Penicillium arizonense

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Ascomycota; saccharomyceta; Pezizomycotina; leotiomyceta; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Penicillium

Average proteome isoelectric point is 6.31

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 12121 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1F5LKF4|A0A1F5LKF4_9EURO MFS domain-containing protein OS=Penicillium arizonense OX=1835702 GN=PENARI_c007G11189 PE=4 SV=1
MM1 pKa = 7.06TFNVFMTGLLAATAVALPQPHH22 pKa = 5.68WTRR25 pKa = 11.84DD26 pKa = 3.29TEE28 pKa = 4.92SNVEE32 pKa = 3.88ARR34 pKa = 11.84SSGGGVQIVNNMDD47 pKa = 3.46TNVYY51 pKa = 9.66LWSTDD56 pKa = 3.24SGPGSMQTISSGGGDD71 pKa = 4.11YY72 pKa = 10.91SEE74 pKa = 4.51KK75 pKa = 10.52WNTNSNGGGISIKK88 pKa = 10.19MSTTEE93 pKa = 4.06SEE95 pKa = 4.4SSVLQFEE102 pKa = 4.59YY103 pKa = 10.13TQDD106 pKa = 2.86GSTIYY111 pKa = 10.46WDD113 pKa = 3.58MSSIDD118 pKa = 4.66LDD120 pKa = 3.84STSDD124 pKa = 3.67FVKK127 pKa = 10.64SGFTVQPSDD136 pKa = 3.66SSCTSVSCAAGDD148 pKa = 4.13ANCKK152 pKa = 8.72EE153 pKa = 4.92AYY155 pKa = 9.02QKK157 pKa = 10.99PDD159 pKa = 3.39DD160 pKa = 4.46VNTNSCSLDD169 pKa = 3.23AGFTLTLGG177 pKa = 3.67

Molecular weight: 18.73 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1F5L377|A0A1F5L377_9EURO Uncharacterized protein OS=Penicillium arizonense OX=1835702 GN=PENARI_c044G00615 PE=4 SV=1
MM1 pKa = 7.62ARR3 pKa = 11.84RR4 pKa = 11.84PIRR7 pKa = 11.84IQLRR11 pKa = 11.84RR12 pKa = 11.84AGRR15 pKa = 11.84NRR17 pKa = 11.84RR18 pKa = 11.84VPARR22 pKa = 11.84ILTT25 pKa = 3.81

Molecular weight: 3.03 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

12121

0

12121

5759560

8

6183

475.2

52.58

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.523 ± 0.019

1.233 ± 0.007

5.647 ± 0.016

6.06 ± 0.023

3.835 ± 0.014

6.864 ± 0.02

2.413 ± 0.01

5.097 ± 0.013

4.602 ± 0.02

9.02 ± 0.025

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.251 ± 0.009

3.772 ± 0.012

5.957 ± 0.023

4.048 ± 0.014

5.868 ± 0.019

8.338 ± 0.023

5.993 ± 0.015

6.153 ± 0.015

1.501 ± 0.008

2.825 ± 0.011
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski