Tessaracoccus rhinocerotis

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Actinobacteria; Actinomycetia; Propionibacteriales; Propionibacteriaceae; Tessaracoccus

Average proteome isoelectric point is 5.94

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3082 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A553JZN4|A0A553JZN4_9ACTN ATP-binding protein OS=Tessaracoccus rhinocerotis OX=1689449 GN=FOJ82_11680 PE=4 SV=1
MM1 pKa = 7.24NRR3 pKa = 11.84RR4 pKa = 11.84LIAASAALASLALLVTGCGADD25 pKa = 3.58TEE27 pKa = 4.98APTDD31 pKa = 3.68TEE33 pKa = 4.44TTAGGTTAAEE43 pKa = 4.14TTPAGDD49 pKa = 3.52TGSTEE54 pKa = 4.26PKK56 pKa = 10.83GEE58 pKa = 3.97LTLAGWSLNTTPEE71 pKa = 4.04FQTLADD77 pKa = 4.46GFNATNPEE85 pKa = 4.04YY86 pKa = 9.93TVTVSEE92 pKa = 4.32YY93 pKa = 10.49QAGNDD98 pKa = 3.9YY99 pKa = 8.41DD100 pKa = 3.94TQMITDD106 pKa = 4.92LAAGTAPDD114 pKa = 4.46LYY116 pKa = 10.75IMKK119 pKa = 10.05NLVNFYY125 pKa = 9.75TYY127 pKa = 11.09AAGEE131 pKa = 4.08QLVDD135 pKa = 3.66VSDD138 pKa = 3.97VAGTLDD144 pKa = 3.69NEE146 pKa = 4.64SVSAYY151 pKa = 9.5EE152 pKa = 4.86LDD154 pKa = 3.48GATYY158 pKa = 9.71AIPYY162 pKa = 9.3RR163 pKa = 11.84QDD165 pKa = 2.41AWFLYY170 pKa = 10.07YY171 pKa = 10.83NIDD174 pKa = 3.56LFEE177 pKa = 4.1QAGVEE182 pKa = 4.32VPDD185 pKa = 6.1GSWTWDD191 pKa = 3.5DD192 pKa = 3.49YY193 pKa = 11.95AAAATEE199 pKa = 4.05LSEE202 pKa = 4.97KK203 pKa = 11.13LEE205 pKa = 4.33GDD207 pKa = 3.4TKK209 pKa = 10.97GAYY212 pKa = 4.97THH214 pKa = 6.43SWQSVIQGFANAQSEE229 pKa = 4.55GADD232 pKa = 3.67VLSGEE237 pKa = 4.25YY238 pKa = 10.45DD239 pKa = 3.24HH240 pKa = 7.04LKK242 pKa = 10.31PYY244 pKa = 9.64YY245 pKa = 10.01EE246 pKa = 5.21RR247 pKa = 11.84ALQMQADD254 pKa = 4.52GAMEE258 pKa = 4.72AYY260 pKa = 8.59GTVTTNSLSYY270 pKa = 10.33QSQFGTQKK278 pKa = 11.26AAMLPMGSWYY288 pKa = 9.95IATLVAQQASGEE300 pKa = 4.26AEE302 pKa = 3.89DD303 pKa = 4.59FAWGIAPAPQFDD315 pKa = 4.39EE316 pKa = 4.69STAGTDD322 pKa = 3.33NTPVTFGDD330 pKa = 3.58PTGIGINPAIEE341 pKa = 4.28DD342 pKa = 4.07EE343 pKa = 4.54KK344 pKa = 11.48LDD346 pKa = 3.64TAKK349 pKa = 11.1AFLSYY354 pKa = 10.44VASEE358 pKa = 4.39EE359 pKa = 4.28GAKK362 pKa = 10.39ALAGIGITPSVMSPEE377 pKa = 4.05VTDD380 pKa = 6.15LFFQLDD386 pKa = 4.86GIAEE390 pKa = 4.49DD391 pKa = 4.28EE392 pKa = 4.21LSRR395 pKa = 11.84WTFEE399 pKa = 3.76NRR401 pKa = 11.84TVMPEE406 pKa = 3.75NSVSQHH412 pKa = 4.06TAEE415 pKa = 4.35INTLLGEE422 pKa = 4.07LHH424 pKa = 6.5SAVLSDD430 pKa = 5.1SEE432 pKa = 5.05GIDD435 pKa = 3.32AAIEE439 pKa = 4.01NAEE442 pKa = 3.84NRR444 pKa = 11.84AKK446 pKa = 11.04NEE448 pKa = 3.56ILNRR452 pKa = 3.9

Molecular weight: 48.29 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A553JX90|A0A553JX90_9ACTN Nucleoside/nucleotide kinase family protein OS=Tessaracoccus rhinocerotis OX=1689449 GN=FOJ82_14640 PE=4 SV=1
MM1 pKa = 7.49VFQQGAAPARR11 pKa = 11.84GTPGQPFRR19 pKa = 11.84GSDD22 pKa = 2.95AGRR25 pKa = 11.84VSRR28 pKa = 11.84HH29 pKa = 3.98RR30 pKa = 11.84RR31 pKa = 11.84HH32 pKa = 6.26RR33 pKa = 11.84RR34 pKa = 11.84RR35 pKa = 11.84SHH37 pKa = 5.31HH38 pKa = 5.62RR39 pKa = 11.84RR40 pKa = 11.84HH41 pKa = 5.99RR42 pKa = 11.84VRR44 pKa = 11.84PSRR47 pKa = 11.84RR48 pKa = 11.84HH49 pKa = 4.34RR50 pKa = 11.84RR51 pKa = 11.84RR52 pKa = 11.84RR53 pKa = 11.84RR54 pKa = 11.84PARR57 pKa = 11.84AAAVGPAA64 pKa = 3.41

Molecular weight: 7.46 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3082

0

3082

1069584

24

2321

347.0

37.4

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

12.196 ± 0.056

0.661 ± 0.01

6.151 ± 0.035

6.207 ± 0.043

3.165 ± 0.027

9.056 ± 0.036

2.19 ± 0.021

3.978 ± 0.035

2.074 ± 0.028

10.119 ± 0.055

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.018 ± 0.02

2.3 ± 0.028

5.439 ± 0.033

3.01 ± 0.022

7.128 ± 0.05

5.535 ± 0.029

6.017 ± 0.037

9.091 ± 0.039

1.671 ± 0.023

1.993 ± 0.025
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski