15 pKa = 4.86DD16 pKa = 4.72DD17 pKa = 5.55FQFNPPATEE26 pKa = 4.35AEE28 pKa = 4.14LSAFEE33 pKa = 4.29AQHH36 pKa = 5.96QIEE39 pKa = 4.82LSPLFKK45 pKa = 10.73ALYY48 pKa = 9.54LKK50 pKa = 11.09ANGSVSTQTVDD61 pKa = 2.88MDD63 pKa = 3.97ALSDD67 pKa = 3.67FMEE70 pKa = 4.97PSEE73 pKa = 4.79HH74 pKa = 6.45GLSKK78 pKa = 11.01EE79 pKa = 3.99DD80 pKa = 3.8LQNMSLTDD88 pKa = 3.1RR89 pKa = 11.84WLSLTEE95 pKa = 4.14IEE97 pKa = 4.51TAIQTICQKK106 pKa = 11.1AEE108 pKa = 4.04DD109 pKa = 4.29YY110 pKa = 10.96FGNDD114 pKa = 2.77WQDD117 pKa = 3.26IILEE121 pKa = 3.91QDD123 pKa = 3.73DD124 pKa = 3.6NHH126 pKa = 7.95GEE128 pKa = 4.03YY129 pKa = 10.3KK130 pKa = 10.39PYY132 pKa = 10.17PFHH135 pKa = 6.57TRR137 pKa = 11.84WLPISKK143 pKa = 10.34NSLEE147 pKa = 4.47QYY149 pKa = 10.24FCLDD153 pKa = 4.21FDD155 pKa = 4.05PQEE158 pKa = 4.69DD159 pKa = 4.56GEE161 pKa = 4.39IGQVLLINIGDD172 pKa = 3.8EE173 pKa = 4.78SIDD176 pKa = 3.79EE177 pKa = 4.19DD178 pKa = 3.79WEE180 pKa = 4.55VYY182 pKa = 10.52RR183 pKa = 11.84MANSFEE189 pKa = 4.13NWVEE193 pKa = 4.31SYY195 pKa = 10.0WLGEE199 pKa = 4.17EE200 pKa = 4.32EE201 pKa = 5.24SDD203 pKa = 3.97IATLFDD209 pKa = 5.02EE210 pKa = 5.51IGQEE214 pKa = 4.06MGVLTSDD221 pKa = 4.35GEE223 pKa = 4.52FNQEE227 pKa = 3.6GYY229 pKa = 10.28FRR231 pKa = 11.84SAVHH235 pKa = 5.44EE236 pKa = 4.03HH237 pKa = 6.44LMNQFGDD244 pKa = 3.92EE245 pKa = 3.98NFMVIDD251 pKa = 3.64EE252 pKa = 4.53TEE254 pKa = 4.17YY255 pKa = 10.78PGDD258 pKa = 3.93ALYY261 pKa = 10.58DD262 pKa = 3.72IYY264 pKa = 10.84WFAPEE269 pKa = 3.91EE270 pKa = 3.88QRR272 pKa = 11.84PYY274 pKa = 10.6HH275 pKa = 6.65ALATNGLSTIEE286 pKa = 4.23MPSAEE291 pKa = 5.56DD292 pKa = 3.88GDD294 pKa = 4.12TKK296 pKa = 10.92NTFEE300 pKa = 5.47HH301 pKa = 6.79IEE303 pKa = 4.02LLAFFPPEE311 pKa = 3.72YY312 pKa = 10.09FLNGDD317 pKa = 4.0QIQMTEE323 pKa = 3.88QQSWILAVFKK333 pKa = 10.25TLAEE337 pKa = 4.04LLKK340 pKa = 9.96EE341 pKa = 4.18GQRR344 pKa = 11.84IDD346 pKa = 3.3INSTFEE352 pKa = 3.99LSGVEE357 pKa = 3.78ALPFKK362 pKa = 10.27EE363 pKa = 3.44ISLRR367 pKa = 11.84YY368 pKa = 8.25STLFTAQEE376 pKa = 4.21TLISTAHH383 pKa = 6.37GEE385 pKa = 4.4SIRR388 pKa = 11.84QLVIVPLYY396 pKa = 10.52SAEE399 pKa = 3.78QQYY402 pKa = 10.48QYY404 pKa = 10.96EE405 pKa = 4.26YY406 pKa = 11.13GYY408 pKa = 11.35AALNQTLKK416 pKa = 10.61AANVGDD422 pKa = 4.31IINPQRR428 pKa = 11.84ANAVSQQQ435 pKa = 3.05

Molecular weight: 49.86 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A380RAS1|A0A380RAS1_9GAMM GTP-binding protein TypA/BipA homolog OS=Suttonella ornithocola OX=279832 GN=typA_2 PE=4 SV=1
MM1 pKa = 7.69SKK3 pKa = 9.01RR4 pKa = 11.84TFQPSNLKK12 pKa = 10.2RR13 pKa = 11.84KK14 pKa = 7.57RR15 pKa = 11.84THH17 pKa = 5.9GFRR20 pKa = 11.84ARR22 pKa = 11.84MATKK26 pKa = 10.4NGRR29 pKa = 11.84QVLARR34 pKa = 11.84RR35 pKa = 11.84RR36 pKa = 11.84AKK38 pKa = 10.03GRR40 pKa = 11.84HH41 pKa = 5.34RR42 pKa = 11.84LTVV45 pKa = 3.07

Molecular weight: 5.36 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2483

0

2483

711237

30

4094

286.4

31.98

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

9.147 ± 0.061

0.951 ± 0.017

5.098 ± 0.052

6.083 ± 0.055

4.005 ± 0.045

6.564 ± 0.057

2.38 ± 0.024

7.379 ± 0.051

5.62 ± 0.046

10.446 ± 0.071

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.357 ± 0.029

4.469 ± 0.046

4.081 ± 0.034

4.798 ± 0.044

4.76 ± 0.047

5.931 ± 0.048

5.461 ± 0.057

5.8 ± 0.056

1.315 ± 0.027

3.355 ± 0.036
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski