Odonata-associated circular virus-10

Taxonomy: Viruses; unclassified viruses; unclassified DNA viruses; unclassified ssDNA viruses

Average proteome isoelectric point is 8.49

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0B4UI33|A0A0B4UI33_9VIRU Putative capsid protein OS=Odonata-associated circular virus-10 OX=1592110 PE=4 SV=1
MM1 pKa = 7.55LFGVCFTFNNWSAEE15 pKa = 4.21TKK17 pKa = 10.06KK18 pKa = 10.7ACQKK22 pKa = 10.97AIGQAGILYY31 pKa = 8.95IIWGEE36 pKa = 3.99EE37 pKa = 3.74VGEE40 pKa = 4.31EE41 pKa = 4.39GTPHH45 pKa = 5.67LQGYY49 pKa = 6.92IQCNQDD55 pKa = 2.4KK56 pKa = 9.86YY57 pKa = 10.26KK58 pKa = 11.04RR59 pKa = 11.84LMRR62 pKa = 11.84VIGTCHH68 pKa = 5.78MEE70 pKa = 4.12KK71 pKa = 10.43QKK73 pKa = 9.85GTSDD77 pKa = 3.5EE78 pKa = 3.99ARR80 pKa = 11.84DD81 pKa = 3.69YY82 pKa = 11.17CKK84 pKa = 10.44KK85 pKa = 10.67DD86 pKa = 3.98GIWQEE91 pKa = 3.47HH92 pKa = 6.76GIYY95 pKa = 10.46KK96 pKa = 10.62FIDD99 pKa = 3.71APKK102 pKa = 9.26KK103 pKa = 9.46RR104 pKa = 11.84QGEE107 pKa = 4.1RR108 pKa = 11.84SDD110 pKa = 4.61LILVKK115 pKa = 10.67KK116 pKa = 10.76SIDD119 pKa = 3.23EE120 pKa = 4.26GMSYY124 pKa = 11.55DD125 pKa = 5.28DD126 pKa = 3.28ICEE129 pKa = 3.8KK130 pKa = 10.8HH131 pKa = 5.48FAIVGKK137 pKa = 8.17YY138 pKa = 9.17SRR140 pKa = 11.84FIKK143 pKa = 10.37EE144 pKa = 3.53RR145 pKa = 11.84VQARR149 pKa = 11.84DD150 pKa = 3.02SKK152 pKa = 8.92TQEE155 pKa = 3.98TEE157 pKa = 3.81LQEE160 pKa = 4.12QFVNSSLRR168 pKa = 11.84PWQQKK173 pKa = 10.44LLDD176 pKa = 3.59ITATEE181 pKa = 3.98ACPRR185 pKa = 11.84KK186 pKa = 9.62IHH188 pKa = 6.66WIWEE192 pKa = 4.09DD193 pKa = 2.96KK194 pKa = 11.42GNVGKK199 pKa = 10.87SFMTTYY205 pKa = 10.54LGVMKK210 pKa = 10.61GSALLTAGKK219 pKa = 9.31KK220 pKa = 10.41ADD222 pKa = 3.38MAYY225 pKa = 9.56IYY227 pKa = 10.08AQKK230 pKa = 9.89PSKK233 pKa = 10.19IVCFDD238 pKa = 4.19LARR241 pKa = 11.84TNEE244 pKa = 3.94EE245 pKa = 4.17YY246 pKa = 11.19LDD248 pKa = 3.96GVYY251 pKa = 10.81SLAEE255 pKa = 3.9DD256 pKa = 4.11LKK258 pKa = 10.22NGRR261 pKa = 11.84VVSTKK266 pKa = 10.49YY267 pKa = 9.8EE268 pKa = 4.14SKK270 pKa = 9.47TAFFKK275 pKa = 10.58PPHH278 pKa = 6.01VFVFANFLPNMKK290 pKa = 9.49KK291 pKa = 9.37WSAYY295 pKa = 9.24RR296 pKa = 11.84YY297 pKa = 10.36NIIDD301 pKa = 4.25LNRR304 pKa = 11.84PLIKK308 pKa = 10.59LPILPIVLCIDD319 pKa = 4.16CARR322 pKa = 11.84CDD324 pKa = 3.78VVCIQSTIQVRR335 pKa = 11.84PDD337 pKa = 3.15YY338 pKa = 9.73PHH340 pKa = 6.2NHH342 pKa = 6.79RR343 pKa = 11.84IVYY346 pKa = 9.59

Molecular weight: 39.92 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0B4UI33|A0A0B4UI33_9VIRU Putative capsid protein OS=Odonata-associated circular virus-10 OX=1592110 PE=4 SV=1
MM1 pKa = 7.66INRR4 pKa = 11.84AVMKK8 pKa = 10.55KK9 pKa = 10.16SEE11 pKa = 4.34TKK13 pKa = 10.54NLVASSEE20 pKa = 4.17NIQLYY25 pKa = 9.54HH26 pKa = 6.67NNGAVSGAGGSTAAVIFNPWDD47 pKa = 4.35AIGQGLTVRR56 pKa = 11.84NRR58 pKa = 11.84IGNEE62 pKa = 3.21IYY64 pKa = 10.0PRR66 pKa = 11.84GMAVRR71 pKa = 11.84MEE73 pKa = 4.74LSNKK77 pKa = 9.56LDD79 pKa = 3.81RR80 pKa = 11.84PNLTYY85 pKa = 10.54RR86 pKa = 11.84IIVAVIPKK94 pKa = 9.5YY95 pKa = 10.8YY96 pKa = 10.76NNTVSSAAFDD106 pKa = 3.9PRR108 pKa = 11.84DD109 pKa = 3.77NNASMNWMISWWKK122 pKa = 8.79QDD124 pKa = 3.11SGIKK128 pKa = 9.73ILYY131 pKa = 8.85DD132 pKa = 3.37KK133 pKa = 10.66SARR136 pKa = 11.84AQLGFYY142 pKa = 9.99AVPSADD148 pKa = 3.27GDD150 pKa = 3.81QDD152 pKa = 3.4GKK154 pKa = 10.76EE155 pKa = 3.73ASKK158 pKa = 10.91VVKK161 pKa = 10.33LYY163 pKa = 10.11IKK165 pKa = 10.12SRR167 pKa = 11.84RR168 pKa = 11.84GQKK171 pKa = 10.51LMWGQDD177 pKa = 3.12QRR179 pKa = 11.84LVNNPMIMWVIRR191 pKa = 11.84SDD193 pKa = 4.43LYY195 pKa = 10.95GTLNTDD201 pKa = 3.08NVASCAINTKK211 pKa = 10.25HH212 pKa = 5.3YY213 pKa = 9.97WKK215 pKa = 10.64DD216 pKa = 3.06RR217 pKa = 3.72

Molecular weight: 24.45 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

563

217

346

281.5

32.19

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.105 ± 1.006

2.309 ± 1.126

5.861 ± 0.079

4.618 ± 1.41

3.02 ± 0.997

6.394 ± 0.316

1.776 ± 0.521

7.815 ± 0.269

8.703 ± 1.091

6.394 ± 0.246

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

3.02 ± 0.687

5.684 ± 2.152

3.552 ± 0.199

4.44 ± 0.459

5.506 ± 0.576

6.039 ± 1.094

4.263 ± 0.351

6.217 ± 0.424

2.487 ± 0.45

4.796 ± 0.114
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski