Avian metaavulavirus 2

Taxonomy: Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Paramyxoviridae; Avulavirinae; Metaavulavirus

Average proteome isoelectric point is 6.29

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 6 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|Q916F8|Q916F8_9MONO Hemagglutinin-neuraminidase OS=Avian metaavulavirus 2 OX=2560313 GN=HN PE=3 SV=1
MM1 pKa = 6.87NQALVILLVSFQLGVALDD19 pKa = 3.93NSVLAPIGVASAQEE33 pKa = 4.0WQLAAYY39 pKa = 6.49TTTLTGTIAVRR50 pKa = 11.84FIPVLPGNLSTCAQEE65 pKa = 4.48TLQEE69 pKa = 4.11YY70 pKa = 10.47NRR72 pKa = 11.84TVTNILGPLRR82 pKa = 11.84EE83 pKa = 4.36NLDD86 pKa = 3.68ALLSDD91 pKa = 4.23FDD93 pKa = 4.25KK94 pKa = 10.78PASRR98 pKa = 11.84FVGAIIGSVALGVATAAQITAAVALNQAQEE128 pKa = 3.82NARR131 pKa = 11.84NIWRR135 pKa = 11.84LKK137 pKa = 10.27EE138 pKa = 4.31SIKK141 pKa = 9.74KK142 pKa = 8.26TNEE145 pKa = 3.36AVLEE149 pKa = 4.42LKK151 pKa = 10.82DD152 pKa = 4.01GLATTAIALDD162 pKa = 3.89KK163 pKa = 10.27VQKK166 pKa = 10.5FINDD170 pKa = 4.08DD171 pKa = 4.22IIPQIKK177 pKa = 10.48DD178 pKa = 2.7IDD180 pKa = 4.17CQVVANKK187 pKa = 10.52LGVYY191 pKa = 10.44LSLYY195 pKa = 8.74LTEE198 pKa = 4.3LTTVFGSQITNPALSTLSYY217 pKa = 9.72QALYY221 pKa = 9.92SLCGGDD227 pKa = 3.27MGKK230 pKa = 8.33LTEE233 pKa = 5.08LIGVNAKK240 pKa = 10.31DD241 pKa = 3.4VGSLYY246 pKa = 10.33EE247 pKa = 4.26ANLITGQIVGYY258 pKa = 10.32DD259 pKa = 3.66PEE261 pKa = 4.29LQIILIQVSYY271 pKa = 10.28PSVSEE276 pKa = 4.1VTGVRR281 pKa = 11.84ATEE284 pKa = 4.01LVTVSVTTPKK294 pKa = 11.1GEE296 pKa = 4.01GQAIVPRR303 pKa = 11.84YY304 pKa = 7.88VAQSRR309 pKa = 11.84VLTEE313 pKa = 3.93EE314 pKa = 4.94LDD316 pKa = 3.61VSTCRR321 pKa = 11.84FSKK324 pKa = 7.66TTLYY328 pKa = 10.42CRR330 pKa = 11.84SILTRR335 pKa = 11.84PLPTLIASCLSGKK348 pKa = 10.3YY349 pKa = 9.82DD350 pKa = 3.52DD351 pKa = 4.82CQYY354 pKa = 8.24TTEE357 pKa = 4.23IGALSSRR364 pKa = 11.84FITVNGGVLANCRR377 pKa = 11.84AIVCKK382 pKa = 10.23CVSPPHH388 pKa = 7.16IIPQNDD394 pKa = 3.17IGSVTVIDD402 pKa = 3.88SSICKK407 pKa = 9.49EE408 pKa = 4.06VVLEE412 pKa = 4.16SVQLRR417 pKa = 11.84LEE419 pKa = 4.66GKK421 pKa = 10.18LSSQYY426 pKa = 10.48FSNVTIDD433 pKa = 3.86LSQITTSGSLDD444 pKa = 3.1ISSEE448 pKa = 3.63IGSINNTVNRR458 pKa = 11.84VDD460 pKa = 3.94EE461 pKa = 4.94LIKK464 pKa = 10.72EE465 pKa = 4.33SNEE468 pKa = 3.23WLNAVNPRR476 pKa = 11.84LVNNTSIIVLCVLAALIIVWLIALTVCFCYY506 pKa = 10.1SARR509 pKa = 11.84YY510 pKa = 8.12SAKK513 pKa = 9.39SKK515 pKa = 9.3QMRR518 pKa = 11.84GAMTGIDD525 pKa = 3.9NPYY528 pKa = 9.76VIQSATKK535 pKa = 8.27MM536 pKa = 3.57

Molecular weight: 57.75 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|F5BH21|F5BH21_9MONO Nucleocapsid OS=Avian metaavulavirus 2 OX=2560313 GN=NP PE=3 SV=1
MM1 pKa = 7.29AQTTVRR7 pKa = 11.84LYY9 pKa = 10.34IDD11 pKa = 3.69EE12 pKa = 4.89ASPDD16 pKa = 3.84IEE18 pKa = 4.26LLSYY22 pKa = 9.69PLIMKK27 pKa = 7.92DD28 pKa = 3.01TGHH31 pKa = 5.99GTKK34 pKa = 10.07EE35 pKa = 3.77LQQQIRR41 pKa = 11.84VAEE44 pKa = 4.21IGALQGGKK52 pKa = 9.74NEE54 pKa = 4.47SVFINAYY61 pKa = 10.42GFVQQCKK68 pKa = 8.58VKK70 pKa = 10.53PGATQFFQVDD80 pKa = 3.38AATKK84 pKa = 9.76PEE86 pKa = 4.3VVTAGMIIIGAVKK99 pKa = 9.95GVAGITKK106 pKa = 9.77LAEE109 pKa = 4.0EE110 pKa = 4.45VFEE113 pKa = 5.03LDD115 pKa = 3.82ISIKK119 pKa = 10.38KK120 pKa = 9.64SASFHH125 pKa = 5.93EE126 pKa = 4.62KK127 pKa = 10.09VAVSFNTVPLSLMNSTACRR146 pKa = 11.84NLGYY150 pKa = 8.83VTNAEE155 pKa = 4.15EE156 pKa = 5.34AIKK159 pKa = 10.62CPSKK163 pKa = 10.24IQAGVTYY170 pKa = 9.58KK171 pKa = 10.41FKK173 pKa = 11.01IMFVSLTRR181 pKa = 11.84LHH183 pKa = 6.25NGKK186 pKa = 10.26LYY188 pKa = 10.2RR189 pKa = 11.84VPKK192 pKa = 10.19AVYY195 pKa = 9.61AVEE198 pKa = 4.78ASALYY203 pKa = 9.93KK204 pKa = 10.58VQLEE208 pKa = 4.43VGFKK212 pKa = 10.63LDD214 pKa = 3.26VAKK217 pKa = 10.71DD218 pKa = 3.66HH219 pKa = 6.72PHH221 pKa = 6.0VKK223 pKa = 9.16MLKK226 pKa = 8.55KK227 pKa = 10.33VEE229 pKa = 4.37RR230 pKa = 11.84NGEE233 pKa = 4.16TLYY236 pKa = 11.14LGYY239 pKa = 11.09AWFHH243 pKa = 6.03LCNFKK248 pKa = 9.24KK249 pKa = 9.31TNAKK253 pKa = 10.21GEE255 pKa = 4.16SRR257 pKa = 11.84TISNLEE263 pKa = 3.82GKK265 pKa = 9.05VRR267 pKa = 11.84AMGIKK272 pKa = 10.16VSLYY276 pKa = 10.44DD277 pKa = 3.23LWGPTLVVQITGKK290 pKa = 7.51TSKK293 pKa = 10.03YY294 pKa = 9.15AQGFFSTTGTCCLPVSKK311 pKa = 10.42AAPEE315 pKa = 3.93LAKK318 pKa = 11.1LMWSCNATIVEE329 pKa = 4.28AAVIIQGSDD338 pKa = 2.52RR339 pKa = 11.84RR340 pKa = 11.84AVVTSEE346 pKa = 3.67DD347 pKa = 3.89LEE349 pKa = 4.82VYY351 pKa = 10.41GAVAKK356 pKa = 9.89EE357 pKa = 3.67KK358 pKa = 9.91QAAKK362 pKa = 10.18GFHH365 pKa = 7.1PFRR368 pKa = 11.84KK369 pKa = 9.78

Molecular weight: 40.42 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

6

0

6

4583

369

2242

763.8

84.54

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.008 ± 0.937

1.898 ± 0.271

5.062 ± 0.419

5.062 ± 0.374

3.491 ± 0.461

5.651 ± 0.646

1.898 ± 0.412

7.004 ± 0.679

4.931 ± 0.792

10.168 ± 0.827

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.335 ± 0.378

4.32 ± 0.408

4.08 ± 0.385

4.757 ± 0.277

5.04 ± 0.511

8.662 ± 0.463

6.655 ± 0.479

6.917 ± 0.626

1.069 ± 0.131

2.989 ± 0.268
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski