Chrysochloris asiatica (Cape golden mole)

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Eutheria; Afrotheria; Chrysochloridae; Chrysochlorinae; Chrysochloris

Average proteome isoelectric point is 6.71

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 24928 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A6I9JIQ6|A0A6I9JIQ6_CHRAS keratin-associated protein 24-1-like OS=Chrysochloris asiatica OX=185453 GN=LOC102822057 PE=4 SV=1
MM1 pKa = 7.97DD2 pKa = 3.9VLFVAILAVPLILGQKK18 pKa = 10.41LEE20 pKa = 4.42DD21 pKa = 3.8EE22 pKa = 4.8EE23 pKa = 4.62EE24 pKa = 4.45LEE26 pKa = 4.19EE27 pKa = 5.58DD28 pKa = 4.54DD29 pKa = 4.69YY30 pKa = 11.95YY31 pKa = 11.39QVIYY35 pKa = 10.03EE36 pKa = 4.25YY37 pKa = 10.41TVTPHH42 pKa = 6.65YY43 pKa = 11.15DD44 pKa = 3.3DD45 pKa = 4.87FVVNFTIDD53 pKa = 3.25YY54 pKa = 11.28SMFEE58 pKa = 4.06SEE60 pKa = 5.45DD61 pKa = 3.63RR62 pKa = 11.84LVSLDD67 pKa = 3.88KK68 pKa = 10.96EE69 pKa = 4.34VTEE72 pKa = 4.61AAEE75 pKa = 4.2TTTNLEE81 pKa = 4.29TDD83 pKa = 3.73STTHH87 pKa = 6.07PVEE90 pKa = 3.86LQKK93 pKa = 10.79PVTMKK98 pKa = 10.51PMTMEE103 pKa = 5.08PSPDD107 pKa = 3.42TNDD110 pKa = 3.18AVSNLQSPVFLILSWALIQGGMYY133 pKa = 10.47FMM135 pKa = 6.18

Molecular weight: 15.44 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A6I9KE09|A0A6I9KE09_CHRAS Neugrin OS=Chrysochloris asiatica OX=185453 GN=LOC102829756 PE=3 SV=1
MM1 pKa = 7.57SSHH4 pKa = 5.15KK5 pKa = 8.91TFRR8 pKa = 11.84IKK10 pKa = 10.64RR11 pKa = 11.84FLAKK15 pKa = 9.71KK16 pKa = 9.58QKK18 pKa = 8.69QNRR21 pKa = 11.84PIPQWIRR28 pKa = 11.84MKK30 pKa = 9.89TGNKK34 pKa = 8.66IRR36 pKa = 11.84YY37 pKa = 7.97NSKK40 pKa = 8.63KK41 pKa = 9.37RR42 pKa = 11.84HH43 pKa = 4.01WRR45 pKa = 11.84RR46 pKa = 11.84TKK48 pKa = 10.77LGLL51 pKa = 3.67

Molecular weight: 6.38 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

19590

5338

24928

14419874

31

35420

578.5

64.54

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.762 ± 0.015

2.196 ± 0.013

4.841 ± 0.01

7.006 ± 0.02

3.722 ± 0.012

6.41 ± 0.023

2.589 ± 0.008

4.553 ± 0.016

5.776 ± 0.019

9.989 ± 0.021

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.248 ± 0.008

3.73 ± 0.011

6.117 ± 0.024

4.75 ± 0.015

5.528 ± 0.015

8.341 ± 0.02

5.438 ± 0.012

6.087 ± 0.014

1.172 ± 0.005

2.736 ± 0.008
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski