Foxtail mosaic virus

Taxonomy: Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes; Tymovirales; Alphaflexiviridae; Potexvirus

Average proteome isoelectric point is 7.36

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 5 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>sp|P22170|TGB2_FXMV Movement protein TGB2 OS=Foxtail mosaic virus OX=12179 GN=ORF3 PE=3 SV=2
MM1 pKa = 7.94DD2 pKa = 3.99SEE4 pKa = 4.23IVEE7 pKa = 4.47RR8 pKa = 11.84LTKK11 pKa = 10.6LGFVKK16 pKa = 10.17TSHH19 pKa = 4.75THH21 pKa = 5.21IAGEE25 pKa = 4.05PLVIHH30 pKa = 6.67AVAGAGKK37 pKa = 6.67TTLLRR42 pKa = 11.84SLLEE46 pKa = 4.02LPGVEE51 pKa = 4.05VFTGGEE57 pKa = 4.01HH58 pKa = 7.71DD59 pKa = 4.47PPNLSGKK66 pKa = 8.9YY67 pKa = 8.66IRR69 pKa = 11.84CAAPPVAGAYY79 pKa = 9.96NILDD83 pKa = 4.33EE84 pKa = 4.54YY85 pKa = 10.05PAYY88 pKa = 9.71PNWRR92 pKa = 11.84SQPWNVLIADD102 pKa = 3.73NLQYY106 pKa = 10.88KK107 pKa = 9.96EE108 pKa = 3.95PTARR112 pKa = 11.84AHH114 pKa = 4.45YY115 pKa = 7.92TCNRR119 pKa = 11.84THH121 pKa = 7.7RR122 pKa = 11.84LGQLTVDD129 pKa = 3.71ALRR132 pKa = 11.84RR133 pKa = 11.84VGFDD137 pKa = 2.64ITFAGTQTEE146 pKa = 4.62DD147 pKa = 3.23YY148 pKa = 10.45GFQEE152 pKa = 3.9GHH154 pKa = 7.4LYY156 pKa = 10.07TSQFYY161 pKa = 10.45GQVISLDD168 pKa = 3.86TQAHH172 pKa = 6.59KK173 pKa = 10.48IAVRR177 pKa = 11.84HH178 pKa = 5.26GLAPLSALEE187 pKa = 4.08TRR189 pKa = 11.84GLEE192 pKa = 4.01FDD194 pKa = 3.68EE195 pKa = 4.65TTVITTKK202 pKa = 10.58TSLEE206 pKa = 4.17EE207 pKa = 3.85VKK209 pKa = 10.31DD210 pKa = 3.43RR211 pKa = 11.84HH212 pKa = 4.97MVYY215 pKa = 10.4VALTRR220 pKa = 11.84HH221 pKa = 5.99RR222 pKa = 11.84RR223 pKa = 11.84TCHH226 pKa = 6.85LYY228 pKa = 8.32TAHH231 pKa = 7.14FAPSAA236 pKa = 3.52

Molecular weight: 26.31 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>sp|P22171|TGB3_FXMV Movement protein TGBp3 OS=Foxtail mosaic virus OX=12179 GN=ORF4 PE=3 SV=2
MM1 pKa = 7.26SLSHH5 pKa = 6.11GTGAPAISTPLTLRR19 pKa = 11.84PPPDD23 pKa = 3.26NTKK26 pKa = 10.8AILTIAIGIAASLVFFMLTRR46 pKa = 11.84NNLPHH51 pKa = 7.55VGDD54 pKa = 4.91NIHH57 pKa = 6.41SLPHH61 pKa = 5.78GGSYY65 pKa = 10.05IDD67 pKa = 3.58GTKK70 pKa = 10.3SINYY74 pKa = 8.21RR75 pKa = 11.84PPASRR80 pKa = 11.84YY81 pKa = 8.64PSSNLLAFAPPILAAVLFFLTQPYY105 pKa = 10.08LATRR109 pKa = 11.84RR110 pKa = 11.84SRR112 pKa = 11.84CVRR115 pKa = 11.84CFVVHH120 pKa = 6.42GACTNHH126 pKa = 5.36TT127 pKa = 3.9

Molecular weight: 13.64 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

5

0

5

1965

52

1335

393.0

44.37

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.601 ± 1.281

1.425 ± 0.337

5.038 ± 0.632

6.056 ± 1.187

4.173 ± 0.389

4.682 ± 0.657

3.155 ± 0.923

4.885 ± 0.365

5.7 ± 1.082

9.618 ± 0.715

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.985 ± 0.415

4.224 ± 0.639

7.125 ± 0.615

4.071 ± 0.467

5.598 ± 0.214

5.191 ± 0.545

7.837 ± 0.623

5.598 ± 0.442

1.221 ± 0.257

3.817 ± 0.312
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski