Morus notabilis

Taxonomy: cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliopsida; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus

Average proteome isoelectric point is 6.9

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 26760 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|W9RVP0|W9RVP0_9ROSA Zinc finger A20 and AN1 domain-containing stress-associated protein 5 OS=Morus notabilis OX=981085 GN=L484_008234 PE=4 SV=1
MM1 pKa = 7.5ASVATSEE8 pKa = 4.01KK9 pKa = 10.58CVFIDD14 pKa = 4.53GDD16 pKa = 4.03DD17 pKa = 3.64GFEE20 pKa = 4.46AVDD23 pKa = 3.28IDD25 pKa = 4.38SAFLMSLMEE34 pKa = 4.31EE35 pKa = 3.91LHH37 pKa = 6.63DD38 pKa = 3.75QVEE41 pKa = 4.68VTDD44 pKa = 3.87EE45 pKa = 4.02EE46 pKa = 4.37RR47 pKa = 11.84LKK49 pKa = 11.2SVIQSLEE56 pKa = 3.79AEE58 pKa = 4.69INSSTAVDD66 pKa = 4.4LDD68 pKa = 3.53HH69 pKa = 7.67DD70 pKa = 5.14SIYY73 pKa = 10.8MMEE76 pKa = 4.93PDD78 pKa = 4.11HH79 pKa = 7.19DD80 pKa = 4.57RR81 pKa = 11.84SISDD85 pKa = 3.8RR86 pKa = 11.84EE87 pKa = 4.0DD88 pKa = 3.23SQACSLGPMDD98 pKa = 5.38DD99 pKa = 3.5QDD101 pKa = 4.25FSVSFDD107 pKa = 3.75DD108 pKa = 5.79LDD110 pKa = 3.81MNRR113 pKa = 11.84LINMEE118 pKa = 4.69AVPCSPNHH126 pKa = 5.6WDD128 pKa = 3.64MYY130 pKa = 10.75PFGDD134 pKa = 3.99HH135 pKa = 7.38DD136 pKa = 4.66QITSNDD142 pKa = 3.17YY143 pKa = 10.8SADD146 pKa = 3.05HH147 pKa = 5.6FTYY150 pKa = 10.74NRR152 pKa = 11.84GVVLDD157 pKa = 3.44QVYY160 pKa = 10.36GYY162 pKa = 11.16NSLWQEE168 pKa = 4.13TTHH171 pKa = 7.02DD172 pKa = 3.7SVMYY176 pKa = 9.74EE177 pKa = 3.79

Molecular weight: 20.15 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|W9R0B7|W9R0B7_9ROSA Tyrosyl-DNA phosphodiesterase 1 OS=Morus notabilis OX=981085 GN=L484_014813 PE=3 SV=1
MM1 pKa = 7.49AAAISAPQKK10 pKa = 10.66LRR12 pKa = 11.84IANHH16 pKa = 5.67QPLLPNLSFSSHH28 pKa = 3.57TRR30 pKa = 11.84LRR32 pKa = 11.84RR33 pKa = 11.84KK34 pKa = 9.88SKK36 pKa = 10.59LGPAPKK42 pKa = 9.77RR43 pKa = 11.84WISAQGKK50 pKa = 8.66KK51 pKa = 9.59RR52 pKa = 11.84EE53 pKa = 3.9RR54 pKa = 11.84RR55 pKa = 11.84IKK57 pKa = 10.68NVAKK61 pKa = 10.27PLL63 pKa = 3.78

Molecular weight: 7.12 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

26760

0

26760

9697202

50

5097

362.4

40.43

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.834 ± 0.014

1.835 ± 0.008

5.296 ± 0.012

6.538 ± 0.016

4.246 ± 0.011

6.602 ± 0.016

2.381 ± 0.008

5.179 ± 0.011

6.046 ± 0.015

9.683 ± 0.022

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.328 ± 0.006

4.412 ± 0.01

4.934 ± 0.017

3.553 ± 0.011

5.622 ± 0.013

9.07 ± 0.02

4.852 ± 0.01

6.586 ± 0.011

1.299 ± 0.005

2.704 ± 0.007
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski