Torque teno tupaia virus (isolate Tbc-TTV14)

Taxonomy: Viruses; Anelloviridae; Deltatorquevirus; Torque teno tupaia virus

Average proteome isoelectric point is 6.55

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>sp|Q91PQ3|ORF3_TTVD1 Uncharacterized ORF3 protein OS=Torque teno tupaia virus (isolate Tbc-TTV14) OX=766185 GN=ORF3 PE=4 SV=1
MM1 pKa = 8.05DD2 pKa = 5.25PAKK5 pKa = 10.17IWWHH9 pKa = 5.7SCLLSHH15 pKa = 7.52KK16 pKa = 9.42SWCNCTEE23 pKa = 4.0PRR25 pKa = 11.84NHH27 pKa = 6.6LPGWPTSEE35 pKa = 4.1GTSTEE40 pKa = 4.21DD41 pKa = 3.89GDD43 pKa = 4.53IITDD47 pKa = 3.68AEE49 pKa = 4.36MLTLAEE55 pKa = 4.35DD56 pKa = 4.12TEE58 pKa = 4.79GG59 pKa = 3.74

Molecular weight: 6.62 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>sp|Q91PQ2|ORF2_TTVD1 Uncharacterized ORF2 protein OS=Torque teno tupaia virus (isolate Tbc-TTV14) OX=766185 GN=ORF2 PE=4 SV=1
MM1 pKa = 7.8AYY3 pKa = 10.17FRR5 pKa = 11.84RR6 pKa = 11.84NFYY9 pKa = 10.19GGRR12 pKa = 11.84RR13 pKa = 11.84HH14 pKa = 5.81YY15 pKa = 10.39YY16 pKa = 9.29RR17 pKa = 11.84RR18 pKa = 11.84RR19 pKa = 11.84NAYY22 pKa = 5.75TRR24 pKa = 11.84RR25 pKa = 11.84RR26 pKa = 11.84YY27 pKa = 8.99RR28 pKa = 11.84RR29 pKa = 11.84VRR31 pKa = 11.84RR32 pKa = 11.84RR33 pKa = 11.84HH34 pKa = 5.42RR35 pKa = 11.84GRR37 pKa = 11.84RR38 pKa = 11.84FPYY41 pKa = 9.3FKK43 pKa = 9.85QGKK46 pKa = 8.15RR47 pKa = 11.84RR48 pKa = 11.84RR49 pKa = 11.84TRR51 pKa = 11.84LLHH54 pKa = 5.08VTDD57 pKa = 4.27PRR59 pKa = 11.84YY60 pKa = 9.69KK61 pKa = 10.0AHH63 pKa = 6.11CTITGWVPIAMTRR76 pKa = 11.84IQLISQPFTVDD87 pKa = 2.83TLSPFHH93 pKa = 6.91VYY95 pKa = 10.08PGGYY99 pKa = 9.63GYY101 pKa = 11.39GVFTLEE107 pKa = 4.6AMYY110 pKa = 10.43KK111 pKa = 8.03EE112 pKa = 4.4HH113 pKa = 7.0LMKK116 pKa = 10.58RR117 pKa = 11.84NRR119 pKa = 11.84WSRR122 pKa = 11.84SNAGFDD128 pKa = 3.15LGRR131 pKa = 11.84YY132 pKa = 8.78LGTWLTLVPHH142 pKa = 7.24PYY144 pKa = 10.03FSYY147 pKa = 10.79LFYY150 pKa = 11.04YY151 pKa = 10.38DD152 pKa = 4.16PEE154 pKa = 4.62YY155 pKa = 11.47GNTFEE160 pKa = 4.46FKK162 pKa = 10.74KK163 pKa = 10.37LIHH166 pKa = 5.88PAIMITHH173 pKa = 7.66PKK175 pKa = 8.94TILVLSNKK183 pKa = 10.03RR184 pKa = 11.84GGNRR188 pKa = 11.84RR189 pKa = 11.84KK190 pKa = 9.1WPRR193 pKa = 11.84MWIPRR198 pKa = 11.84PAIFADD204 pKa = 3.34GWEE207 pKa = 4.24FQKK210 pKa = 10.85DD211 pKa = 3.66LCQHH215 pKa = 5.86GLFAFGWAWVDD226 pKa = 4.76LDD228 pKa = 4.67RR229 pKa = 11.84PWMADD234 pKa = 2.53ISKK237 pKa = 9.23PAQTIDD243 pKa = 3.06PSTYY247 pKa = 10.48DD248 pKa = 4.11KK249 pKa = 11.33KK250 pKa = 11.1NDD252 pKa = 3.96MINKK256 pKa = 8.11VPNMWWKK263 pKa = 10.13EE264 pKa = 3.8AANDD268 pKa = 3.64WLTEE272 pKa = 3.7WGRR275 pKa = 11.84PQGSGVTQQFNQLAMAGPFVLKK297 pKa = 9.68TNKK300 pKa = 9.64SEE302 pKa = 4.21YY303 pKa = 11.02VNTEE307 pKa = 3.8LLQIILFYY315 pKa = 10.58KK316 pKa = 10.16SHH318 pKa = 5.83FQWGGEE324 pKa = 3.89FLQDD328 pKa = 4.64KK329 pKa = 10.45VLADD333 pKa = 3.65PTKK336 pKa = 10.45IPPAQTAYY344 pKa = 10.07YY345 pKa = 8.95QQAGQTNLYY354 pKa = 9.06GSPYY358 pKa = 9.79KK359 pKa = 10.11PLSSGLHH366 pKa = 6.19DD367 pKa = 5.63SISEE371 pKa = 4.11LPIASPPQNPHH382 pKa = 6.79KK383 pKa = 10.01YY384 pKa = 7.14TVRR387 pKa = 11.84PSDD390 pKa = 3.54YY391 pKa = 10.72DD392 pKa = 3.21KK393 pKa = 11.7DD394 pKa = 4.3GILTEE399 pKa = 4.06EE400 pKa = 4.24SFRR403 pKa = 11.84RR404 pKa = 11.84LTDD407 pKa = 3.09SPYY410 pKa = 10.32TSDD413 pKa = 3.57GGHH416 pKa = 6.03SFSSFSTASDD426 pKa = 3.63PLEE429 pKa = 4.31GTSRR433 pKa = 11.84YY434 pKa = 9.61ARR436 pKa = 11.84PLGRR440 pKa = 11.84KK441 pKa = 4.56TTRR444 pKa = 11.84EE445 pKa = 3.31PSRR448 pKa = 11.84RR449 pKa = 11.84RR450 pKa = 11.84KK451 pKa = 9.21RR452 pKa = 11.84RR453 pKa = 11.84RR454 pKa = 11.84RR455 pKa = 11.84SPSPEE460 pKa = 4.09DD461 pKa = 3.91EE462 pKa = 4.22EE463 pKa = 4.47TAPIPPKK470 pKa = 10.75SNSEE474 pKa = 3.9PSISGPGRR482 pKa = 11.84ATRR485 pKa = 11.84KK486 pKa = 9.44QLLQRR491 pKa = 11.84LFRR494 pKa = 11.84RR495 pKa = 11.84LLTSSPQQ502 pKa = 3.05

Molecular weight: 58.83 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3

0

3

775

59

502

258.3

29.85

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.935 ± 0.852

1.161 ± 0.908

5.677 ± 1.101

4.774 ± 1.211

3.613 ± 1.378

5.806 ± 1.079

3.484 ± 0.694

3.871 ± 0.454

5.032 ± 0.558

8.0 ± 0.429

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.194 ± 0.258

3.226 ± 0.18

8.387 ± 0.313

3.871 ± 0.708

9.161 ± 1.825

8.0 ± 0.84

8.258 ± 1.488

2.323 ± 0.698

2.968 ± 0.692

4.258 ± 1.54
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski