Aliicoccus persicus

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Aliicoccus

Average proteome isoelectric point is 5.77

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 1983 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A662Z3Y1|A0A662Z3Y1_9STAP Uncharacterized protein OS=Aliicoccus persicus OX=930138 GN=SAMN05192557_0616 PE=4 SV=1
MM1 pKa = 7.59KK2 pKa = 10.67KK3 pKa = 9.42MIKK6 pKa = 10.25LFTVSMLIGTTVAYY20 pKa = 10.4FGTTTHH26 pKa = 6.5AQDD29 pKa = 3.34EE30 pKa = 4.66ADD32 pKa = 3.51TVEE35 pKa = 3.91ISMTIGNDD43 pKa = 2.89IDD45 pKa = 4.16SLDD48 pKa = 3.95PFLAQATLTDD58 pKa = 3.69SVIYY62 pKa = 10.6NIFEE66 pKa = 4.28GLLDD70 pKa = 4.18AEE72 pKa = 4.82TDD74 pKa = 3.73GSLVPHH80 pKa = 7.26LAHH83 pKa = 7.48DD84 pKa = 4.16YY85 pKa = 10.33EE86 pKa = 5.59ISDD89 pKa = 4.58DD90 pKa = 3.68ALTYY94 pKa = 10.59TFFLEE99 pKa = 4.39EE100 pKa = 4.32GVTFHH105 pKa = 7.57DD106 pKa = 4.92GSDD109 pKa = 3.69FTAEE113 pKa = 4.07DD114 pKa = 3.31VVYY117 pKa = 9.27TYY119 pKa = 11.52SKK121 pKa = 10.82LAGLDD126 pKa = 3.77GEE128 pKa = 5.4DD129 pKa = 3.59ALSDD133 pKa = 2.95KK134 pKa = 10.77WEE136 pKa = 4.08VVEE139 pKa = 5.35SVEE142 pKa = 4.29ATDD145 pKa = 4.79DD146 pKa = 3.73YY147 pKa = 11.05TVEE150 pKa = 4.31VTLSNPDD157 pKa = 3.11SGFLARR163 pKa = 11.84TIRR166 pKa = 11.84AIVPADD172 pKa = 3.81YY173 pKa = 10.54DD174 pKa = 3.68DD175 pKa = 5.13HH176 pKa = 6.33ATNPVGTGPYY186 pKa = 9.34TFVEE190 pKa = 4.15HH191 pKa = 7.36SIDD194 pKa = 4.11QRR196 pKa = 11.84VTLEE200 pKa = 3.98KK201 pKa = 10.46FDD203 pKa = 6.78DD204 pKa = 4.0YY205 pKa = 11.61FQGNDD210 pKa = 3.03FDD212 pKa = 4.79VDD214 pKa = 3.94VVNFDD219 pKa = 3.62VMPDD223 pKa = 3.32EE224 pKa = 4.46EE225 pKa = 4.44TALLAFQAGEE235 pKa = 4.0VDD237 pKa = 5.33FITAVSDD244 pKa = 3.6QNLSRR249 pKa = 11.84VPEE252 pKa = 4.34DD253 pKa = 3.47ANVVSGPLNMVMMLAMNHH271 pKa = 5.2EE272 pKa = 4.53VEE274 pKa = 4.63PLDD277 pKa = 3.85SVEE280 pKa = 4.34VRR282 pKa = 11.84QAMNMVVDD290 pKa = 3.97KK291 pKa = 11.59QEE293 pKa = 4.48VIDD296 pKa = 4.4VAIDD300 pKa = 3.67GNGDD304 pKa = 3.67ALHH307 pKa = 6.44TFMSPAMDD315 pKa = 4.35FYY317 pKa = 11.49FNEE320 pKa = 4.23EE321 pKa = 3.85LVDD324 pKa = 3.98YY325 pKa = 7.96YY326 pKa = 11.14TVDD329 pKa = 3.15VEE331 pKa = 4.62TAQSLMAEE339 pKa = 4.43AGYY342 pKa = 11.03EE343 pKa = 3.99DD344 pKa = 4.46GFSIEE349 pKa = 4.16MKK351 pKa = 10.45VPNNAQLYY359 pKa = 9.01IDD361 pKa = 4.61AAQVLQAQLALINIDD376 pKa = 3.41LTLDD380 pKa = 3.62VIEE383 pKa = 4.61FSTWLEE389 pKa = 3.64DD390 pKa = 3.6VYY392 pKa = 11.4NEE394 pKa = 4.61RR395 pKa = 11.84EE396 pKa = 4.07FEE398 pKa = 4.1STIIGFTGKK407 pKa = 10.24LDD409 pKa = 4.22PYY411 pKa = 11.1DD412 pKa = 3.82VMIRR416 pKa = 11.84MEE418 pKa = 3.94TGYY421 pKa = 10.89AYY423 pKa = 11.29NFMNVDD429 pKa = 2.94IEE431 pKa = 4.81GYY433 pKa = 10.5NEE435 pKa = 3.86ALEE438 pKa = 4.39AAISAPSPEE447 pKa = 4.34EE448 pKa = 3.64SATLYY453 pKa = 10.91KK454 pKa = 10.18EE455 pKa = 4.14AQEE458 pKa = 4.59LLTEE462 pKa = 3.92NAAAVFLMDD471 pKa = 4.32PARR474 pKa = 11.84NSVMRR479 pKa = 11.84SGISGFEE486 pKa = 3.62MYY488 pKa = 9.97PYY490 pKa = 10.43EE491 pKa = 4.92RR492 pKa = 11.84YY493 pKa = 9.26VVKK496 pKa = 10.81DD497 pKa = 3.41LVVEE501 pKa = 4.45

Molecular weight: 55.75 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A662Z256|A0A662Z256_9STAP Transcriptional regulator LacI family OS=Aliicoccus persicus OX=930138 GN=SAMN05192557_0664 PE=4 SV=1
MM1 pKa = 7.49VKK3 pKa = 9.1RR4 pKa = 11.84TYY6 pKa = 10.35QPNKK10 pKa = 8.16RR11 pKa = 11.84KK12 pKa = 9.54HH13 pKa = 5.99SKK15 pKa = 8.87VHH17 pKa = 5.77GFRR20 pKa = 11.84KK21 pKa = 10.02RR22 pKa = 11.84MSTKK26 pKa = 10.16NGRR29 pKa = 11.84HH30 pKa = 3.62VLARR34 pKa = 11.84RR35 pKa = 11.84RR36 pKa = 11.84RR37 pKa = 11.84RR38 pKa = 11.84GRR40 pKa = 11.84KK41 pKa = 8.94VLSAA45 pKa = 4.11

Molecular weight: 5.47 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

1983

0

1983

597384

30

2252

301.3

34.02

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.311 ± 0.066

0.493 ± 0.015

6.541 ± 0.069

8.158 ± 0.074

4.602 ± 0.047

6.271 ± 0.048

2.218 ± 0.029

8.152 ± 0.057

6.022 ± 0.06

9.216 ± 0.056

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.9 ± 0.026

5.012 ± 0.042

3.182 ± 0.026

3.207 ± 0.029

4.126 ± 0.041

6.021 ± 0.037

5.639 ± 0.043

7.351 ± 0.044

0.732 ± 0.017

3.847 ± 0.032
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski