Moraxella atlantae

Taxonomy: cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Moraxella

Average proteome isoelectric point is 6.5

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 1904 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1B8Q9F9|A0A1B8Q9F9_9GAMM Putative manganese efflux pump MntP OS=Moraxella atlantae OX=34059 GN=mntP PE=3 SV=1
MM1 pKa = 7.25MNDD4 pKa = 3.11TMTLTDD10 pKa = 3.26NAANKK15 pKa = 9.12VRR17 pKa = 11.84RR18 pKa = 11.84LRR20 pKa = 11.84AQEE23 pKa = 4.03GNEE26 pKa = 3.74DD27 pKa = 3.5LMLRR31 pKa = 11.84VYY33 pKa = 9.16VTGGGCSGFSYY44 pKa = 10.51GFNFEE49 pKa = 4.19EE50 pKa = 5.03QLADD54 pKa = 5.2DD55 pKa = 5.16DD56 pKa = 4.7AQFANGDD63 pKa = 3.5VALVVDD69 pKa = 4.29SLSYY73 pKa = 10.65QYY75 pKa = 11.78LHH77 pKa = 7.14GSTIDD82 pKa = 3.68YY83 pKa = 10.87IEE85 pKa = 4.37GLEE88 pKa = 4.09GSRR91 pKa = 11.84FVVDD95 pKa = 3.95NPNATTTCGCGSSFSII111 pKa = 5.02

Molecular weight: 12.04 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1B8QDT3|A0A1B8QDT3_9GAMM Rep_3 domain-containing protein OS=Moraxella atlantae OX=34059 GN=A9306_08355 PE=4 SV=1
MM1 pKa = 7.62LGLFCRR7 pKa = 11.84GKK9 pKa = 9.68WFTVKK14 pKa = 10.53NPAQHH19 pKa = 6.59KK20 pKa = 8.61VFIMPKK26 pKa = 9.06HH27 pKa = 5.69QATQTDD33 pKa = 4.94RR34 pKa = 11.84ITTSDD39 pKa = 3.47TPQVTRR45 pKa = 11.84RR46 pKa = 11.84CLRR49 pKa = 11.84RR50 pKa = 11.84ARR52 pKa = 11.84RR53 pKa = 11.84VLSSAEE59 pKa = 3.8RR60 pKa = 11.84RR61 pKa = 11.84HH62 pKa = 5.96AAGQAVRR69 pKa = 11.84RR70 pKa = 11.84LSRR73 pKa = 11.84LPLPRR78 pKa = 11.84QPNRR82 pKa = 11.84PLNIGVYY89 pKa = 10.27ADD91 pKa = 4.29AFGEE95 pKa = 4.42LPTQGLIDD103 pKa = 3.35WARR106 pKa = 11.84RR107 pKa = 11.84RR108 pKa = 11.84GWRR111 pKa = 11.84VFLPVVIHH119 pKa = 6.35AHH121 pKa = 5.42SALCFRR127 pKa = 11.84QLHH130 pKa = 5.39ATTLKK135 pKa = 9.16NARR138 pKa = 11.84LARR141 pKa = 11.84HH142 pKa = 6.14PLAMRR147 pKa = 11.84QPAYY151 pKa = 10.28GALVTARR158 pKa = 11.84DD159 pKa = 3.81LDD161 pKa = 4.0VLFVPLVAFDD171 pKa = 4.26DD172 pKa = 4.17DD173 pKa = 4.76GYY175 pKa = 11.06RR176 pKa = 11.84LGMGGGFYY184 pKa = 10.82DD185 pKa = 3.01RR186 pKa = 11.84TLAHH190 pKa = 6.92RR191 pKa = 11.84RR192 pKa = 11.84NKK194 pKa = 10.05PLVIGWAYY202 pKa = 9.64DD203 pKa = 3.53WQRR206 pKa = 11.84VAHH209 pKa = 7.03LPRR212 pKa = 11.84QPWDD216 pKa = 3.19ARR218 pKa = 11.84LDD220 pKa = 3.96LAVLPSGIMDD230 pKa = 3.65FRR232 pKa = 11.84QRR234 pKa = 11.84FVVSPPKK241 pKa = 10.26PVTAAPNDD249 pKa = 3.76FLLKK253 pKa = 10.71LLTCSTPTVANDD265 pKa = 3.33AAVFDD270 pKa = 5.33DD271 pKa = 5.71DD272 pKa = 4.62VAPVDD277 pKa = 4.2DD278 pKa = 4.74TLSSAQIVTVMNPNHH293 pKa = 6.98LAQLLAQADD302 pKa = 3.49AFLAVNRR309 pKa = 11.84DD310 pKa = 3.19TDD312 pKa = 3.57SDD314 pKa = 3.93FF315 pKa = 4.7

Molecular weight: 35.42 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

1904

0

1904

631180

38

12592

331.5

36.54

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

10.696 ± 0.084

0.876 ± 0.023

6.08 ± 0.053

4.521 ± 0.055

3.576 ± 0.045

6.584 ± 0.058

2.422 ± 0.039

5.706 ± 0.039

4.385 ± 0.05

10.428 ± 0.075

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.407 ± 0.033

4.317 ± 0.067

4.416 ± 0.037

5.601 ± 0.056

5.031 ± 0.052

5.5 ± 0.056

6.172 ± 0.073

7.045 ± 0.054

1.216 ± 0.024

3.018 ± 0.041
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski