Oleibacter marinus

Taxonomy: cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Oceanospirillaceae; Oleibacter

Average proteome isoelectric point is 5.74

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3470 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1N7N1X4|A0A1N7N1X4_9GAMM Predicted membrane protein OS=Oleibacter marinus OX=484498 GN=SAMN05421686_106113 PE=4 SV=1
MM1 pKa = 6.31TTSLFSRR8 pKa = 11.84ASLLAITVSLMACGGGSGGSSNNDD32 pKa = 3.23QSPDD36 pKa = 3.47SADD39 pKa = 3.31NSTDD43 pKa = 3.46NPSGGDD49 pKa = 3.44QNTDD53 pKa = 2.99NTDD56 pKa = 3.34TQIVLSDD63 pKa = 3.85TTWSAGNDD71 pKa = 3.6RR72 pKa = 11.84ILGMGFNGDD81 pKa = 3.81SEE83 pKa = 5.0SPEE86 pKa = 3.84LTIMKK91 pKa = 8.34GAPVSGQDD99 pKa = 3.18GDD101 pKa = 3.68IFSIRR106 pKa = 11.84SVTYY110 pKa = 9.23PSTEE114 pKa = 3.56LSEE117 pKa = 4.25IKK119 pKa = 10.75SIDD122 pKa = 3.47NQADD126 pKa = 3.49RR127 pKa = 11.84RR128 pKa = 11.84DD129 pKa = 3.93FQDD132 pKa = 3.05MDD134 pKa = 3.33IVSYY138 pKa = 11.13NDD140 pKa = 2.94EE141 pKa = 4.67SYY143 pKa = 11.56VVACQDD149 pKa = 3.39GSDD152 pKa = 3.78TPGYY156 pKa = 8.19TSAVSLHH163 pKa = 6.44IYY165 pKa = 7.77KK166 pKa = 10.26TSDD169 pKa = 2.82TSKK172 pKa = 10.31VAEE175 pKa = 4.28IDD177 pKa = 3.89LVDD180 pKa = 4.1GSVEE184 pKa = 3.7ARR186 pKa = 11.84EE187 pKa = 4.28CSGIAAEE194 pKa = 4.65FTQGTSDD201 pKa = 3.79DD202 pKa = 3.96MGAVVYY208 pKa = 9.79YY209 pKa = 10.3AGNAMTTSGSPQYY222 pKa = 10.71SYY224 pKa = 11.62SRR226 pKa = 11.84IMKK229 pKa = 9.89VEE231 pKa = 3.73LTIDD235 pKa = 3.09TTANVDD241 pKa = 3.11ATDD244 pKa = 3.87AVVLDD249 pKa = 5.29DD250 pKa = 3.5ISTVVRR256 pKa = 11.84ASQTEE261 pKa = 4.04DD262 pKa = 3.02FMSGVTGFGDD272 pKa = 3.41HH273 pKa = 6.82VYY275 pKa = 8.94YY276 pKa = 10.32TYY278 pKa = 11.5YY279 pKa = 10.81DD280 pKa = 3.89DD281 pKa = 6.13SEE283 pKa = 4.33EE284 pKa = 4.45TNNLMYY290 pKa = 10.67ANSGSSPATIRR301 pKa = 11.84NVDD304 pKa = 3.09WSANDD309 pKa = 3.68PFVTGVAQQMLVKK322 pKa = 10.65DD323 pKa = 3.63MFVIPGQQATDD334 pKa = 3.57FDD336 pKa = 5.03SIYY339 pKa = 10.07MVSDD343 pKa = 3.9SAASGIVVAGYY354 pKa = 10.14RR355 pKa = 11.84RR356 pKa = 11.84DD357 pKa = 3.69MNLKK361 pKa = 9.65QAMTLSSDD369 pKa = 3.57TSVQNCSDD377 pKa = 4.39VITGISDD384 pKa = 3.09QGVGQKK390 pKa = 9.53LWCHH394 pKa = 6.64DD395 pKa = 3.56ATDD398 pKa = 3.6SGNIIEE404 pKa = 5.02VYY406 pKa = 10.77SPVHH410 pKa = 6.2PGNN413 pKa = 3.48

Molecular weight: 43.94 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1N7Q192|A0A1N7Q192_9GAMM Uncharacterized protein OS=Oleibacter marinus OX=484498 GN=SAMN05421686_11290 PE=4 SV=1
MM1 pKa = 7.65DD2 pKa = 4.08TQRR5 pKa = 11.84LMALEE10 pKa = 4.53GSWLEE15 pKa = 3.85EE16 pKa = 3.83RR17 pKa = 11.84VSHH20 pKa = 6.49LRR22 pKa = 11.84GRR24 pKa = 11.84HH25 pKa = 5.08LLYY28 pKa = 10.88AGVDD32 pKa = 3.61TDD34 pKa = 4.01PKK36 pKa = 10.44FLGRR40 pKa = 11.84SRR42 pKa = 11.84ADD44 pKa = 2.91HH45 pKa = 5.93TFRR48 pKa = 11.84VGLPWQKK55 pKa = 11.3GLVDD59 pKa = 4.2CQAQIDD65 pKa = 3.94NTRR68 pKa = 11.84WPFPDD73 pKa = 3.08EE74 pKa = 4.07TLDD77 pKa = 4.0VVVLQHH83 pKa = 6.7ALDD86 pKa = 3.84MTSRR90 pKa = 11.84PHH92 pKa = 5.66QLVRR96 pKa = 11.84EE97 pKa = 4.44ATRR100 pKa = 11.84SLVSGGYY107 pKa = 9.87LVVVGFNPYY116 pKa = 8.36STWGGVRR123 pKa = 11.84WLRR126 pKa = 11.84TMSTEE131 pKa = 4.33LPWVSNPVAPLRR143 pKa = 11.84LSDD146 pKa = 3.51WLMLLDD152 pKa = 4.61FRR154 pKa = 11.84VEE156 pKa = 4.42NITTAAHH163 pKa = 6.6LWPVKK168 pKa = 10.1IGSEE172 pKa = 3.96AMSRR176 pKa = 11.84RR177 pKa = 11.84VDD179 pKa = 3.25RR180 pKa = 11.84VLAGNRR186 pKa = 11.84MVAGNIYY193 pKa = 10.56LLVARR198 pKa = 11.84KK199 pKa = 7.18TVAGMTTIRR208 pKa = 11.84SGRR211 pKa = 11.84KK212 pKa = 6.98VRR214 pKa = 11.84RR215 pKa = 11.84EE216 pKa = 3.9PKK218 pKa = 10.22LGFAIPTTRR227 pKa = 11.84KK228 pKa = 8.16PVSRR232 pKa = 11.84IKK234 pKa = 11.02GSLL237 pKa = 3.22

Molecular weight: 26.82 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3470

0

3470

1171308

27

5033

337.6

37.27

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

9.425 ± 0.053

0.932 ± 0.016

6.417 ± 0.079

6.788 ± 0.046

3.748 ± 0.028

7.299 ± 0.042

2.082 ± 0.022

5.593 ± 0.029

4.092 ± 0.046

10.136 ± 0.054

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.545 ± 0.024

3.752 ± 0.043

4.239 ± 0.034

3.968 ± 0.029

5.538 ± 0.047

6.729 ± 0.038

5.534 ± 0.06

7.021 ± 0.04

1.302 ± 0.017

2.863 ± 0.027
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski