Alces alces faeces associated smacovirus MP78

Taxonomy: Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cremevirales; Smacoviridae; Porprismacovirus; Porprismacovirus alecas1

Average proteome isoelectric point is 5.87

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A2Z5CL51|A0A2Z5CL51_9VIRU Capsid protein OS=Alces alces faeces associated smacovirus MP78 OX=2219142 PE=4 SV=1
MM1 pKa = 6.48TTNKK5 pKa = 10.07AFASYY10 pKa = 10.94HH11 pKa = 5.92EE12 pKa = 5.38IIDD15 pKa = 3.8LHH17 pKa = 5.65TEE19 pKa = 3.76SDD21 pKa = 3.57KK22 pKa = 11.68VGVIGIHH29 pKa = 5.99TPTDD33 pKa = 3.73YY34 pKa = 10.68TPHH37 pKa = 7.21RR38 pKa = 11.84MFGGYY43 pKa = 9.63FKK45 pKa = 10.6QFKK48 pKa = 9.05KK49 pKa = 10.66FKK51 pKa = 10.49YY52 pKa = 8.83LGCSISLVPAARR64 pKa = 11.84LPADD68 pKa = 4.3PSQVSYY74 pKa = 11.05GAGEE78 pKa = 4.1PPIDD82 pKa = 4.96PRR84 pKa = 11.84DD85 pKa = 3.68LLNPIMFHH93 pKa = 6.19GCHH96 pKa = 6.32GNDD99 pKa = 4.09LGNVLNRR106 pKa = 11.84LYY108 pKa = 10.18TLNSDD113 pKa = 3.73GVSGGFATNIQEE125 pKa = 4.19SDD127 pKa = 3.5SVLKK131 pKa = 10.82FEE133 pKa = 5.77EE134 pKa = 4.35ITNSYY139 pKa = 10.6YY140 pKa = 10.76DD141 pKa = 4.52DD142 pKa = 3.99NLLEE146 pKa = 4.02NLYY149 pKa = 10.94YY150 pKa = 10.57KK151 pKa = 10.91ALTDD155 pKa = 3.59NTWRR159 pKa = 11.84KK160 pKa = 8.79AHH162 pKa = 5.84PQRR165 pKa = 11.84GFRR168 pKa = 11.84KK169 pKa = 9.87GGLRR173 pKa = 11.84PLIYY177 pKa = 11.04SMATNVQIMNPNEE190 pKa = 3.84FSTEE194 pKa = 3.62RR195 pKa = 11.84LAGSNGHH202 pKa = 6.97LSITSPINTGMPEE215 pKa = 3.79DD216 pKa = 3.89FAFSVSGSSGRR227 pKa = 11.84FSRR230 pKa = 11.84GVIDD234 pKa = 5.36DD235 pKa = 3.93GVKK238 pKa = 10.42VFTPHH243 pKa = 5.83LTGLGWLDD251 pKa = 3.42TRR253 pKa = 11.84SVITQGVEE261 pKa = 4.19SDD263 pKa = 3.06WTTLSDD269 pKa = 3.29TDD271 pKa = 5.19AIASAQDD278 pKa = 3.49SIVNKK283 pKa = 10.09EE284 pKa = 4.23VVTTLPKK291 pKa = 10.24IFMGVILLPPAYY303 pKa = 8.68KK304 pKa = 9.84TEE306 pKa = 3.6QYY308 pKa = 10.98YY309 pKa = 11.1RR310 pKa = 11.84MIINHH315 pKa = 6.47RR316 pKa = 11.84FGFKK320 pKa = 10.29DD321 pKa = 3.4FRR323 pKa = 11.84GISFANDD330 pKa = 3.18QLVTPAYY337 pKa = 10.77ANFNDD342 pKa = 4.47SDD344 pKa = 4.28YY345 pKa = 11.02EE346 pKa = 4.24YY347 pKa = 11.02NPPEE351 pKa = 4.91DD352 pKa = 4.52PDD354 pKa = 4.0SGEE357 pKa = 4.04GDD359 pKa = 3.78SPSLSGSEE367 pKa = 3.98YY368 pKa = 10.73LVSDD372 pKa = 3.92LQQYY376 pKa = 6.57FTSYY380 pKa = 11.03VGMGTWKK387 pKa = 10.68LDD389 pKa = 3.27TQYY392 pKa = 10.86PQTVYY397 pKa = 9.2EE398 pKa = 4.4TLTEE402 pKa = 4.07YY403 pKa = 11.15DD404 pKa = 3.51SGEE407 pKa = 4.21STLSVSFPVQNQSDD421 pKa = 4.28GNSTGWGYY429 pKa = 10.96NGNWSCSAFWYY440 pKa = 10.12LDD442 pKa = 3.04NGFVYY447 pKa = 10.31LGIMLCEE454 pKa = 3.61EE455 pKa = 4.25SLYY458 pKa = 11.13GFYY461 pKa = 10.61LWQNSEE467 pKa = 3.64WTFQNWSDD475 pKa = 3.79SLDD478 pKa = 4.34LIGSGSITQLQADD491 pKa = 3.96VAFAGLVNSNSSTVDD506 pKa = 3.66DD507 pKa = 4.5LNQYY511 pKa = 8.12QIKK514 pKa = 10.1SLSGNIGDD522 pKa = 4.31VDD524 pKa = 3.71NAA526 pKa = 4.01

Molecular weight: 58.4 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A2Z5CL51|A0A2Z5CL51_9VIRU Capsid protein OS=Alces alces faeces associated smacovirus MP78 OX=2219142 PE=4 SV=1
MM1 pKa = 7.38QRR3 pKa = 11.84TNKK6 pKa = 9.31NRR8 pKa = 11.84SRR10 pKa = 11.84QVQDD14 pKa = 3.05QSAGIISTFSCDD26 pKa = 3.19NIYY29 pKa = 10.48VHH31 pKa = 7.0NAFCKK36 pKa = 8.57TYY38 pKa = 10.21AYY40 pKa = 8.5HH41 pKa = 6.7TFLSLLYY48 pKa = 9.38EE49 pKa = 4.21YY50 pKa = 10.51RR51 pKa = 11.84SNALSTLVSRR61 pKa = 11.84MLTKK65 pKa = 9.85ICYY68 pKa = 9.55LRR70 pKa = 11.84YY71 pKa = 9.24QRR73 pKa = 11.84CGRR76 pKa = 11.84QEE78 pKa = 3.54AHH80 pKa = 6.15MVKK83 pKa = 8.42TWMLTVPRR91 pKa = 11.84NGDD94 pKa = 2.72WCTTQSVCRR103 pKa = 11.84MIQEE107 pKa = 4.07NDD109 pKa = 3.17VKK111 pKa = 10.72KK112 pKa = 7.72WTIGFEE118 pKa = 4.07EE119 pKa = 4.82GKK121 pKa = 10.19NGYY124 pKa = 8.04RR125 pKa = 11.84HH126 pKa = 4.49YY127 pKa = 10.66QIRR130 pKa = 11.84LVSSNHH136 pKa = 7.1DD137 pKa = 3.3FFEE140 pKa = 4.05WCKK143 pKa = 10.72INLPTAHH150 pKa = 6.89IEE152 pKa = 4.08EE153 pKa = 4.45ATEE156 pKa = 3.66EE157 pKa = 4.14SGNYY161 pKa = 7.47EE162 pKa = 3.78RR163 pKa = 11.84KK164 pKa = 10.02SGNFLSSDD172 pKa = 3.29DD173 pKa = 3.73TAEE176 pKa = 3.67IRR178 pKa = 11.84QVRR181 pKa = 11.84FGVLRR186 pKa = 11.84EE187 pKa = 4.09SQKK190 pKa = 11.1KK191 pKa = 9.5ILEE194 pKa = 4.23EE195 pKa = 4.18VNDD198 pKa = 3.63QGDD201 pKa = 3.76RR202 pKa = 11.84EE203 pKa = 4.06IDD205 pKa = 3.63VYY207 pKa = 11.2FDD209 pKa = 3.37PRR211 pKa = 11.84GNNGKK216 pKa = 7.55TWLTIHH222 pKa = 6.92LYY224 pKa = 9.71EE225 pKa = 5.01RR226 pKa = 11.84GRR228 pKa = 11.84ALVVPRR234 pKa = 11.84ANTTAEE240 pKa = 4.09KK241 pKa = 10.3LSAYY245 pKa = 9.35ICSSYY250 pKa = 11.14NGEE253 pKa = 4.12EE254 pKa = 4.01YY255 pKa = 10.95VIIDD259 pKa = 3.56IPRR262 pKa = 11.84SRR264 pKa = 11.84KK265 pKa = 7.6ITPEE269 pKa = 3.18IYY271 pKa = 10.16EE272 pKa = 4.69AIEE275 pKa = 4.26EE276 pKa = 4.33IKK278 pKa = 10.88DD279 pKa = 3.42GLVFDD284 pKa = 4.33SRR286 pKa = 11.84YY287 pKa = 9.92SGRR290 pKa = 11.84SRR292 pKa = 11.84NIRR295 pKa = 11.84GVKK298 pKa = 10.34LIIFTNKK305 pKa = 10.14RR306 pKa = 11.84LDD308 pKa = 3.57LTKK311 pKa = 10.74LSNDD315 pKa = 2.76RR316 pKa = 11.84WRR318 pKa = 11.84LHH320 pKa = 7.11AISTTTKK327 pKa = 10.25RR328 pKa = 11.84PMKK331 pKa = 9.47TDD333 pKa = 3.55YY334 pKa = 11.14VPSDD338 pKa = 4.8DD339 pKa = 4.67DD340 pKa = 3.87TAPDD344 pKa = 3.52GAKK347 pKa = 10.49AVDD350 pKa = 3.31

Molecular weight: 40.7 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

876

350

526

438.0

49.55

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

4.68 ± 0.103

1.37 ± 0.535

6.963 ± 0.396

5.365 ± 0.871

4.338 ± 0.698

7.42 ± 1.329

2.055 ± 0.135

5.936 ± 0.704

4.338 ± 0.97

7.648 ± 0.629

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.826 ± 0.065

6.164 ± 0.263

3.881 ± 0.765

3.767 ± 0.198

5.251 ± 2.105

9.132 ± 0.995

7.192 ± 0.138

5.479 ± 0.03

1.826 ± 0.065

5.365 ± 0.13
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski