Sulfolobus ellipsoid virus 1

Taxonomy: Viruses; Ovaliviridae; Alphaovalivirus

Average proteome isoelectric point is 6.6

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 38 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A2H4RBQ3|A0A2H4RBQ3_9VIRU Uncharacterized protein OS=Sulfolobus ellipsoid virus 1 OX=2056194 PE=4 SV=1
MM1 pKa = 7.47SFLSSLLKK9 pKa = 10.37ILLSPVIPIVPKK21 pKa = 10.22TPISTTTPVSTQTVTQLVTQTVTQVLTQYY50 pKa = 10.74EE51 pKa = 4.63YY52 pKa = 10.9VYY54 pKa = 10.76LSASCPVCPISTTVPQGYY72 pKa = 7.39TLVYY76 pKa = 9.6YY77 pKa = 8.44YY78 pKa = 10.4QISNPYY84 pKa = 9.62SQDD87 pKa = 3.34LNDD90 pKa = 3.3IQVPIEE96 pKa = 3.91LVVNNPLSYY105 pKa = 10.36IFCEE109 pKa = 4.09DD110 pKa = 3.39QACNKK115 pKa = 9.74PLFSWYY121 pKa = 9.56EE122 pKa = 3.51PSGIFWVLIPFIPANGDD139 pKa = 3.16IVIYY143 pKa = 10.07LYY145 pKa = 11.17EE146 pKa = 5.46NGDD149 pKa = 3.09VNYY152 pKa = 9.35PYY154 pKa = 10.12TGTFGSPLYY163 pKa = 10.85DD164 pKa = 3.18NGRR167 pKa = 11.84GVFYY171 pKa = 10.05EE172 pKa = 4.07YY173 pKa = 10.88FSFYY177 pKa = 10.18DD178 pKa = 3.72TLPHH182 pKa = 6.48EE183 pKa = 4.58WSTCYY188 pKa = 10.51NAVSPNYY195 pKa = 9.37NSTYY199 pKa = 9.8ATLPVNPPDD208 pKa = 3.82GGIGSDD214 pKa = 3.47YY215 pKa = 10.3AYY217 pKa = 9.84PVIGYY222 pKa = 8.71WIDD225 pKa = 3.69FYY227 pKa = 11.86VALPSTSSSDD237 pKa = 2.97ISSSVMALGVGSCNTTNTYY256 pKa = 10.57FIGGGGGDD264 pKa = 3.3TCGNNANGFAFCYY277 pKa = 10.72DD278 pKa = 3.21NFGTTNQWGVYY289 pKa = 9.87VGTTQVAPSPLNYY302 pKa = 9.36TPNNFALYY310 pKa = 10.15SIGVLSSSIIFQMNYY325 pKa = 9.34NNQFIYY331 pKa = 10.5SGSPPISMGNLVILDD346 pKa = 4.08SIGTIGLGFVRR357 pKa = 11.84MRR359 pKa = 11.84KK360 pKa = 8.11ATPDD364 pKa = 3.53GNNLPVLTFTPSGALASS381 pKa = 3.91

Molecular weight: 41.54 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A2H4RBQ4|A0A2H4RBQ4_9VIRU Zn_C2H2-containing protein OS=Sulfolobus ellipsoid virus 1 OX=2056194 PE=4 SV=1
MM1 pKa = 7.68PKK3 pKa = 10.17ANRR6 pKa = 11.84YY7 pKa = 9.53AGLLTISLKK16 pKa = 10.7KK17 pKa = 10.68LLIEE21 pKa = 4.5LPIFDD26 pKa = 5.26RR27 pKa = 11.84LTLIKK32 pKa = 9.97IRR34 pKa = 11.84LISRR38 pKa = 11.84VIKK41 pKa = 9.92FHH43 pKa = 6.92SKK45 pKa = 10.73NNLCEE50 pKa = 4.4RR51 pKa = 11.84II52 pKa = 3.75

Molecular weight: 6.11 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

38

0

38

6917

52

814

182.0

20.66

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

4.467 ± 0.245

1.084 ± 0.155

4.409 ± 0.421

4.901 ± 0.699

4.641 ± 0.328

5.523 ± 0.405

1.128 ± 0.198

9.122 ± 0.314

6.636 ± 1.047

9.441 ± 0.502

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.183 ± 0.26

7.417 ± 0.694

4.568 ± 0.452

3.354 ± 0.421

2.732 ± 0.467

7.619 ± 0.745

6.376 ± 0.589

6.954 ± 0.395

0.853 ± 0.093

6.592 ± 0.305
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski