Golden silk orbweaver associated circular virus 1

Taxonomy: Viruses; unclassified viruses; unclassified DNA viruses; unclassified ssDNA viruses; Circularisvirus

Average proteome isoelectric point is 7.88

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A346BPA5|A0A346BPA5_9VIRU Putative capsid protein OS=Golden silk orbweaver associated circular virus 1 OX=2293292 PE=4 SV=1
MM1 pKa = 7.37SKK3 pKa = 10.36CKK5 pKa = 9.84RR6 pKa = 11.84WLFTSYY12 pKa = 11.15NVVSEE17 pKa = 4.04PFYY20 pKa = 10.89DD21 pKa = 4.05EE22 pKa = 5.54KK23 pKa = 10.75IHH25 pKa = 7.24EE26 pKa = 4.32YY27 pKa = 10.83LCFGRR32 pKa = 11.84EE33 pKa = 4.14TCPSTNRR40 pKa = 11.84RR41 pKa = 11.84HH42 pKa = 5.06LQGYY46 pKa = 7.61VAFKK50 pKa = 11.08NRR52 pKa = 11.84ITLAGIKK59 pKa = 9.56KK60 pKa = 8.59WIPGAHH66 pKa = 6.24FEE68 pKa = 4.31RR69 pKa = 11.84ARR71 pKa = 11.84GTPTEE76 pKa = 3.88NRR78 pKa = 11.84DD79 pKa = 3.38YY80 pKa = 10.97CKK82 pKa = 10.5KK83 pKa = 10.85DD84 pKa = 2.99GDD86 pKa = 3.91FKK88 pKa = 11.21EE89 pKa = 4.4WGSVPTVTGRR99 pKa = 11.84ACKK102 pKa = 10.35FGDD105 pKa = 3.43ILHH108 pKa = 6.64LAEE111 pKa = 5.39SGNITCIKK119 pKa = 9.24DD120 pKa = 3.54TYY122 pKa = 9.26PGVYY126 pKa = 9.82LRR128 pKa = 11.84YY129 pKa = 9.59KK130 pKa = 9.8ATLLSSLVCNTTDD143 pKa = 3.74LKK145 pKa = 11.13NSCGVWLCGPPRR157 pKa = 11.84SGKK160 pKa = 10.32DD161 pKa = 3.25YY162 pKa = 11.21AVRR165 pKa = 11.84QLDD168 pKa = 3.77NVYY171 pKa = 10.37MKK173 pKa = 10.06MLNKK177 pKa = 9.22WWDD180 pKa = 3.65GYY182 pKa = 11.21KK183 pKa = 10.49NEE185 pKa = 4.52DD186 pKa = 3.48NVLISDD192 pKa = 4.54IEE194 pKa = 4.17PDD196 pKa = 3.02HH197 pKa = 6.58GKK199 pKa = 9.66WIGYY203 pKa = 7.26YY204 pKa = 9.84IKK206 pKa = 9.91IWCDD210 pKa = 2.98MYY212 pKa = 11.66AFNAEE217 pKa = 4.01IKK219 pKa = 9.89GGSMKK224 pKa = 9.93IRR226 pKa = 11.84PKK228 pKa = 10.47KK229 pKa = 10.31IFMTSNYY236 pKa = 10.04KK237 pKa = 10.19LDD239 pKa = 3.62EE240 pKa = 4.36VFSGEE245 pKa = 3.97ILSAVAARR253 pKa = 11.84CNVYY257 pKa = 10.39DD258 pKa = 3.97YY259 pKa = 11.93SNGCDD264 pKa = 3.38VIVTKK269 pKa = 10.69RR270 pKa = 11.84MSPSPSDD277 pKa = 3.63VFISALKK284 pKa = 9.1EE285 pKa = 4.15HH286 pKa = 7.2EE287 pKa = 5.53DD288 pKa = 3.57GLSFTKK294 pKa = 10.3EE295 pKa = 3.82VLQTSSCLQEE305 pKa = 3.92EE306 pKa = 4.93AISSISEE313 pKa = 4.05EE314 pKa = 4.15SSNTCIEE321 pKa = 4.19EE322 pKa = 3.99

Molecular weight: 36.68 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A346BPA5|A0A346BPA5_9VIRU Putative capsid protein OS=Golden silk orbweaver associated circular virus 1 OX=2293292 PE=4 SV=1
MM1 pKa = 7.54VYY3 pKa = 10.09RR4 pKa = 11.84SRR6 pKa = 11.84RR7 pKa = 11.84RR8 pKa = 11.84FYY10 pKa = 10.94KK11 pKa = 10.21RR12 pKa = 11.84RR13 pKa = 11.84LVYY16 pKa = 10.2KK17 pKa = 9.34KK18 pKa = 9.1RR19 pKa = 11.84QYY21 pKa = 10.78RR22 pKa = 11.84RR23 pKa = 11.84FRR25 pKa = 11.84RR26 pKa = 11.84SRR28 pKa = 11.84RR29 pKa = 11.84IRR31 pKa = 11.84VLKK34 pKa = 10.39NKK36 pKa = 10.16RR37 pKa = 11.84SGNIYY42 pKa = 10.25KK43 pKa = 9.02LTVKK47 pKa = 10.48KK48 pKa = 10.82SFNTTLRR55 pKa = 11.84FYY57 pKa = 11.4VDD59 pKa = 3.25NASQSSVNITKK70 pKa = 9.94FEE72 pKa = 4.26RR73 pKa = 11.84DD74 pKa = 2.82IQMADD79 pKa = 3.28FFTNNHH85 pKa = 6.22EE86 pKa = 3.82IWDD89 pKa = 4.85RR90 pKa = 11.84IHH92 pKa = 7.54DD93 pKa = 3.57YY94 pKa = 11.01HH95 pKa = 7.73YY96 pKa = 10.99IKK98 pKa = 10.69FNYY101 pKa = 9.63FIIKK105 pKa = 9.83FPEE108 pKa = 3.69ITYY111 pKa = 8.23VTYY114 pKa = 10.89SGVTPTGIAKK124 pKa = 9.9QAVTGISSFNTEE136 pKa = 4.07RR137 pKa = 11.84YY138 pKa = 7.61PFHH141 pKa = 6.42VAWDD145 pKa = 3.78VEE147 pKa = 4.21QALDD151 pKa = 4.89FNAQDD156 pKa = 3.29ASFDD160 pKa = 3.65AKK162 pKa = 10.53EE163 pKa = 3.74LSEE166 pKa = 4.31YY167 pKa = 10.41PFAKK171 pKa = 9.74KK172 pKa = 10.26VYY174 pKa = 8.54PSQKK178 pKa = 8.43RR179 pKa = 11.84APYY182 pKa = 9.87FMWRR186 pKa = 11.84VPSCWRR192 pKa = 11.84QYY194 pKa = 10.89IDD196 pKa = 3.5TNAVQPLMFNNIPFYY211 pKa = 11.4NFFQNVTGIKK221 pKa = 9.85NVRR224 pKa = 11.84SPTKK228 pKa = 10.15ILGGHH233 pKa = 5.5EE234 pKa = 3.99NWWGNNLPSTVRR246 pKa = 11.84PDD248 pKa = 3.43IKK250 pKa = 10.68PSDD253 pKa = 3.78SDD255 pKa = 3.97TVFMQSFLKK264 pKa = 10.85CEE266 pKa = 5.09LIASVTFRR274 pKa = 11.84GVKK277 pKa = 8.06YY278 pKa = 9.33TGRR281 pKa = 11.84NSS283 pKa = 2.97

Molecular weight: 33.78 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

605

283

322

302.5

35.23

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

4.628 ± 0.022

2.645 ± 1.224

5.289 ± 0.439

5.124 ± 1.228

5.785 ± 1.48

5.289 ± 1.109

1.818 ± 0.032

6.446 ± 0.054

7.934 ± 0.324

5.289 ± 0.886

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.983 ± 0.137

5.95 ± 0.706

4.132 ± 0.292

2.479 ± 0.889

6.777 ± 1.523

8.099 ± 0.429

5.95 ± 0.259

6.281 ± 0.497

2.314 ± 0.123

5.785 ± 0.363
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski