Veillonella montpellierensis DNF00314

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Firmicutes; Negativicutes; Veillonellales; Veillonellaceae; Veillonella; Veillonella montpellierensis

Average proteome isoelectric point is 6.3

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 1513 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A096AKJ3|A0A096AKJ3_9FIRM Uncharacterized protein OS=Veillonella montpellierensis DNF00314 OX=1401067 GN=HMPREF0872_04365 PE=4 SV=1
MM1 pKa = 7.92CIQLDD6 pKa = 3.84SFAIVQDD13 pKa = 3.39GEE15 pKa = 4.32NYY17 pKa = 9.21YY18 pKa = 10.62KK19 pKa = 10.42EE20 pKa = 4.15YY21 pKa = 10.58SNEE24 pKa = 3.82YY25 pKa = 8.28TGEE28 pKa = 4.18GEE30 pKa = 4.27ILCEE34 pKa = 4.53IPAIDD39 pKa = 5.2DD40 pKa = 3.7GVEE43 pKa = 3.85ALDD46 pKa = 3.89NLFKK50 pKa = 10.89RR51 pKa = 11.84LPSFITIEE59 pKa = 4.02EE60 pKa = 4.22MFDD63 pKa = 3.08IAIKK67 pKa = 10.65CKK69 pKa = 10.11LATINDD75 pKa = 3.33IKK77 pKa = 10.94EE78 pKa = 4.04WIVNGNCEE86 pKa = 3.74

Molecular weight: 9.82 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A096BVW9|A0A096BVW9_9FIRM Nitrate reductase OS=Veillonella montpellierensis DNF00314 OX=1401067 GN=HMPREF0872_06985 PE=4 SV=1
MM1 pKa = 7.43NGLRR5 pKa = 11.84KK6 pKa = 9.25EE7 pKa = 3.89RR8 pKa = 11.84RR9 pKa = 11.84ITKK12 pKa = 8.94NSEE15 pKa = 3.27YY16 pKa = 10.61RR17 pKa = 11.84LVYY20 pKa = 10.17KK21 pKa = 10.44HH22 pKa = 6.24GNYY25 pKa = 9.68EE26 pKa = 3.91VGRR29 pKa = 11.84LCVIYY34 pKa = 10.35RR35 pKa = 11.84MPVAKK40 pKa = 9.94QATRR44 pKa = 11.84IGFVTGKK51 pKa = 10.43KK52 pKa = 9.68VGCAVEE58 pKa = 4.14RR59 pKa = 11.84NRR61 pKa = 11.84ARR63 pKa = 11.84RR64 pKa = 11.84LLKK67 pKa = 9.92EE68 pKa = 4.02VYY70 pKa = 9.6RR71 pKa = 11.84LHH73 pKa = 6.1QHH75 pKa = 7.3DD76 pKa = 3.78IRR78 pKa = 11.84EE79 pKa = 4.72GYY81 pKa = 9.59HH82 pKa = 6.34IVMIGRR88 pKa = 11.84AKK90 pKa = 10.88LSTATYY96 pKa = 9.46AQAEE100 pKa = 4.31KK101 pKa = 10.6EE102 pKa = 3.93ILYY105 pKa = 10.79LLGRR109 pKa = 11.84SKK111 pKa = 11.14LMKK114 pKa = 10.36SS115 pKa = 3.3

Molecular weight: 13.45 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

1513

0

1513

482565

37

3115

318.9

35.52

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.788 ± 0.067

1.168 ± 0.022

5.644 ± 0.057

6.466 ± 0.072

3.626 ± 0.045

7.177 ± 0.076

2.402 ± 0.038

8.042 ± 0.075

6.244 ± 0.068

9.019 ± 0.074

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

3.004 ± 0.034

4.258 ± 0.066

3.497 ± 0.037

3.47 ± 0.038

4.441 ± 0.054

5.727 ± 0.047

6.114 ± 0.059

7.327 ± 0.05

0.892 ± 0.021

3.695 ± 0.044
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski