Botryosphaeria dothidea victorivirus 1

Taxonomy: Viruses; Riboviria; Orthornavirae; Duplornaviricota; Chrymotiviricetes; Ghabrivirales; Totiviridae; Victorivirus; unclassified Victorivirus

Average proteome isoelectric point is 6.43

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    

Protein with the lowest isoelectric point:
>tr|A0A089H6F5|A0A089H6F5_9VIRU Coat protein OS=Botryosphaeria dothidea victorivirus 1 OX=1547580 GN=CP PE=4 SV=1
MM1 pKa = 7.23EE2 pKa = 5.08VEE4 pKa = 4.34TQFRR8 pKa = 11.84PSFLAGILLRR18 pKa = 11.84PTGGRR23 pKa = 11.84LAAEE27 pKa = 4.22AGGRR31 pKa = 11.84EE32 pKa = 4.27YY33 pKa = 11.31ASALNSTMTVRR44 pKa = 11.84GITTTRR50 pKa = 11.84SSVVRR55 pKa = 11.84YY56 pKa = 7.26HH57 pKa = 6.7TSPTQGEE64 pKa = 4.41LRR66 pKa = 11.84DD67 pKa = 4.13KK68 pKa = 11.28LDD70 pKa = 4.21LAPEE74 pKa = 4.58GARR77 pKa = 11.84RR78 pKa = 11.84LVAEE82 pKa = 4.21YY83 pKa = 8.23QTSGEE88 pKa = 4.22MVAHH92 pKa = 6.68FSNLARR98 pKa = 11.84KK99 pKa = 8.68YY100 pKa = 10.88VNFSANFEE108 pKa = 4.13ASNLAGLVEE117 pKa = 5.09RR118 pKa = 11.84ISLGLSLAAWHH129 pKa = 7.18DD130 pKa = 3.9NVTAFSLRR138 pKa = 11.84GGRR141 pKa = 11.84EE142 pKa = 3.42PDD144 pKa = 3.08IAALGATTTPVNSVADD160 pKa = 3.66CVFIPRR166 pKa = 11.84VVNTVITGDD175 pKa = 3.26IFSVLVAAATGCGAAVATDD194 pKa = 3.53MLGVNDD200 pKa = 4.69NGVALLNDD208 pKa = 2.96VDD210 pKa = 4.01ARR212 pKa = 11.84RR213 pKa = 11.84FPPAAVEE220 pKa = 3.92ALRR223 pKa = 11.84LLGANMNDD231 pKa = 3.42AGQGALFALALTRR244 pKa = 11.84GLHH247 pKa = 6.16KK248 pKa = 10.41GTVVQSTTRR257 pKa = 11.84GGALTRR263 pKa = 11.84AFLIAGTFSVPFGGINPTPEE283 pKa = 4.35PYY285 pKa = 10.4AALPALNSSDD295 pKa = 3.18GVAVGGYY302 pKa = 10.25VDD304 pKa = 4.68GLCLATAAAVAHH316 pKa = 6.91CDD318 pKa = 3.07PGTTIEE324 pKa = 4.29GLWYY328 pKa = 6.58PTTYY332 pKa = 8.9VTPRR336 pKa = 11.84HH337 pKa = 6.13DD338 pKa = 3.77AFGVAGSVPTADD350 pKa = 4.15PLNGASLWPQIISEE364 pKa = 4.21SGRR367 pKa = 11.84FLGEE371 pKa = 3.78YY372 pKa = 10.13VSALGRR378 pKa = 11.84LFSAEE383 pKa = 4.48DD384 pKa = 3.73GLGLANRR391 pKa = 11.84AACTMAHH398 pKa = 7.12LALVDD403 pKa = 4.66DD404 pKa = 5.18WGCDD408 pKa = 3.55DD409 pKa = 4.49ATVAPYY415 pKa = 9.79FWIEE419 pKa = 3.88PTSILPQNWLGSAAEE434 pKa = 4.11RR435 pKa = 11.84SMSGALVTPGGEE447 pKa = 4.07VTLPAVEE454 pKa = 4.62GVQPVGDD461 pKa = 4.09STGPWAGYY469 pKa = 8.54VLEE472 pKa = 4.74LSSARR477 pKa = 11.84RR478 pKa = 11.84NPLFIHH484 pKa = 6.84FGGQMSEE491 pKa = 4.02HH492 pKa = 7.06LGTIVPRR499 pKa = 11.84QLDD502 pKa = 4.0VEE504 pKa = 4.79TVVHH508 pKa = 6.12PKK510 pKa = 10.16LRR512 pKa = 11.84AEE514 pKa = 3.99QAALRR519 pKa = 11.84DD520 pKa = 3.86RR521 pKa = 11.84LQASLGLDD529 pKa = 3.29QYY531 pKa = 10.81VHH533 pKa = 6.89LPEE536 pKa = 5.11RR537 pKa = 11.84MPIPSPDD544 pKa = 3.14NFMHH548 pKa = 6.05VGCRR552 pKa = 11.84MGVEE556 pKa = 4.5VVHH559 pKa = 5.81EE560 pKa = 3.98QFVNYY565 pKa = 10.07RR566 pKa = 11.84MYY568 pKa = 11.2PSMLPAAHH576 pKa = 6.85EE577 pKa = 4.46FAHH580 pKa = 5.6STVTLSVTKK589 pKa = 10.3PFGVPAGAAPEE600 pKa = 4.19IEE602 pKa = 4.79CGFSHH607 pKa = 7.17EE608 pKa = 4.23PTRR611 pKa = 11.84TALMLSQTSHH621 pKa = 6.21NLRR624 pKa = 11.84GPSSVAFTGMLISTSAPAAPRR645 pKa = 11.84YY646 pKa = 8.27TSGQGRR652 pKa = 11.84SRR654 pKa = 11.84RR655 pKa = 11.84VALGDD660 pKa = 3.32EE661 pKa = 4.15RR662 pKa = 11.84HH663 pKa = 5.74EE664 pKa = 4.35VGSAGVDD671 pKa = 3.56HH672 pKa = 6.86NPSPPVPVGNRR683 pKa = 11.84LGVTTHH689 pKa = 6.78HH690 pKa = 7.13DD691 pKa = 3.63AGRR694 pKa = 11.84GPAPIRR700 pKa = 11.84RR701 pKa = 11.84ADD703 pKa = 3.44QVRR706 pKa = 11.84GGGGGAPQRR715 pKa = 11.84RR716 pKa = 11.84RR717 pKa = 11.84DD718 pKa = 3.78DD719 pKa = 3.88GQAQDD724 pKa = 4.45PVAPPPAHH732 pKa = 6.94GEE734 pKa = 3.9PAPPEE739 pKa = 3.87VDD741 pKa = 3.35EE742 pKa = 4.52PP743 pKa = 4.08

Molecular weight:
78.06 kDa
Isoelectric point according different methods:






Protein with the highest isoelectric point:
>tr|A0A089H6F5|A0A089H6F5_9VIRU Coat protein OS=Botryosphaeria dothidea victorivirus 1 OX=1547580 GN=CP PE=4 SV=1
MM1 pKa = 7.17QDD3 pKa = 2.92AVAVRR8 pKa = 11.84AAEE11 pKa = 3.98VGPLGVEE18 pKa = 4.18LLRR21 pKa = 11.84VIDD24 pKa = 4.83TFAAWTRR31 pKa = 11.84THH33 pKa = 7.2FPRR36 pKa = 11.84EE37 pKa = 3.95LVAGMSRR44 pKa = 11.84LQVQRR49 pKa = 11.84QQLDD53 pKa = 3.7SIHH56 pKa = 7.05PLLAPAIATLLLDD69 pKa = 3.71YY70 pKa = 10.38PLQLEE75 pKa = 4.37LDD77 pKa = 3.85HH78 pKa = 6.5GVVMRR83 pKa = 11.84LVDD86 pKa = 4.16LALPRR91 pKa = 11.84IDD93 pKa = 5.33AEE95 pKa = 4.04PAEE98 pKa = 4.25PAKK101 pKa = 10.83NQALRR106 pKa = 11.84QHH108 pKa = 6.35VKK110 pKa = 10.43RR111 pKa = 11.84NSPRR115 pKa = 11.84HH116 pKa = 4.56NQYY119 pKa = 9.6MEE121 pKa = 3.97LASAIRR127 pKa = 11.84HH128 pKa = 5.7DD129 pKa = 3.79KK130 pKa = 10.4PFRR133 pKa = 11.84LACFPEE139 pKa = 4.76KK140 pKa = 10.43KK141 pKa = 10.18LQAATAKK148 pKa = 10.53KK149 pKa = 9.93NFSTRR154 pKa = 11.84RR155 pKa = 11.84LLDD158 pKa = 3.48SVSRR162 pKa = 11.84EE163 pKa = 3.85LGASFLGWLVAHH175 pKa = 6.79CACKK179 pKa = 9.98VTDD182 pKa = 4.72DD183 pKa = 3.96QFQMIIIFGLTLSTRR198 pKa = 11.84LGRR201 pKa = 11.84HH202 pKa = 5.71AYY204 pKa = 10.05LYY206 pKa = 10.43ALSMVTNPSHH216 pKa = 6.85AKK218 pKa = 9.6SLNVVLKK225 pKa = 10.88GLGANASTPGCWFVEE240 pKa = 4.5GQGLLGRR247 pKa = 11.84GVGDD251 pKa = 3.31VDD253 pKa = 3.82WNSEE257 pKa = 3.42IPYY260 pKa = 10.13RR261 pKa = 11.84CDD263 pKa = 3.31PDD265 pKa = 3.71LVRR268 pKa = 11.84EE269 pKa = 4.05KK270 pKa = 10.05TINVDD275 pKa = 3.22PEE277 pKa = 4.29TIRR280 pKa = 11.84PHH282 pKa = 5.72IRR284 pKa = 11.84AILEE288 pKa = 4.01RR289 pKa = 11.84EE290 pKa = 4.01LVNRR294 pKa = 11.84NDD296 pKa = 3.94LPDD299 pKa = 4.47MEE301 pKa = 5.82DD302 pKa = 2.98FWTSRR307 pKa = 11.84WLWCVNGSQTSDD319 pKa = 2.83SDD321 pKa = 3.61KK322 pKa = 11.6ALGLDD327 pKa = 3.92LKK329 pKa = 9.88TLQTHH334 pKa = 5.07RR335 pKa = 11.84RR336 pKa = 11.84RR337 pKa = 11.84YY338 pKa = 9.75RR339 pKa = 11.84RR340 pKa = 11.84MAAEE344 pKa = 4.16ALVDD348 pKa = 4.0NPIPDD353 pKa = 3.79WDD355 pKa = 3.53GTTYY359 pKa = 10.89VSASSKK365 pKa = 11.11LEE367 pKa = 3.85VGKK370 pKa = 8.55TRR372 pKa = 11.84AIFACDD378 pKa = 3.1TRR380 pKa = 11.84SYY382 pKa = 11.04FAFSYY387 pKa = 10.91LLNQVQKK394 pKa = 9.94DD395 pKa = 3.44WRR397 pKa = 11.84NEE399 pKa = 3.78RR400 pKa = 11.84VLLDD404 pKa = 4.04PGNGGTVAMGARR416 pKa = 11.84LRR418 pKa = 11.84NAQKK422 pKa = 10.89GGGFNLMLDD431 pKa = 3.58YY432 pKa = 11.47DD433 pKa = 4.75DD434 pKa = 6.31FNSQHH439 pKa = 5.4STEE442 pKa = 3.96TMKK445 pKa = 10.63IVFEE449 pKa = 4.43EE450 pKa = 4.25TCKK453 pKa = 10.39IYY455 pKa = 10.56NAPAWYY461 pKa = 8.68TDD463 pKa = 3.74KK464 pKa = 11.22LCSSFDD470 pKa = 3.18KK471 pKa = 10.65MYY473 pKa = 10.49IRR475 pKa = 11.84QKK477 pKa = 10.92DD478 pKa = 3.84GLRR481 pKa = 11.84HH482 pKa = 4.58VAGTLMSGHH491 pKa = 7.15RR492 pKa = 11.84GTTFINSVLNAAYY505 pKa = 9.78LRR507 pKa = 11.84CGVGSGWFDD516 pKa = 3.12HH517 pKa = 6.82ALSLHH522 pKa = 6.26TGDD525 pKa = 5.04DD526 pKa = 3.7VYY528 pKa = 11.08IRR530 pKa = 11.84SNSRR534 pKa = 11.84SEE536 pKa = 3.82VSNILTRR543 pKa = 11.84AAEE546 pKa = 4.58FGCRR550 pKa = 11.84MNPTKK555 pKa = 10.6QSIGVKK561 pKa = 8.6NCEE564 pKa = 4.22FLRR567 pKa = 11.84CAYY570 pKa = 10.18NPYY573 pKa = 9.91YY574 pKa = 10.63AVGYY578 pKa = 9.26LCRR581 pKa = 11.84TVGTLVNGNWSGDD594 pKa = 3.66TPLTPHH600 pKa = 6.86EE601 pKa = 4.92ALTSLLTSLRR611 pKa = 11.84SLYY614 pKa = 10.3NRR616 pKa = 11.84SLGGGLGRR624 pKa = 11.84YY625 pKa = 7.71LASAIRR631 pKa = 11.84FRR633 pKa = 11.84TDD635 pKa = 3.71GISRR639 pKa = 11.84KK640 pKa = 9.28NLIGLLDD647 pKa = 3.55GRR649 pKa = 11.84IAIEE653 pKa = 4.82GGPCFNADD661 pKa = 2.99AKK663 pKa = 10.83IRR665 pKa = 11.84TCALKK670 pKa = 9.19NTIKK674 pKa = 10.63PSPLVDD680 pKa = 4.2KK681 pKa = 11.19NWDD684 pKa = 3.14AYY686 pKa = 9.38ATRR689 pKa = 11.84DD690 pKa = 3.65YY691 pKa = 10.82LVCHH695 pKa = 5.61TTDD698 pKa = 3.21LEE700 pKa = 4.55YY701 pKa = 11.12YY702 pKa = 10.25ALQNCGVSPTPLMVTTSYY720 pKa = 11.41EE721 pKa = 3.68KK722 pKa = 10.71GLNRR726 pKa = 11.84EE727 pKa = 4.14SEE729 pKa = 4.28EE730 pKa = 4.0VKK732 pKa = 10.42PLKK735 pKa = 9.77FCNMRR740 pKa = 11.84VSTARR745 pKa = 11.84GFATVSEE752 pKa = 4.18LLKK755 pKa = 10.59VDD757 pKa = 3.6TEE759 pKa = 4.71GGVLAHH765 pKa = 6.48YY766 pKa = 8.56PLLMLIKK773 pKa = 10.5DD774 pKa = 3.97SLSPSLIRR782 pKa = 11.84EE783 pKa = 4.07LCEE786 pKa = 3.84ADD788 pKa = 4.67GYY790 pKa = 9.29TPPSEE795 pKa = 4.53NIRR798 pKa = 11.84AYY800 pKa = 10.65AFGEE804 pKa = 4.01DD805 pKa = 3.86FRR807 pKa = 11.84THH809 pKa = 6.64NIIGRR814 pKa = 11.84LPYY817 pKa = 10.3SDD819 pKa = 4.93AAALQGKK826 pKa = 6.27TSCDD830 pKa = 3.59NIVADD835 pKa = 3.82YY836 pKa = 10.71KK837 pKa = 10.88IYY839 pKa = 10.97LL840 pKa = 3.86

Molecular weight:
93.79 kDa
Isoelectric point according different methods:






Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

1583

743

840

791.5

85.93

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

10.36 ± 1.48

1.832 ± 0.518

5.433 ± 0.588

4.738 ± 0.166

3.285 ± 0.055

8.718 ± 1.314

2.653 ± 0.211

3.538 ± 0.58

2.59 ± 1.315

10.36 ± 0.921

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.021 ± 0.002

4.043 ± 0.558

6.001 ± 1.238

2.716 ± 0.017

7.138 ± 0.281

6.57 ± 0.017

6.57 ± 0.202

7.202 ± 0.969

1.263 ± 0.22

2.969 ± 0.652

Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski