Muricauda sp. ES.050

Taxonomy: cellular organisms; Bacteria; FCB group; Bacteroidetes/Chlorobi group; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Muricauda; unclassified Muricauda

Average proteome isoelectric point is 6.26

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3184 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A2N0GM34|A0A2N0GM34_9FLAO Uncharacterized protein OS=Muricauda sp. ES.050 OX=1798204 GN=AXZ78_3106 PE=4 SV=1
MM1 pKa = 7.66KK2 pKa = 10.46KK3 pKa = 10.01NLPLKK8 pKa = 10.25FSSFLFIFLSIMACSTEE25 pKa = 4.42DD26 pKa = 3.28GTNGLDD32 pKa = 4.09GMDD35 pKa = 5.29GIDD38 pKa = 4.9GLDD41 pKa = 3.77GSDD44 pKa = 4.72GSDD47 pKa = 3.13GLNSLVSTATEE58 pKa = 4.1EE59 pKa = 4.63PGGNCANGGFRR70 pKa = 11.84LDD72 pKa = 4.5FGLDD76 pKa = 3.19SDD78 pKa = 4.78NNGILDD84 pKa = 4.29DD85 pKa = 4.5NEE87 pKa = 4.3VTASQYY93 pKa = 10.82LCNVGPSEE101 pKa = 4.44GLTSLISTVIEE112 pKa = 4.06QPGDD116 pKa = 3.06NCANGGYY123 pKa = 10.03RR124 pKa = 11.84LDD126 pKa = 3.75VGLDD130 pKa = 3.39NNSNGTLDD138 pKa = 3.49VDD140 pKa = 3.92EE141 pKa = 5.36VSTSEE146 pKa = 4.2YY147 pKa = 10.23VCNGDD152 pKa = 4.19SSDD155 pKa = 4.81FSYY158 pKa = 11.11QSYY161 pKa = 11.29ASLISQTGTDD171 pKa = 4.39DD172 pKa = 3.24PTEE175 pKa = 4.0QVLEE179 pKa = 4.03NSLNLNISWARR190 pKa = 11.84QSQGIYY196 pKa = 10.38LGTLDD201 pKa = 3.68TTIDD205 pKa = 3.07ISKK208 pKa = 8.87TVIFFSTPTTHH219 pKa = 5.93TGVRR223 pKa = 11.84GTLEE227 pKa = 3.81SGNQIRR233 pKa = 11.84LEE235 pKa = 4.02LQNGINEE242 pKa = 4.16FADD245 pKa = 3.38NFEE248 pKa = 4.29NLSFEE253 pKa = 4.0LRR255 pKa = 11.84EE256 pKa = 4.1YY257 pKa = 10.48EE258 pKa = 4.07

Molecular weight: 27.64 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A2N0GFJ4|A0A2N0GFJ4_9FLAO Uncharacterized protein DUF4270 OS=Muricauda sp. ES.050 OX=1798204 GN=AXZ78_0766 PE=4 SV=1
MM1 pKa = 7.84PSGKK5 pKa = 9.32KK6 pKa = 9.59RR7 pKa = 11.84KK8 pKa = 7.05RR9 pKa = 11.84HH10 pKa = 5.11KK11 pKa = 10.59VATHH15 pKa = 5.21KK16 pKa = 10.3RR17 pKa = 11.84KK18 pKa = 9.62KK19 pKa = 9.04RR20 pKa = 11.84RR21 pKa = 11.84RR22 pKa = 11.84ANRR25 pKa = 11.84HH26 pKa = 4.5KK27 pKa = 10.78KK28 pKa = 9.37KK29 pKa = 10.83

Molecular weight: 3.63 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3184

0

3184

1083582

29

4729

340.3

38.31

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.496 ± 0.049

0.718 ± 0.015

5.89 ± 0.05

6.985 ± 0.042

5.072 ± 0.037

6.895 ± 0.049

1.835 ± 0.022

7.264 ± 0.04

7.339 ± 0.073

9.29 ± 0.061

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.456 ± 0.023

5.614 ± 0.04

3.62 ± 0.025

3.439 ± 0.024

3.608 ± 0.032

6.309 ± 0.03

5.63 ± 0.065

6.487 ± 0.033

1.109 ± 0.018

3.944 ± 0.03
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski