Goose circovirus (GoCV)

Taxonomy: Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cirlivirales; Circoviridae; Circovirus

Average proteome isoelectric point is 7.09

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 1 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|Q8AYV0|Q8AYV0_GOCV ATP-dependent helicase Rep OS=Goose circovirus OX=146032 GN=rep PE=3 SV=1
MM1 pKa = 7.77AKK3 pKa = 10.18NGNYY7 pKa = 9.84SYY9 pKa = 10.84KK10 pKa = 10.27RR11 pKa = 11.84WVFTINNPTFEE22 pKa = 5.2DD23 pKa = 4.07YY24 pKa = 11.18CSVVEE29 pKa = 5.51FCNLDD34 pKa = 3.26NCKK37 pKa = 9.84FAIVGEE43 pKa = 4.22EE44 pKa = 3.9KK45 pKa = 10.83GEE47 pKa = 4.24KK48 pKa = 10.01EE49 pKa = 4.29GTPHH53 pKa = 6.51LQGFLSLRR61 pKa = 11.84KK62 pKa = 8.91NAKK65 pKa = 9.52AAALEE70 pKa = 4.18EE71 pKa = 4.34KK72 pKa = 10.67LGGRR76 pKa = 11.84AWLSRR81 pKa = 11.84ARR83 pKa = 11.84GSDD86 pKa = 3.31EE87 pKa = 5.6DD88 pKa = 3.95NEE90 pKa = 4.65EE91 pKa = 4.28YY92 pKa = 10.42CSKK95 pKa = 10.57EE96 pKa = 3.61STYY99 pKa = 11.13LRR101 pKa = 11.84VGEE104 pKa = 4.16PNRR107 pKa = 11.84KK108 pKa = 8.88GRR110 pKa = 11.84SSDD113 pKa = 3.57LSDD116 pKa = 3.62AASDD120 pKa = 3.84VLAGLPITDD129 pKa = 3.67VARR132 pKa = 11.84KK133 pKa = 9.64YY134 pKa = 7.27PTTYY138 pKa = 11.11VMFGRR143 pKa = 11.84GLEE146 pKa = 4.04RR147 pKa = 11.84LRR149 pKa = 11.84QLIVEE154 pKa = 4.79TARR157 pKa = 11.84DD158 pKa = 3.5WKK160 pKa = 10.01TEE162 pKa = 3.9VIVLIGRR169 pKa = 11.84PGSGKK174 pKa = 9.9SRR176 pKa = 11.84YY177 pKa = 9.78AFEE180 pKa = 4.04FPARR184 pKa = 11.84EE185 pKa = 3.95KK186 pKa = 10.76YY187 pKa = 9.98YY188 pKa = 10.72KK189 pKa = 10.38SRR191 pKa = 11.84GKK193 pKa = 8.8WWDD196 pKa = 3.5GYY198 pKa = 10.75NGQDD202 pKa = 3.46VVVMDD207 pKa = 5.79DD208 pKa = 3.97FYY210 pKa = 11.92GWLPYY215 pKa = 10.72DD216 pKa = 4.19DD217 pKa = 5.71LLRR220 pKa = 11.84ICDD223 pKa = 4.02RR224 pKa = 11.84YY225 pKa = 9.66PLRR228 pKa = 11.84VEE230 pKa = 4.35YY231 pKa = 10.33KK232 pKa = 9.91GGMTQFVAKK241 pKa = 9.46TLIITSNRR249 pKa = 11.84EE250 pKa = 3.15PRR252 pKa = 11.84DD253 pKa = 3.23WYY255 pKa = 10.67KK256 pKa = 11.37CEE258 pKa = 4.01FDD260 pKa = 3.79VSALYY265 pKa = 10.38RR266 pKa = 11.84RR267 pKa = 11.84INQYY271 pKa = 11.13LILTPDD277 pKa = 3.85GYY279 pKa = 11.67APAPEE284 pKa = 3.96FMLPFKK290 pKa = 10.73INYY293 pKa = 8.42

Molecular weight: 33.86 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|Q8AYV0|Q8AYV0_GOCV ATP-dependent helicase Rep OS=Goose circovirus OX=146032 GN=rep PE=3 SV=1
MM1 pKa = 7.77AKK3 pKa = 10.18NGNYY7 pKa = 9.84SYY9 pKa = 10.84KK10 pKa = 10.27RR11 pKa = 11.84WVFTINNPTFEE22 pKa = 5.2DD23 pKa = 4.07YY24 pKa = 11.18CSVVEE29 pKa = 5.51FCNLDD34 pKa = 3.26NCKK37 pKa = 9.84FAIVGEE43 pKa = 4.22EE44 pKa = 3.9KK45 pKa = 10.83GEE47 pKa = 4.24KK48 pKa = 10.01EE49 pKa = 4.29GTPHH53 pKa = 6.51LQGFLSLRR61 pKa = 11.84KK62 pKa = 8.91NAKK65 pKa = 9.52AAALEE70 pKa = 4.18EE71 pKa = 4.34KK72 pKa = 10.67LGGRR76 pKa = 11.84AWLSRR81 pKa = 11.84ARR83 pKa = 11.84GSDD86 pKa = 3.31EE87 pKa = 5.6DD88 pKa = 3.95NEE90 pKa = 4.65EE91 pKa = 4.28YY92 pKa = 10.42CSKK95 pKa = 10.57EE96 pKa = 3.61STYY99 pKa = 11.13LRR101 pKa = 11.84VGEE104 pKa = 4.16PNRR107 pKa = 11.84KK108 pKa = 8.88GRR110 pKa = 11.84SSDD113 pKa = 3.57LSDD116 pKa = 3.62AASDD120 pKa = 3.84VLAGLPITDD129 pKa = 3.67VARR132 pKa = 11.84KK133 pKa = 9.64YY134 pKa = 7.27PTTYY138 pKa = 11.11VMFGRR143 pKa = 11.84GLEE146 pKa = 4.04RR147 pKa = 11.84LRR149 pKa = 11.84QLIVEE154 pKa = 4.79TARR157 pKa = 11.84DD158 pKa = 3.5WKK160 pKa = 10.01TEE162 pKa = 3.9VIVLIGRR169 pKa = 11.84PGSGKK174 pKa = 9.9SRR176 pKa = 11.84YY177 pKa = 9.78AFEE180 pKa = 4.04FPARR184 pKa = 11.84EE185 pKa = 3.95KK186 pKa = 10.76YY187 pKa = 9.98YY188 pKa = 10.72KK189 pKa = 10.38SRR191 pKa = 11.84GKK193 pKa = 8.8WWDD196 pKa = 3.5GYY198 pKa = 10.75NGQDD202 pKa = 3.46VVVMDD207 pKa = 5.79DD208 pKa = 3.97FYY210 pKa = 11.92GWLPYY215 pKa = 10.72DD216 pKa = 4.19DD217 pKa = 5.71LLRR220 pKa = 11.84ICDD223 pKa = 4.02RR224 pKa = 11.84YY225 pKa = 9.66PLRR228 pKa = 11.84VEE230 pKa = 4.35YY231 pKa = 10.33KK232 pKa = 9.91GGMTQFVAKK241 pKa = 9.46TLIITSNRR249 pKa = 11.84EE250 pKa = 3.15PRR252 pKa = 11.84DD253 pKa = 3.23WYY255 pKa = 10.67KK256 pKa = 11.37CEE258 pKa = 4.01FDD260 pKa = 3.79VSALYY265 pKa = 10.38RR266 pKa = 11.84RR267 pKa = 11.84INQYY271 pKa = 11.13LILTPDD277 pKa = 3.85GYY279 pKa = 11.67APAPEE284 pKa = 3.96FMLPFKK290 pKa = 10.73INYY293 pKa = 8.42

Molecular weight: 33.86 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

1

0

1

293

293

293

293.0

33.86

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.485 ± 0.0

2.048 ± 0.0

6.485 ± 0.0

7.509 ± 0.0

4.437 ± 0.0

7.85 ± 0.0

0.341 ± 0.0

4.096 ± 0.0

6.826 ± 0.0

8.191 ± 0.0

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.706 ± 0.0

4.437 ± 0.0

4.778 ± 0.0

1.706 ± 0.0

8.191 ± 0.0

5.461 ± 0.0

4.437 ± 0.0

5.802 ± 0.0

2.389 ± 0.0

6.826 ± 0.0
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski