Human papillomavirus type 203

Taxonomy: Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Papovaviricetes; Zurhausenvirales; Papillomaviridae; unclassified Papillomaviridae; Human papillomavirus types

Average proteome isoelectric point is 6.34

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 7 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A2L1K401|A0A2L1K401_9PAPI Regulatory protein E2 OS=Human papillomavirus type 203 OX=2093789 GN=E2 PE=3 SV=1
MM1 pKa = 7.42SLTRR5 pKa = 11.84ARR7 pKa = 11.84RR8 pKa = 11.84VKK10 pKa = 10.33RR11 pKa = 11.84DD12 pKa = 3.33SVQNLYY18 pKa = 9.71NQCQLTGNCLPDD30 pKa = 3.28VKK32 pKa = 10.99NKK34 pKa = 10.04VEE36 pKa = 4.14GTTLADD42 pKa = 3.35KK43 pKa = 10.52LLKK46 pKa = 10.12IFSSIIYY53 pKa = 10.23LGGLSIGTGKK63 pKa = 8.72GTGGSTGYY71 pKa = 8.83TPLGGTTGGGRR82 pKa = 11.84VGTGGTVVRR91 pKa = 11.84PNVVVEE97 pKa = 4.04PLGPTDD103 pKa = 3.78IVPVDD108 pKa = 3.64TLNPNSSSIVPLLEE122 pKa = 4.59AGPDD126 pKa = 3.6IIISEE131 pKa = 4.47SAPGPKK137 pKa = 9.84VNLPDD142 pKa = 4.43AGTDD146 pKa = 3.52LGISEE151 pKa = 5.24LDD153 pKa = 3.04IVTTSDD159 pKa = 3.29PVSDD163 pKa = 3.75VTIGNAGGPTVSTSEE178 pKa = 4.24DD179 pKa = 3.22SVAIIDD185 pKa = 3.94VQPASSTPRR194 pKa = 11.84RR195 pKa = 11.84VATSTYY201 pKa = 10.16NNPSYY206 pKa = 9.93VTVYY210 pKa = 10.4SQSTLAEE217 pKa = 3.98EE218 pKa = 4.25TSANINVFVDD228 pKa = 3.51SAFGGDD234 pKa = 3.78VIGSSGQDD242 pKa = 2.81IPLEE246 pKa = 4.19TFNVSSDD253 pKa = 3.29LAEE256 pKa = 4.34FEE258 pKa = 4.45IEE260 pKa = 4.14EE261 pKa = 4.52PPRR264 pKa = 11.84TSTPRR269 pKa = 11.84DD270 pKa = 3.42TIEE273 pKa = 4.5RR274 pKa = 11.84ALQRR278 pKa = 11.84ARR280 pKa = 11.84DD281 pKa = 3.89LYY283 pKa = 9.81QRR285 pKa = 11.84RR286 pKa = 11.84VQQVRR291 pKa = 11.84TRR293 pKa = 11.84NVDD296 pKa = 3.73FLGRR300 pKa = 11.84PQMAVQFQFEE310 pKa = 4.32NPAFEE315 pKa = 5.95DD316 pKa = 4.96DD317 pKa = 3.2ITLTFEE323 pKa = 4.07QDD325 pKa = 3.24LNQLATAAPDD335 pKa = 3.56ADD337 pKa = 3.77FADD340 pKa = 4.92VIRR343 pKa = 11.84LHH345 pKa = 6.5RR346 pKa = 11.84PRR348 pKa = 11.84YY349 pKa = 8.97SVTDD353 pKa = 3.44AGTVRR358 pKa = 11.84VSRR361 pKa = 11.84LGQRR365 pKa = 11.84GTIHH369 pKa = 6.15TRR371 pKa = 11.84SGLQIGQQVHH381 pKa = 6.5FYY383 pKa = 11.02YY384 pKa = 10.49DD385 pKa = 2.97ISDD388 pKa = 3.89IEE390 pKa = 3.97PAEE393 pKa = 4.48AIEE396 pKa = 3.96LTLLGEE402 pKa = 4.58HH403 pKa = 6.48SGEE406 pKa = 3.88AAVVNAQSEE415 pKa = 4.91STVVDD420 pKa = 3.79AEE422 pKa = 4.35NSNSPFLYY430 pKa = 10.1PEE432 pKa = 4.42EE433 pKa = 4.13EE434 pKa = 4.97LIDD437 pKa = 3.88VPTEE441 pKa = 4.1DD442 pKa = 4.98FSDD445 pKa = 3.46SHH447 pKa = 7.57LVLSSNSRR455 pKa = 11.84RR456 pKa = 11.84SYY458 pKa = 9.21ITTPTLPPGTALRR471 pKa = 11.84VFIDD475 pKa = 4.49DD476 pKa = 3.73YY477 pKa = 11.94ANGLFVSYY485 pKa = 10.42PEE487 pKa = 4.78TYY489 pKa = 10.31NPPQIIVPAEE499 pKa = 3.9NLPPTVLIDD508 pKa = 3.67SFNSNDD514 pKa = 3.97FILHH518 pKa = 6.23PSHH521 pKa = 6.74NKK523 pKa = 8.03RR524 pKa = 11.84RR525 pKa = 11.84KK526 pKa = 9.04RR527 pKa = 11.84KK528 pKa = 9.99RR529 pKa = 11.84GDD531 pKa = 3.05VV532 pKa = 3.33

Molecular weight: 57.41 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A2L1K403|A0A2L1K403_9PAPI Major capsid protein L1 OS=Human papillomavirus type 203 OX=2093789 GN=L1 PE=3 SV=1
MM1 pKa = 7.47EE2 pKa = 4.9SLRR5 pKa = 11.84EE6 pKa = 3.93RR7 pKa = 11.84FDD9 pKa = 3.65ALQEE13 pKa = 3.98KK14 pKa = 10.4LIEE17 pKa = 4.36IYY19 pKa = 10.4EE20 pKa = 4.38AGSTNLEE27 pKa = 4.07DD28 pKa = 5.48QIKK31 pKa = 9.79HH32 pKa = 4.58WDD34 pKa = 3.28IVRR37 pKa = 11.84KK38 pKa = 9.69EE39 pKa = 3.95SVIMHH44 pKa = 6.28FARR47 pKa = 11.84RR48 pKa = 11.84KK49 pKa = 8.8GLTRR53 pKa = 11.84LGLQQLPALTVSEE66 pKa = 4.63TNAKK70 pKa = 8.7NAIMMSIYY78 pKa = 10.31LQSLNNSQYY87 pKa = 11.49ASEE90 pKa = 4.18SWGLSDD96 pKa = 4.41TSLEE100 pKa = 4.32LFLTAPMHH108 pKa = 5.26TFKK111 pKa = 11.05KK112 pKa = 9.76SGYY115 pKa = 8.92SVDD118 pKa = 3.62VLFDD122 pKa = 3.73NDD124 pKa = 3.36EE125 pKa = 4.77DD126 pKa = 3.96NLYY129 pKa = 10.19TYY131 pKa = 7.36TAWRR135 pKa = 11.84FVYY138 pKa = 10.55YY139 pKa = 10.28QDD141 pKa = 6.3DD142 pKa = 3.56EE143 pKa = 5.28GEE145 pKa = 4.04WHH147 pKa = 6.29KK148 pKa = 11.39VEE150 pKa = 5.48SGVDD154 pKa = 3.41YY155 pKa = 11.37DD156 pKa = 4.33GIFYY160 pKa = 8.73KK161 pKa = 10.38TVEE164 pKa = 4.22NHH166 pKa = 4.14TEE168 pKa = 3.84YY169 pKa = 11.11YY170 pKa = 10.11IRR172 pKa = 11.84FQDD175 pKa = 3.66DD176 pKa = 3.25APRR179 pKa = 11.84FSRR182 pKa = 11.84TGRR185 pKa = 11.84WTVKK189 pKa = 10.44YY190 pKa = 9.94KK191 pKa = 10.76SQTISTSVTSTSGSDD206 pKa = 3.26PVSSSEE212 pKa = 4.9RR213 pKa = 11.84PTQQSSDD220 pKa = 3.7TLDD223 pKa = 4.39APPQPKK229 pKa = 9.7KK230 pKa = 10.71FRR232 pKa = 11.84VRR234 pKa = 11.84PPQQTGPSRR243 pKa = 11.84VSSSSNSKK251 pKa = 5.43TTKK254 pKa = 10.17KK255 pKa = 10.25EE256 pKa = 4.05SPKK259 pKa = 9.01TRR261 pKa = 11.84LRR263 pKa = 11.84RR264 pKa = 11.84RR265 pKa = 11.84RR266 pKa = 11.84GEE268 pKa = 4.09GEE270 pKa = 3.66PTTRR274 pKa = 11.84ATNRR278 pKa = 11.84RR279 pKa = 11.84TTSGRR284 pKa = 11.84ARR286 pKa = 11.84RR287 pKa = 11.84RR288 pKa = 11.84LEE290 pKa = 3.66YY291 pKa = 10.16AYY293 pKa = 7.06PTPEE297 pKa = 3.77QVGSVHH303 pKa = 7.48RR304 pKa = 11.84LPQGSNLGRR313 pKa = 11.84LGRR316 pKa = 11.84LQEE319 pKa = 4.12EE320 pKa = 4.38ARR322 pKa = 11.84DD323 pKa = 3.85PPVVLLRR330 pKa = 11.84GLANTLKK337 pKa = 10.55CFRR340 pKa = 11.84FRR342 pKa = 11.84CKK344 pKa = 10.02QKK346 pKa = 10.74YY347 pKa = 9.45KK348 pKa = 11.17GLFQHH353 pKa = 7.24ISTTFSWVGEE363 pKa = 4.27GYY365 pKa = 10.31EE366 pKa = 3.93RR367 pKa = 11.84LGNARR372 pKa = 11.84ILIAFQSTAQRR383 pKa = 11.84EE384 pKa = 4.25KK385 pKa = 10.03FLAVAVLPKK394 pKa = 9.71GTEE397 pKa = 3.89VVYY400 pKa = 10.99GSLNALL406 pKa = 3.72

Molecular weight: 46.42 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

7

0

7

2370

70

613

338.6

38.16

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.485 ± 0.185

2.236 ± 1.004

6.371 ± 0.406

6.287 ± 0.64

4.388 ± 0.418

5.654 ± 0.644

1.772 ± 0.274

4.895 ± 0.653

5.021 ± 0.99

9.536 ± 0.79

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.857 ± 0.574

5.232 ± 0.683

5.485 ± 0.85

4.051 ± 0.344

5.907 ± 0.903

7.764 ± 0.693

6.54 ± 0.812

6.962 ± 0.596

1.181 ± 0.339

3.376 ± 0.307
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski