Wenzhouxiangella marina

Taxonomy: cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Wenzhouxiangellaceae; Wenzhouxiangella

Average proteome isoelectric point is 5.89

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3023 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0K0XUA3|A0A0K0XUA3_9GAMM Uncharacterized protein OS=Wenzhouxiangella marina OX=1579979 GN=WM2015_913 PE=4 SV=1
MM1 pKa = 7.68AAGLLATHH9 pKa = 7.65AIATVEE15 pKa = 4.02YY16 pKa = 9.61DD17 pKa = 3.35QDD19 pKa = 3.78VTPTIIFGAGNNNGAFTTDD38 pKa = 2.7RR39 pKa = 11.84FNGVEE44 pKa = 3.35IGLRR48 pKa = 11.84AKK50 pKa = 10.39LRR52 pKa = 11.84YY53 pKa = 9.55DD54 pKa = 3.64EE55 pKa = 5.61NGVPQNVFNSNGDD68 pKa = 3.22GSYY71 pKa = 9.42TFYY74 pKa = 10.85TRR76 pKa = 11.84SRR78 pKa = 11.84PNFPDD83 pKa = 3.58GQRR86 pKa = 11.84GEE88 pKa = 4.52WSFEE92 pKa = 3.7WAVNTDD98 pKa = 3.9FDD100 pKa = 5.05GSSLLNLDD108 pKa = 4.04DD109 pKa = 5.14LSYY112 pKa = 11.3EE113 pKa = 4.4LGLDD117 pKa = 3.7ADD119 pKa = 4.99PGPGTNFLVFDD130 pKa = 6.08PITPSAEE137 pKa = 3.99APCWDD142 pKa = 3.89HH143 pKa = 7.57AIGNNGTGNGGGTAVNCITDD163 pKa = 4.0PNPGQSYY170 pKa = 11.16AGLLTDD176 pKa = 5.04NNVAQNSWQYY186 pKa = 11.48GFFLIDD192 pKa = 3.38EE193 pKa = 4.72LADD196 pKa = 3.59YY197 pKa = 10.7DD198 pKa = 3.67PRR200 pKa = 11.84LPGRR204 pKa = 11.84YY205 pKa = 7.58TIYY208 pKa = 10.58LQASNGSGVVARR220 pKa = 11.84SEE222 pKa = 4.0IEE224 pKa = 4.36VIVVDD229 pKa = 4.49PPLAFDD235 pKa = 3.92QNVTPEE241 pKa = 4.66AIFGSGNANGEE252 pKa = 4.1FTTDD256 pKa = 2.85RR257 pKa = 11.84RR258 pKa = 11.84NDD260 pKa = 3.05IEE262 pKa = 4.86LGLRR266 pKa = 11.84GKK268 pKa = 10.19LRR270 pKa = 11.84YY271 pKa = 8.88NASGVPEE278 pKa = 3.9NTFNSNGDD286 pKa = 3.36GTYY289 pKa = 10.7SFAPRR294 pKa = 11.84LVPGGSPLRR303 pKa = 11.84AEE305 pKa = 4.68WGFEE309 pKa = 3.43WSVNTNYY316 pKa = 10.23QGGAGPNVDD325 pKa = 3.27AYY327 pKa = 9.76TYY329 pKa = 10.93EE330 pKa = 4.91LGLDD334 pKa = 3.89ADD336 pKa = 4.56PSLGTDD342 pKa = 4.07FLVFDD347 pKa = 6.28PITPTAEE354 pKa = 4.22VPCWDD359 pKa = 3.72HH360 pKa = 8.34AMGNNGTPNGGGTSANCLGDD380 pKa = 3.84PNAGATYY387 pKa = 10.81QNLIANNNVAQNSWRR402 pKa = 11.84YY403 pKa = 9.05EE404 pKa = 3.94FFASGPIAGFDD415 pKa = 3.53PTVDD419 pKa = 3.11GSYY422 pKa = 10.43RR423 pKa = 11.84IYY425 pKa = 10.67LAAYY429 pKa = 8.13NADD432 pKa = 3.33GVEE435 pKa = 4.37VARR438 pKa = 11.84SDD440 pKa = 3.03IDD442 pKa = 3.45ILVGSASGGTVSDD455 pKa = 4.52VEE457 pKa = 4.82LSMSTTATGTQFTGDD472 pKa = 4.01AITYY476 pKa = 9.22QLVASNTDD484 pKa = 3.28LAKK487 pKa = 10.47AANVSILNVLPDD499 pKa = 3.7NLSFVAGSCDD509 pKa = 3.65DD510 pKa = 3.82GSVANVAGQSVDD522 pKa = 3.72FALADD527 pKa = 4.03LPSGASTICTIDD539 pKa = 3.39TVVASSGTIVNSASVAADD557 pKa = 3.26NDD559 pKa = 3.3GDD561 pKa = 4.36ANNNAASVRR570 pKa = 11.84LLGVIEE576 pKa = 4.45SVALTGDD583 pKa = 3.31IPSPTDD589 pKa = 3.16NDD591 pKa = 3.36YY592 pKa = 10.87TRR594 pKa = 11.84INDD597 pKa = 3.47VVQIAGPGDD606 pKa = 3.66QIVLNGVFDD615 pKa = 4.3WNEE618 pKa = 3.98SNAFASWALGSDD630 pKa = 4.55GIDD633 pKa = 3.22GTVDD637 pKa = 2.63DD638 pKa = 4.12WTIYY642 pKa = 10.74VPDD645 pKa = 4.32GLADD649 pKa = 3.68LTITATAPGDD659 pKa = 3.75ATIKK663 pKa = 10.95GPGDD667 pKa = 3.35LAGVDD672 pKa = 3.89LEE674 pKa = 4.89GFLLVYY680 pKa = 8.25GTNPGLEE687 pKa = 3.79ISNLVIEE694 pKa = 5.26DD695 pKa = 3.49FDD697 pKa = 4.06VAIGIYY703 pKa = 10.43YY704 pKa = 10.39NGGGVNVYY712 pKa = 11.16DD713 pKa = 4.19NLTIIDD719 pKa = 4.35NFIAMPRR726 pKa = 11.84DD727 pKa = 3.48VAGNSQGGEE736 pKa = 3.71AFQNIGIHH744 pKa = 6.14YY745 pKa = 10.13SFGDD749 pKa = 3.56NILIARR755 pKa = 11.84NVIEE759 pKa = 4.57IPGDD763 pKa = 3.82SASTASLRR771 pKa = 11.84AAQVAMQSNTSGGAYY786 pKa = 9.07EE787 pKa = 4.3GLVIEE792 pKa = 5.02DD793 pKa = 3.44NEE795 pKa = 4.08IRR797 pKa = 11.84ILLAQAEE804 pKa = 4.53IPAGIIGIWEE814 pKa = 4.2NGNAHH819 pKa = 6.39TSNITVRR826 pKa = 11.84NNRR829 pKa = 11.84FINLDD834 pKa = 3.61PANDD838 pKa = 3.81PSLNDD843 pKa = 3.17QEE845 pKa = 4.69AFRR848 pKa = 11.84ITSHH852 pKa = 6.45SSASSTTRR860 pKa = 11.84YY861 pKa = 8.54EE862 pKa = 3.8GNYY865 pKa = 10.47AEE867 pKa = 4.81GANVGYY873 pKa = 10.36GWLSFDD879 pKa = 3.75TYY881 pKa = 11.43GADD884 pKa = 3.51FSTRR888 pKa = 11.84DD889 pKa = 3.62PIEE892 pKa = 4.25FVSNTAVDD900 pKa = 3.85NLTGILIDD908 pKa = 3.95SNGAADD914 pKa = 4.32LSCNRR919 pKa = 11.84IHH921 pKa = 7.49GNDD924 pKa = 3.87LGLSNITQAGRR935 pKa = 11.84ISLADD940 pKa = 4.22DD941 pKa = 3.37NWWGCNAGPNAGDD954 pKa = 3.67CDD956 pKa = 4.34AYY958 pKa = 10.57DD959 pKa = 3.57TGLTTDD965 pKa = 2.91RR966 pKa = 11.84WLVAGLTADD975 pKa = 3.78AGTVLINSTTGLNLDD990 pKa = 4.25LRR992 pKa = 11.84SNSDD996 pKa = 3.21GNEE999 pKa = 4.04VTSCTLPATPVILAANEE1016 pKa = 4.34GSVTPAVGATSAALLDD1032 pKa = 4.1ADD1034 pKa = 3.85YY1035 pKa = 8.08TAPGFATGDD1044 pKa = 3.79TVTVTVDD1051 pKa = 3.47AEE1053 pKa = 4.31VLTVDD1058 pKa = 4.44FTVEE1062 pKa = 4.18LPVDD1066 pKa = 4.06SIFNDD1071 pKa = 3.35RR1072 pKa = 11.84FEE1074 pKa = 4.09NN1075 pKa = 3.72

Molecular weight: 112.64 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0K0XRS8|A0A0K0XRS8_9GAMM Glycine--tRNA ligase alpha subunit OS=Wenzhouxiangella marina OX=1579979 GN=glyQ PE=3 SV=1
MM1 pKa = 7.45KK2 pKa = 9.56RR3 pKa = 11.84TFQPSRR9 pKa = 11.84IKK11 pKa = 10.39RR12 pKa = 11.84VRR14 pKa = 11.84THH16 pKa = 5.87GFRR19 pKa = 11.84ARR21 pKa = 11.84MATASGRR28 pKa = 11.84AVINARR34 pKa = 11.84RR35 pKa = 11.84AKK37 pKa = 9.74GRR39 pKa = 11.84KK40 pKa = 8.81RR41 pKa = 11.84LAATNNRR48 pKa = 3.77

Molecular weight: 5.52 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3023

0

3023

1100236

29

5034

364.0

39.81

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

11.293 ± 0.061

0.888 ± 0.016

6.264 ± 0.039

6.606 ± 0.047

3.598 ± 0.028

8.554 ± 0.051

2.072 ± 0.026

4.746 ± 0.028

1.887 ± 0.032

11.339 ± 0.071

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.107 ± 0.023

2.638 ± 0.041

5.217 ± 0.032

3.765 ± 0.025

7.827 ± 0.067

5.977 ± 0.047

4.588 ± 0.053

6.926 ± 0.043

1.573 ± 0.021

2.135 ± 0.021
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski