Odonata-associated circular virus-7

Taxonomy: Viruses; unclassified viruses; unclassified DNA viruses; unclassified ssDNA viruses

Average proteome isoelectric point is 6.44

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0B4UH28|A0A0B4UH28_9VIRU Putative capsid protein OS=Odonata-associated circular virus-7 OX=1592127 PE=4 SV=1
MM1 pKa = 7.45FNLDD5 pKa = 3.55GAKK8 pKa = 10.17SCDD11 pKa = 3.69FQDD14 pKa = 4.09PCWCEE19 pKa = 3.74YY20 pKa = 10.4IRR22 pKa = 11.84TEE24 pKa = 3.93GMGYY28 pKa = 10.21IMDD31 pKa = 4.53IDD33 pKa = 4.07GADD36 pKa = 3.07ITEE39 pKa = 4.22FQPDD43 pKa = 3.65EE44 pKa = 4.99FIDD47 pKa = 4.29LGDD50 pKa = 3.88SRR52 pKa = 11.84DD53 pKa = 3.85DD54 pKa = 3.46EE55 pKa = 4.92TIVISSDD62 pKa = 3.7SEE64 pKa = 4.07DD65 pKa = 3.54DD66 pKa = 3.87KK67 pKa = 12.01EE68 pKa = 4.99DD69 pKa = 3.84IEE71 pKa = 4.21WLEE74 pKa = 4.43EE75 pKa = 3.51IRR77 pKa = 11.84KK78 pKa = 7.97RR79 pKa = 11.84TRR81 pKa = 11.84LMKK84 pKa = 10.48RR85 pKa = 11.84EE86 pKa = 3.88IVKK89 pKa = 10.07AACEE93 pKa = 3.82QLAEE97 pKa = 4.01EE98 pKa = 5.49LINKK102 pKa = 7.94NN103 pKa = 3.06

Molecular weight: 12.01 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0B4UHZ3|A0A0B4UHZ3_9VIRU Replication-associated protein OS=Odonata-associated circular virus-7 OX=1592127 PE=3 SV=1
MM1 pKa = 7.32AAVAGRR7 pKa = 11.84FALRR11 pKa = 11.84SFARR15 pKa = 11.84YY16 pKa = 8.51FPQAMRR22 pKa = 11.84YY23 pKa = 6.4MARR26 pKa = 11.84NPGQGGRR33 pKa = 11.84LLRR36 pKa = 11.84SSAKK40 pKa = 9.17YY41 pKa = 10.15ARR43 pKa = 11.84AAAPVAGLAANAVRR57 pKa = 11.84YY58 pKa = 9.45VSKK61 pKa = 10.68KK62 pKa = 9.34SKK64 pKa = 10.38QYY66 pKa = 11.27LYY68 pKa = 11.19LKK70 pKa = 9.86NLKK73 pKa = 10.04KK74 pKa = 10.7KK75 pKa = 9.95IVSSRR80 pKa = 11.84GKK82 pKa = 10.14KK83 pKa = 8.69NQPSVFKK90 pKa = 10.43KK91 pKa = 10.44RR92 pKa = 11.84RR93 pKa = 11.84ITTQGVSGKK102 pKa = 10.02RR103 pKa = 11.84LEE105 pKa = 4.23LSRR108 pKa = 11.84KK109 pKa = 9.15YY110 pKa = 10.73VDD112 pKa = 3.64PFSFYY117 pKa = 10.24NRR119 pKa = 11.84KK120 pKa = 9.29RR121 pKa = 11.84VVKK124 pKa = 10.07IMKK127 pKa = 9.93VYY129 pKa = 9.04GTEE132 pKa = 3.99QTDD135 pKa = 3.58TCCYY139 pKa = 10.05VEE141 pKa = 4.34AAVTEE146 pKa = 4.11PRR148 pKa = 11.84AWILNMWKK156 pKa = 10.49ALVRR160 pKa = 11.84KK161 pKa = 9.76LSQKK165 pKa = 10.82AGLQIYY171 pKa = 9.23SCNEE175 pKa = 4.14AISMKK180 pKa = 9.32TLGVGGVDD188 pKa = 4.16LEE190 pKa = 4.52MVLYY194 pKa = 8.21TQNQANVSAPSITVSFADD212 pKa = 3.87GTTVTSLAEE221 pKa = 4.63AIAQPFYY228 pKa = 10.79SYY230 pKa = 11.6SSGSTNAGVGSVLSLVEE247 pKa = 4.07PNYY250 pKa = 10.83LVLQRR255 pKa = 11.84KK256 pKa = 9.26SSVVNFTYY264 pKa = 10.55QIVNLQLDD272 pKa = 3.85NVLVEE277 pKa = 5.54GKK279 pKa = 9.59LCCIMKK285 pKa = 9.85LQNQNQSNTGGTDD298 pKa = 3.31SEE300 pKa = 4.77DD301 pKa = 3.74VSNHH305 pKa = 5.59PLVGKK310 pKa = 10.17LYY312 pKa = 10.23YY313 pKa = 10.79FNGLPGTKK321 pKa = 9.76VPNQDD326 pKa = 3.51PGSLEE331 pKa = 3.86NNIFRR336 pKa = 11.84RR337 pKa = 11.84FPADD341 pKa = 3.21RR342 pKa = 11.84HH343 pKa = 5.83LKK345 pKa = 9.43ILKK348 pKa = 9.54DD349 pKa = 3.54ANLEE353 pKa = 4.02QEE355 pKa = 4.2LRR357 pKa = 11.84EE358 pKa = 4.47PISPISFWNCIGCTNFKK375 pKa = 9.97LQPGEE380 pKa = 3.69IRR382 pKa = 11.84TFTFWDD388 pKa = 3.64QVKK391 pKa = 9.92SQPFLKK397 pKa = 10.34YY398 pKa = 9.84LKK400 pKa = 10.22KK401 pKa = 10.52FRR403 pKa = 11.84LEE405 pKa = 4.1YY406 pKa = 9.33GTNAPAQLQDD416 pKa = 3.55QYY418 pKa = 12.0NLNYY422 pKa = 10.22CPLKK426 pKa = 10.12FAMVGLEE433 pKa = 3.91EE434 pKa = 4.54QIQSSSSNNLTIGYY448 pKa = 9.0EE449 pKa = 3.93IEE451 pKa = 4.19SRR453 pKa = 11.84CASMFKK459 pKa = 10.15EE460 pKa = 4.11LRR462 pKa = 11.84PNFCRR467 pKa = 11.84TEE469 pKa = 4.14TEE471 pKa = 4.32TKK473 pKa = 9.46QFPVIVV479 pKa = 3.74

Molecular weight: 53.85 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3

0

3

878

103

479

292.7

33.52

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.036 ± 0.936

2.506 ± 0.407

4.897 ± 2.67

7.062 ± 2.046

5.353 ± 0.818

5.695 ± 0.297

1.822 ± 1.345

5.695 ± 1.475

6.72 ± 0.588

7.745 ± 1.072

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.05 ± 0.508

5.353 ± 0.905

4.556 ± 0.701

4.784 ± 0.816

6.264 ± 0.384

6.72 ± 1.057

5.467 ± 0.527

5.923 ± 1.351

1.253 ± 0.318

4.1 ± 0.656
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski