Maize yellow mosaic virus

Taxonomy: Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Sobelivirales; Solemoviridae; Polerovirus

Average proteome isoelectric point is 8.23

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 6 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A191T7R1|A0A191T7R1_9LUTE Coat protein OS=Maize yellow mosaic virus OX=1856642 PE=4 SV=1
MM1 pKa = 7.22QKK3 pKa = 10.27LSSVAFFLCCLLCYY17 pKa = 9.06ATYY20 pKa = 7.68PTRR23 pKa = 11.84GDD25 pKa = 3.53FLEE28 pKa = 4.6MYY30 pKa = 9.86GLPLRR35 pKa = 11.84GTQFGLEE42 pKa = 4.18EE43 pKa = 4.16TSLLPRR49 pKa = 11.84NASLPFKK56 pKa = 10.59FLLAPDD62 pKa = 3.62SCIEE66 pKa = 3.73ISYY69 pKa = 10.17SALSRR74 pKa = 11.84EE75 pKa = 4.26IARR78 pKa = 11.84LALQDD83 pKa = 3.56LHH85 pKa = 6.63TISLAGSRR93 pKa = 11.84ALSSSWKK100 pKa = 10.38GFAEE104 pKa = 4.14EE105 pKa = 4.53WNTSVVKK112 pKa = 10.4LAHH115 pKa = 5.96ATSGFYY121 pKa = 9.9QQASDD126 pKa = 4.03YY127 pKa = 10.88VVSCVLEE134 pKa = 4.0LLGSCLVAIIYY145 pKa = 7.61TWSFFISSLFWVVTFMLQHH164 pKa = 5.16YY165 pKa = 6.74TPHH168 pKa = 5.91VLSIAVLYY176 pKa = 10.43ICTTLLVRR184 pKa = 11.84LATKK188 pKa = 10.33IFGGWPVMMISWIGTSTLGFSKK210 pKa = 9.68TLLFKK215 pKa = 10.9GSSISYY221 pKa = 7.6EE222 pKa = 3.92IPTPGYY228 pKa = 10.11KK229 pKa = 10.02SIEE232 pKa = 4.21IPQKK236 pKa = 9.98PPKK239 pKa = 10.48DD240 pKa = 3.44CVLLVQHH247 pKa = 6.82NDD249 pKa = 3.16ALNSPGGYY257 pKa = 9.68ASCVRR262 pKa = 11.84LLNGSNALLTAEE274 pKa = 4.67HH275 pKa = 6.17VAAQKK280 pKa = 11.34GEE282 pKa = 4.17LLVASTRR289 pKa = 11.84TGNKK293 pKa = 9.14IKK295 pKa = 10.79LSLFNRR301 pKa = 11.84ILTTTNSDD309 pKa = 2.75VSLFQGPPGWEE320 pKa = 3.79SLLGCKK326 pKa = 9.73AADD329 pKa = 3.37ITPVDD334 pKa = 3.66GLTTCEE340 pKa = 3.58ASLFRR345 pKa = 11.84FDD347 pKa = 3.99GHH349 pKa = 5.47WMRR352 pKa = 11.84SNASLVGTEE361 pKa = 3.87EE362 pKa = 4.7TYY364 pKa = 11.51VSVLSNTEE372 pKa = 3.66EE373 pKa = 5.09GYY375 pKa = 10.92SGTPYY380 pKa = 10.68FNGKK384 pKa = 9.77SILGVHH390 pKa = 5.99VGGNATQTNNLMAPIPSIPGLTKK413 pKa = 9.72HH414 pKa = 6.43RR415 pKa = 11.84YY416 pKa = 8.53VFEE419 pKa = 4.19SPQLKK424 pKa = 10.0GRR426 pKa = 11.84LFTEE430 pKa = 4.21QEE432 pKa = 4.17VEE434 pKa = 4.07QLEE437 pKa = 4.18VDD439 pKa = 2.85IDD441 pKa = 3.86EE442 pKa = 4.97AFKK445 pKa = 10.67KK446 pKa = 10.64AYY448 pKa = 10.25DD449 pKa = 3.72LVHH452 pKa = 6.8FKK454 pKa = 11.15SKK456 pKa = 9.38TGRR459 pKa = 11.84NWADD463 pKa = 3.29YY464 pKa = 10.39EE465 pKa = 4.56DD466 pKa = 5.73DD467 pKa = 3.87ISYY470 pKa = 8.15EE471 pKa = 3.93APKK474 pKa = 10.42FQGKK478 pKa = 9.11RR479 pKa = 11.84RR480 pKa = 11.84TRR482 pKa = 11.84FRR484 pKa = 11.84PRR486 pKa = 11.84KK487 pKa = 9.06QNGLAHH493 pKa = 7.32PYY495 pKa = 10.16SLARR499 pKa = 11.84RR500 pKa = 11.84YY501 pKa = 8.86FKK503 pKa = 10.54QRR505 pKa = 11.84YY506 pKa = 6.24SQQGGGSVGQQDD518 pKa = 3.19RR519 pKa = 11.84RR520 pKa = 11.84LSHH523 pKa = 6.74RR524 pKa = 11.84ADD526 pKa = 3.47GCSTNCGISHH536 pKa = 6.56EE537 pKa = 4.61TPKK540 pKa = 10.26EE541 pKa = 3.89QPEE544 pKa = 4.09AAIKK548 pKa = 9.63AQNFASYY555 pKa = 10.39FSSLYY560 pKa = 9.86KK561 pKa = 10.17WEE563 pKa = 4.26VCDD566 pKa = 4.51TRR568 pKa = 11.84SEE570 pKa = 4.45TPGFEE575 pKa = 4.49TCGSLPRR582 pKa = 11.84YY583 pKa = 9.85YY584 pKa = 9.53FTKK587 pKa = 10.4QKK589 pKa = 10.9EE590 pKa = 3.93EE591 pKa = 4.42SEE593 pKa = 4.13WGRR596 pKa = 11.84LLAEE600 pKa = 4.72GNPALAEE607 pKa = 4.16KK608 pKa = 10.7VSGFGWPQFGPAAEE622 pKa = 4.29LKK624 pKa = 10.42SLRR627 pKa = 11.84LQAQRR632 pKa = 11.84WLSRR636 pKa = 11.84AEE638 pKa = 3.99SAKK641 pKa = 10.38IPSAEE646 pKa = 3.78DD647 pKa = 3.1RR648 pKa = 11.84EE649 pKa = 4.24RR650 pKa = 11.84VIRR653 pKa = 11.84KK654 pKa = 6.66TVEE657 pKa = 3.73AYY659 pKa = 7.7KK660 pKa = 9.8TCQTQCPKK668 pKa = 10.3TSQSNLLVWEE678 pKa = 4.38NFLEE682 pKa = 4.3DD683 pKa = 4.04FKK685 pKa = 11.47QAVFSLEE692 pKa = 3.57PDD694 pKa = 3.26AGVGVPFVGYY704 pKa = 10.19DD705 pKa = 3.04KK706 pKa = 9.97RR707 pKa = 11.84THH709 pKa = 6.47RR710 pKa = 11.84GWIEE714 pKa = 4.45DD715 pKa = 3.71PTLLPVLARR724 pKa = 11.84MTFDD728 pKa = 4.25RR729 pKa = 11.84LHH731 pKa = 6.74KK732 pKa = 9.41MSTVKK737 pKa = 10.56FEE739 pKa = 4.37HH740 pKa = 6.11LTAEE744 pKa = 4.34EE745 pKa = 4.14LVQAGLCDD753 pKa = 5.02PIRR756 pKa = 11.84LFVKK760 pKa = 10.72GEE762 pKa = 3.72PHH764 pKa = 6.07KK765 pKa = 10.35QAKK768 pKa = 9.74LDD770 pKa = 3.49EE771 pKa = 4.35GRR773 pKa = 11.84YY774 pKa = 8.74RR775 pKa = 11.84LIMSVSLLDD784 pKa = 3.51QLVARR789 pKa = 11.84VLFQNQNKK797 pKa = 9.66RR798 pKa = 11.84EE799 pKa = 3.93IALWRR804 pKa = 11.84AIPSKK809 pKa = 10.55PGFGLSTDD817 pKa = 3.55DD818 pKa = 3.46QSRR821 pKa = 11.84EE822 pKa = 3.91FVQNLARR829 pKa = 11.84QCGVSSDD836 pKa = 3.95RR837 pKa = 11.84LLQEE841 pKa = 4.21WQLHH845 pKa = 4.78TVPTDD850 pKa = 3.2CSGFDD855 pKa = 3.21WSVAEE860 pKa = 5.47WMLQDD865 pKa = 4.67DD866 pKa = 4.11MEE868 pKa = 4.39VRR870 pKa = 11.84NRR872 pKa = 11.84LTRR875 pKa = 11.84NNTDD879 pKa = 2.87LTRR882 pKa = 11.84RR883 pKa = 11.84LRR885 pKa = 11.84ACWLKK890 pKa = 10.91CISNSVLCLSDD901 pKa = 3.31GTLLAQRR908 pKa = 11.84VAGVQKK914 pKa = 10.39SGSYY918 pKa = 8.25NTSSSNSRR926 pKa = 11.84IRR928 pKa = 11.84VMAAYY933 pKa = 9.93HH934 pKa = 6.74CGATWAMAMGDD945 pKa = 3.95DD946 pKa = 4.15ALEE949 pKa = 4.37SVDD952 pKa = 3.62TCLDD956 pKa = 3.43VYY958 pKa = 11.17KK959 pKa = 10.94DD960 pKa = 3.43LGFKK964 pKa = 10.81VEE966 pKa = 4.03VSKK969 pKa = 10.95QLEE972 pKa = 4.41FCSHH976 pKa = 4.85VFEE979 pKa = 5.34KK980 pKa = 10.75EE981 pKa = 3.64HH982 pKa = 6.75LARR985 pKa = 11.84PVNQNKK991 pKa = 9.32MIYY994 pKa = 9.64KK995 pKa = 10.2LVYY998 pKa = 9.95GYY1000 pKa = 11.16NPANGSSEE1008 pKa = 4.05VLQRR1012 pKa = 11.84YY1013 pKa = 9.24LDD1015 pKa = 3.37ACMSVLHH1022 pKa = 6.23EE1023 pKa = 4.64LRR1025 pKa = 11.84HH1026 pKa = 6.05DD1027 pKa = 4.05PEE1029 pKa = 4.66TVEE1032 pKa = 6.24LLYY1035 pKa = 10.63KK1036 pKa = 10.04WLVSPVQQQKK1046 pKa = 8.01VV1047 pKa = 3.19

Molecular weight: 117.67 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A191T7S4|A0A191T7S4_9LUTE Movement protein OS=Maize yellow mosaic virus OX=1856642 PE=3 SV=1
MM1 pKa = 6.87NTGGRR6 pKa = 11.84NGRR9 pKa = 11.84RR10 pKa = 11.84ARR12 pKa = 11.84NRR14 pKa = 11.84RR15 pKa = 11.84RR16 pKa = 11.84ARR18 pKa = 11.84NNNRR22 pKa = 11.84AQPVVVVAANPRR34 pKa = 11.84RR35 pKa = 11.84GRR37 pKa = 11.84PRR39 pKa = 11.84RR40 pKa = 11.84RR41 pKa = 11.84RR42 pKa = 11.84RR43 pKa = 11.84PSGNTAGRR51 pKa = 11.84PGVRR55 pKa = 11.84RR56 pKa = 11.84GSRR59 pKa = 11.84EE60 pKa = 3.68TFVFSKK66 pKa = 11.02DD67 pKa = 3.43SLTGNASGKK76 pKa = 7.79VTFGPSLSEE85 pKa = 3.84CAAFSGGILKK95 pKa = 10.27AYY97 pKa = 10.21HH98 pKa = 6.75EE99 pKa = 4.41YY100 pKa = 10.44KK101 pKa = 9.82ISKK104 pKa = 9.83IILEE108 pKa = 5.09FISEE112 pKa = 4.21AASTAEE118 pKa = 3.73GSIAYY123 pKa = 9.5EE124 pKa = 3.8LDD126 pKa = 3.19PHH128 pKa = 6.74NKK130 pKa = 9.68LSSLASTINKK140 pKa = 9.5FSIVKK145 pKa = 9.57GGRR148 pKa = 11.84RR149 pKa = 11.84VFASNQIGGGVWRR162 pKa = 11.84DD163 pKa = 3.37SSEE166 pKa = 4.04DD167 pKa = 3.28QCAILYY173 pKa = 9.54KK174 pKa = 10.95GNGKK178 pKa = 10.21SSVAGSFRR186 pKa = 11.84ITIEE190 pKa = 4.21VNVQNPKK197 pKa = 10.48

Molecular weight: 21.4 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

6

0

6

2986

192

1047

497.7

55.21

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.368 ± 0.48

1.808 ± 0.367

4.086 ± 0.364

5.626 ± 0.3

4.052 ± 0.491

7.167 ± 0.455

1.842 ± 0.377

4.153 ± 0.329

4.789 ± 0.471

9.277 ± 1.564

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.44 ± 0.152

4.253 ± 0.67

5.894 ± 0.847

4.22 ± 0.356

6.899 ± 1.043

9.913 ± 0.699

6.095 ± 0.363

6.196 ± 0.323

1.574 ± 0.236

3.315 ± 0.241
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski