Temnothorax curvispinosus

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Protostomia; Ecdysozoa; Panarthropoda; Arthropoda; Mandibulata; Pancrustacea; Hexapoda; Insecta; Dicondylia; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae;

Average proteome isoelectric point is 6.84

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 21925 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A6J1Q4E3|A0A6J1Q4E3_9HYME Sodium channel protein OS=Temnothorax curvispinosus OX=300111 GN=LOC112457128 PE=3 SV=1
MM1 pKa = 7.1LTKK4 pKa = 10.62DD5 pKa = 3.69SNNEE9 pKa = 3.82EE10 pKa = 4.28KK11 pKa = 10.12TVDD14 pKa = 4.16ALNTCYY20 pKa = 10.69DD21 pKa = 3.91KK22 pKa = 11.42EE23 pKa = 4.68SVMLTNGCNNEE34 pKa = 4.05EE35 pKa = 4.23TTIDD39 pKa = 4.52ALNTCYY45 pKa = 10.78GINTKK50 pKa = 10.55SYY52 pKa = 10.09IDD54 pKa = 4.0KK55 pKa = 10.94NNEE58 pKa = 3.78NNSEE62 pKa = 4.22SVMLTKK68 pKa = 10.65DD69 pKa = 3.49SNNEE73 pKa = 3.53EE74 pKa = 4.21TTIDD78 pKa = 4.27ALNTCYY84 pKa = 10.7DD85 pKa = 3.91KK86 pKa = 11.42EE87 pKa = 4.64SVMLTNDD94 pKa = 3.42SNNEE98 pKa = 3.77EE99 pKa = 4.28TTDD102 pKa = 4.15DD103 pKa = 4.49VLNTCYY109 pKa = 10.5GYY111 pKa = 10.54DD112 pKa = 3.31ISTLDD117 pKa = 3.62VIFMDD122 pKa = 5.11KK123 pKa = 10.41YY124 pKa = 10.18RR125 pKa = 11.84KK126 pKa = 7.92TMNIMNKK133 pKa = 10.07DD134 pKa = 3.19CDD136 pKa = 3.68IEE138 pKa = 4.46GKK140 pKa = 10.17SDD142 pKa = 3.79ATDD145 pKa = 3.2TCNTVEE151 pKa = 4.44NDD153 pKa = 4.17DD154 pKa = 4.6IAGKK158 pKa = 10.03DD159 pKa = 3.2

Molecular weight: 17.86 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A6J1PSB2|A0A6J1PSB2_9HYME carbonic anhydrase 9-like OS=Temnothorax curvispinosus OX=300111 GN=LOC112454783 PE=3 SV=1
MM1 pKa = 7.47SPLNRR6 pKa = 11.84GPLMGPRR13 pKa = 11.84LPPAGARR20 pKa = 11.84QLPPPRR26 pKa = 11.84FVGRR30 pKa = 11.84ITPHH34 pKa = 5.68GMPPRR39 pKa = 11.84MPPLPPLNPMFGPRR53 pKa = 11.84QRR55 pKa = 11.84LPLPPRR61 pKa = 11.84PAGGVSRR68 pKa = 11.84PNGMLPRR75 pKa = 11.84FPAGPRR81 pKa = 11.84SRR83 pKa = 11.84GMAPIVPSMGPRR95 pKa = 11.84GSGPPRR101 pKa = 11.84GPPMRR106 pKa = 11.84PWPRR110 pKa = 11.84RR111 pKa = 11.84MPLPPPPLPLQMVPPMRR128 pKa = 11.84PRR130 pKa = 11.84YY131 pKa = 9.28NAGNGNAKK139 pKa = 10.24AKK141 pKa = 10.23TMGNAKK147 pKa = 9.58KK148 pKa = 10.83VKK150 pKa = 10.43VEE152 pKa = 3.87

Molecular weight: 16.39 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

15254

6671

21925

14401447

34

16248

656.9

73.9

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.451 ± 0.015

1.865 ± 0.018

5.614 ± 0.014

6.907 ± 0.028

3.359 ± 0.013

5.431 ± 0.019

2.516 ± 0.008

5.545 ± 0.013

6.262 ± 0.027

8.949 ± 0.024

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.252 ± 0.008

4.884 ± 0.014

5.154 ± 0.021

4.43 ± 0.022

5.893 ± 0.016

8.225 ± 0.022

6.134 ± 0.013

6.066 ± 0.013

1.088 ± 0.005

2.974 ± 0.011
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski