Chimaeribacter arupi

Taxonomy: cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Yersiniaceae; Chimaeribacter

Average proteome isoelectric point is 6.53

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 4159 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A2N5EPZ0|A0A2N5EPZ0_9GAMM EamA family transporter OS=Chimaeribacter arupi OX=2060066 GN=CYR34_07315 PE=4 SV=1
MM1 pKa = 7.38NNGDD5 pKa = 3.62NGMDD9 pKa = 3.97IIYY12 pKa = 10.7SLLNKK17 pKa = 8.54RR18 pKa = 11.84QSMTTATLFSRR29 pKa = 11.84QTGNLISQIIDD40 pKa = 3.22ASQVISLTEE49 pKa = 3.77PSVITINNARR59 pKa = 11.84GWATGYY65 pKa = 10.4SRR67 pKa = 11.84SGDD70 pKa = 3.88DD71 pKa = 5.43LSLATQDD78 pKa = 3.53GTTLQYY84 pKa = 11.2RR85 pKa = 11.84HH86 pKa = 6.16FFAAGSAGTLVFDD99 pKa = 5.5DD100 pKa = 4.75GSGPATQAVFSHH112 pKa = 7.23DD113 pKa = 3.97AGSSSLTPVFKK124 pKa = 10.42AYY126 pKa = 9.52HH127 pKa = 6.23APVEE131 pKa = 4.2AAGAARR137 pKa = 11.84STQASAADD145 pKa = 3.53INAVADD151 pKa = 3.47VDD153 pKa = 4.58AADD156 pKa = 4.35TPTITINTFAGDD168 pKa = 3.75NIINYY173 pKa = 10.21AEE175 pKa = 4.27GQVEE179 pKa = 4.29QVLSGTTTGIEE190 pKa = 4.07AGQSLTVAFNSIVSFWTEE208 pKa = 3.71VQADD212 pKa = 4.35GSWQLTLNAASMYY225 pKa = 10.93DD226 pKa = 3.37LLRR229 pKa = 11.84YY230 pKa = 9.9GSTEE234 pKa = 3.34ITAEE238 pKa = 4.05SANAAGEE245 pKa = 4.16EE246 pKa = 4.36ATVSVPFQVLSDD258 pKa = 3.83WPSVTLNAFAGDD270 pKa = 3.95NVISGPEE277 pKa = 3.83DD278 pKa = 3.13QATQILSGSTSRR290 pKa = 11.84VEE292 pKa = 4.09AGQTVTLTLNGNTYY306 pKa = 8.73TATVDD311 pKa = 3.05ADD313 pKa = 4.45GYY315 pKa = 10.27WRR317 pKa = 11.84TSVPAADD324 pKa = 3.81VAALPDD330 pKa = 4.03GAQLVATVTNALGRR344 pKa = 11.84EE345 pKa = 4.26AGDD348 pKa = 3.66SATLTVNSSLPSLTVDD364 pKa = 4.31PFATDD369 pKa = 3.22NVLSDD374 pKa = 5.16AEE376 pKa = 4.17AQSAQTLSGTTTGVEE391 pKa = 3.68AGQAVTVTLNEE402 pKa = 3.81ITYY405 pKa = 8.07STTVAADD412 pKa = 3.71GSFSLSVPSADD423 pKa = 5.09LLALYY428 pKa = 10.32SGQTTIAARR437 pKa = 11.84AANLAGQEE445 pKa = 4.37TQGSEE450 pKa = 3.55ILTVDD455 pKa = 4.77FATARR460 pKa = 11.84LVVDD464 pKa = 4.72PVAGDD469 pKa = 3.5NYY471 pKa = 10.3INASEE476 pKa = 4.05SSYY479 pKa = 11.35LVLSGTTVDD488 pKa = 3.83VPAGSWVVITFNDD501 pKa = 4.06RR502 pKa = 11.84IFRR505 pKa = 11.84AEE507 pKa = 3.96VEE509 pKa = 4.46ADD511 pKa = 4.04GSWSTYY517 pKa = 10.53VSDD520 pKa = 4.46LVVNSFPDD528 pKa = 3.57GQYY531 pKa = 10.46PITFSAPGSAPVTLDD546 pKa = 2.86VGLYY550 pKa = 9.84IDD552 pKa = 4.82NQAQLNVQIDD562 pKa = 4.02TLFGDD567 pKa = 4.79DD568 pKa = 3.8VLTPGEE574 pKa = 4.15TLQDD578 pKa = 3.49QVLTGTTGITGAGQTISAEE597 pKa = 4.26LEE599 pKa = 4.48GVTHH603 pKa = 6.89TGSVDD608 pKa = 3.2NDD610 pKa = 4.08GNWTITVPAAALQALQNPNGYY631 pKa = 10.36VYY633 pKa = 10.92VQAADD638 pKa = 3.58LAGNSIAVGRR648 pKa = 11.84SFEE651 pKa = 4.91LVFSPATLTIDD662 pKa = 5.46PITGDD667 pKa = 3.91NILTAAEE674 pKa = 4.2TATPLTVSGVSYY686 pKa = 10.23RR687 pKa = 11.84VPEE690 pKa = 4.32GVTITVTLNGKK701 pKa = 9.56EE702 pKa = 4.13YY703 pKa = 7.83TTTAPGNDD711 pKa = 3.24TWSVQVPAADD721 pKa = 3.97LAGLTDD727 pKa = 3.91GVYY730 pKa = 9.55TVTAATINIDD740 pKa = 3.91LEE742 pKa = 4.51PVTTQQDD749 pKa = 3.89LTVDD753 pKa = 4.55LAPAPAFSVDD763 pKa = 3.88PVTGDD768 pKa = 3.9DD769 pKa = 3.4ILYY772 pKa = 10.17VDD774 pKa = 4.11EE775 pKa = 4.55TSGEE779 pKa = 3.96IVITGRR785 pKa = 11.84APVSAVGGSVTVTAFDD801 pKa = 4.04DD802 pKa = 3.54PAYY805 pKa = 10.44RR806 pKa = 11.84YY807 pKa = 7.59TGTVAADD814 pKa = 3.79GTWQVTVPEE823 pKa = 4.39YY824 pKa = 11.36NFGGTSNGVYY834 pKa = 9.85TLVAEE839 pKa = 4.71LTAPDD844 pKa = 3.91GTTTTTTHH852 pKa = 7.66DD853 pKa = 2.94ITINVWPFSGDD864 pKa = 3.29FYY866 pKa = 11.49FDD868 pKa = 4.79DD869 pKa = 4.02FTGDD873 pKa = 3.23STLTAEE879 pKa = 5.45EE880 pKa = 4.22RR881 pKa = 11.84TQDD884 pKa = 3.45QVFSGTFASEE894 pKa = 4.09EE895 pKa = 4.09NDD897 pKa = 3.29VSGLGITVYY906 pKa = 9.7MHH908 pKa = 7.42DD909 pKa = 4.17NDD911 pKa = 4.37GQTFAYY917 pKa = 9.41TGTTDD922 pKa = 3.67GNGRR926 pKa = 11.84WSVTIPAADD935 pKa = 3.64LQQLSEE941 pKa = 4.02GWSYY945 pKa = 7.65MTATATDD952 pKa = 3.42AAGNGASSSRR962 pKa = 11.84EE963 pKa = 3.22ADD965 pKa = 3.78FAVLPATGGTITVNPIAGDD984 pKa = 3.62NVLTADD990 pKa = 4.93EE991 pKa = 4.81ISDD994 pKa = 3.69GLTISGSSTYY1004 pKa = 9.8MGEE1007 pKa = 4.17RR1008 pKa = 11.84YY1009 pKa = 7.47TQIEE1013 pKa = 4.17VEE1015 pKa = 4.15INGTLRR1021 pKa = 11.84IYY1023 pKa = 11.25ADD1025 pKa = 4.12YY1026 pKa = 10.95EE1027 pKa = 4.49SDD1029 pKa = 2.92WSVTFSRR1036 pKa = 11.84EE1037 pKa = 4.0FIATLPDD1044 pKa = 3.67GPLTVTASGYY1054 pKa = 10.15DD1055 pKa = 3.34LSGNRR1060 pKa = 11.84VTTTATLEE1068 pKa = 4.25VNLSDD1073 pKa = 4.91VSTLTLDD1080 pKa = 3.63PVTGDD1085 pKa = 3.92DD1086 pKa = 4.89VISADD1091 pKa = 3.57EE1092 pKa = 4.33AGGEE1096 pKa = 4.07IVITGRR1102 pKa = 11.84APLSTQGGTVTVTAFDD1118 pKa = 4.13DD1119 pKa = 3.53PAYY1122 pKa = 10.4RR1123 pKa = 11.84YY1124 pKa = 6.88TATVEE1129 pKa = 4.89EE1130 pKa = 5.09GGTWQATVPAGAFSGRR1146 pKa = 11.84ANGVYY1151 pKa = 9.79TLVAEE1156 pKa = 4.71LTAPDD1161 pKa = 3.88GTVTTLNHH1169 pKa = 6.92DD1170 pKa = 3.68VTSNQLPFSGGFAFYY1185 pKa = 11.02VFAGDD1190 pKa = 3.78DD1191 pKa = 3.45VLNAEE1196 pKa = 4.87EE1197 pKa = 4.0QAQDD1201 pKa = 3.46QILEE1205 pKa = 4.36GEE1207 pKa = 4.52VFSDD1211 pKa = 4.67DD1212 pKa = 3.79GGNVAGLAVTIQMTTFDD1229 pKa = 4.33GQQFTYY1235 pKa = 8.05TTTTGEE1241 pKa = 3.69NGYY1244 pKa = 8.39WQVTLPSSDD1253 pKa = 4.43LEE1255 pKa = 3.95QLRR1258 pKa = 11.84NGWVNLVGTVADD1270 pKa = 4.16GAGNTLSNEE1279 pKa = 4.15SQFTVLAGIGTLTINPIAGDD1299 pKa = 3.68NVLTADD1305 pKa = 4.31EE1306 pKa = 4.73IGNGLVVSGSGEE1318 pKa = 4.1FLDD1321 pKa = 4.23MPLSLEE1327 pKa = 3.99VTINGVSQGFSDD1339 pKa = 4.83YY1340 pKa = 11.38SSDD1343 pKa = 2.81WSVTFTPQQLAGFPDD1358 pKa = 4.56GPLTVTVTAYY1368 pKa = 10.36DD1369 pKa = 3.37IEE1371 pKa = 4.89FNLITATSTLTVDD1384 pKa = 5.3LGDD1387 pKa = 4.16LQPLTFNPFGGDD1399 pKa = 3.55DD1400 pKa = 3.7NYY1402 pKa = 11.42LDD1404 pKa = 4.19EE1405 pKa = 6.73DD1406 pKa = 4.18EE1407 pKa = 5.81LEE1409 pKa = 4.27SDD1411 pKa = 4.1QLLSGQAGNLAAGSIVTLTLGEE1433 pKa = 4.01FTYY1436 pKa = 10.56QAEE1439 pKa = 4.42VQADD1443 pKa = 3.89HH1444 pKa = 6.48SWSVLIPSADD1454 pKa = 3.86LQTLPNDD1461 pKa = 3.22ATTGISATVTDD1472 pKa = 4.25ADD1474 pKa = 4.36GNLLAAGSHH1483 pKa = 5.26TFLLYY1488 pKa = 8.6RR1489 pKa = 11.84TPGEE1493 pKa = 4.1LNIDD1497 pKa = 3.73TLAGNGILTADD1508 pKa = 4.12EE1509 pKa = 4.25ATVPLVISGTITNGRR1524 pKa = 11.84VGAAVTVDD1532 pKa = 4.07LNGHH1536 pKa = 7.27LYY1538 pKa = 8.17QTTVTASDD1546 pKa = 4.28GSWQVSVPVEE1556 pKa = 4.34DD1557 pKa = 4.74LAQLGNTEE1565 pKa = 4.25YY1566 pKa = 10.01WVSATSTDD1574 pKa = 3.83LSGNEE1579 pKa = 3.75INGLNLLVVDD1589 pKa = 5.45LYY1591 pKa = 11.84VPVITLDD1598 pKa = 4.31PIAGDD1603 pKa = 3.86NIINAAEE1610 pKa = 3.92AAAGVVLSGQSSEE1623 pKa = 4.17AGGVVSVQLNGVAYY1637 pKa = 9.05EE1638 pKa = 4.16AGVDD1642 pKa = 4.83EE1643 pKa = 4.73EE1644 pKa = 5.53GSWQLALPNSALAEE1658 pKa = 4.33LEE1660 pKa = 4.07DD1661 pKa = 3.94GRR1663 pKa = 11.84YY1664 pKa = 7.65TLTLSQTGFNGQTTTVTEE1682 pKa = 4.2SLLLDD1687 pKa = 4.37ADD1689 pKa = 3.96PANRR1693 pKa = 11.84PVLRR1697 pKa = 11.84IHH1699 pKa = 7.15TISHH1703 pKa = 6.77DD1704 pKa = 3.65NVLNGAEE1711 pKa = 4.21LQSDD1715 pKa = 3.85QIITGSSEE1723 pKa = 3.94NVEE1726 pKa = 4.29SGQTLSLKK1734 pKa = 10.42IGGVTYY1740 pKa = 7.72TTQVQPGGGWSLIVPAEE1757 pKa = 4.11DD1758 pKa = 3.93LAALGDD1764 pKa = 3.86GGLTLRR1770 pKa = 11.84AGVTDD1775 pKa = 3.93ASGNRR1780 pKa = 11.84ATASRR1785 pKa = 11.84NLTIKK1790 pKa = 10.26SDD1792 pKa = 3.85RR1793 pKa = 11.84DD1794 pKa = 3.58GLSIDD1799 pKa = 4.35PVTGDD1804 pKa = 3.77NLINAADD1811 pKa = 3.8AEE1813 pKa = 4.55GAITLTGHH1821 pKa = 6.04TDD1823 pKa = 3.71GVRR1826 pKa = 11.84HH1827 pKa = 5.99GATVRR1832 pKa = 11.84LTLNGEE1838 pKa = 4.03HH1839 pKa = 5.76YY1840 pKa = 7.81TAKK1843 pKa = 10.3VGKK1846 pKa = 9.86DD1847 pKa = 3.57GSWSAKK1853 pKa = 9.74VPAADD1858 pKa = 3.35VAALEE1863 pKa = 4.61EE1864 pKa = 5.01GSATLTACVKK1874 pKa = 9.85SACGQMLYY1882 pKa = 10.91AKK1884 pKa = 10.34AVLTVDD1890 pKa = 3.31TRR1892 pKa = 11.84APEE1895 pKa = 4.13LALLPVTGDD1904 pKa = 3.56NLISLQEE1911 pKa = 4.04AQAGFALTGSAGIAAAGLLVLVVLNGVEE1939 pKa = 4.19YY1940 pKa = 10.2QGKK1943 pKa = 8.51VQASGDD1949 pKa = 3.47WTVAIPAGTLADD1961 pKa = 4.17QPAGDD1966 pKa = 4.01YY1967 pKa = 10.28PLTVSLTDD1975 pKa = 3.26TAGNLTSLTSVVTLEE1990 pKa = 4.3AAPDD1994 pKa = 3.56ADD1996 pKa = 3.75ATEE1999 pKa = 4.41TAALTVTSQTVAASADD2015 pKa = 3.7STLTSALAVPDD2026 pKa = 4.19TATDD2030 pKa = 3.71TADD2033 pKa = 2.94GTYY2036 pKa = 10.45AIGGQTLTLTEE2047 pKa = 4.37SGGEE2051 pKa = 3.91ALGGSGNDD2059 pKa = 3.53TILLNTLDD2067 pKa = 4.37FLHH2070 pKa = 7.2IDD2072 pKa = 4.04GGSGTDD2078 pKa = 3.35TLLLAGSDD2086 pKa = 3.36QHH2088 pKa = 8.28LDD2090 pKa = 3.34LTTLGLKK2097 pKa = 9.77IEE2099 pKa = 4.97NIDD2102 pKa = 4.76IFDD2105 pKa = 4.87LGNGSNSLTLGLHH2118 pKa = 5.09EE2119 pKa = 5.32AEE2121 pKa = 4.65TVRR2124 pKa = 11.84DD2125 pKa = 3.94TPEE2128 pKa = 3.39EE2129 pKa = 4.02SLFIRR2134 pKa = 11.84GQGGSQLTLAGDD2146 pKa = 4.13NTWEE2150 pKa = 3.97TSGQRR2155 pKa = 11.84EE2156 pKa = 4.21VGGLLFDD2163 pKa = 4.44VYY2165 pKa = 10.61HH2166 pKa = 5.88ATGLEE2171 pKa = 4.21SADD2174 pKa = 4.35LLVQQGILVQQGG2186 pKa = 2.84

Molecular weight: 225.74 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A2N5ELK9|A0A2N5ELK9_9GAMM FMN-binding protein MioC OS=Chimaeribacter arupi OX=2060066 GN=CYR34_13685 PE=4 SV=1
MM1 pKa = 7.45KK2 pKa = 9.51RR3 pKa = 11.84TFQPSVLKK11 pKa = 10.6RR12 pKa = 11.84NRR14 pKa = 11.84SHH16 pKa = 7.16GFRR19 pKa = 11.84ARR21 pKa = 11.84MATKK25 pKa = 10.4NGRR28 pKa = 11.84QVLARR33 pKa = 11.84RR34 pKa = 11.84RR35 pKa = 11.84AKK37 pKa = 10.25GRR39 pKa = 11.84ARR41 pKa = 11.84LSVSKK46 pKa = 10.99

Molecular weight: 5.37 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

4159

0

4159

1358501

15

6646

326.6

35.87

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

10.823 ± 0.055

1.017 ± 0.014

5.151 ± 0.038

5.344 ± 0.037

3.744 ± 0.028

7.739 ± 0.037

2.388 ± 0.022

5.206 ± 0.035

3.541 ± 0.038

11.169 ± 0.049

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.625 ± 0.024

3.406 ± 0.031

4.924 ± 0.03

4.633 ± 0.037

5.901 ± 0.047

5.557 ± 0.032

5.504 ± 0.065

7.129 ± 0.035

1.416 ± 0.016

2.782 ± 0.021
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski