Clostridium taeniosporum

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Firmicutes; Clostridia; Eubacteriales; Clostridiaceae; Clostridium

Average proteome isoelectric point is 6.59

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2948 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1D7XJ94|A0A1D7XJ94_9CLOT NAD-dependent dehydratase OS=Clostridium taeniosporum OX=394958 GN=BGI42_06490 PE=4 SV=1
MM1 pKa = 7.68PSILRR6 pKa = 11.84YY7 pKa = 8.58STTARR12 pKa = 11.84GSMVITGNTLGLLGKK27 pKa = 9.53FNPPDD32 pKa = 3.61ATDD35 pKa = 3.33TDD37 pKa = 4.14VNANGIGAFISLNNGISAPGGYY59 pKa = 9.44PLGTTFDD66 pKa = 3.37WRR68 pKa = 11.84EE69 pKa = 3.87NGSDD73 pKa = 4.11AIIDD77 pKa = 3.63IPVSAKK83 pKa = 9.84ILYY86 pKa = 10.41AEE88 pKa = 4.78LSWSGSYY95 pKa = 11.01LNADD99 pKa = 3.21QDD101 pKa = 3.8VSAFLDD107 pKa = 3.41NAITFNTPLGSFQVNPDD124 pKa = 3.12AATAGSVVFPTNGVGQYY141 pKa = 9.62FRR143 pKa = 11.84SANVTTLVNSGTGTYY158 pKa = 9.77SVQSIPGVLGGTPSNPAVEE177 pKa = 4.18NNYY180 pKa = 10.36LGWSLEE186 pKa = 3.74IAYY189 pKa = 10.05EE190 pKa = 4.31DD191 pKa = 3.18VTLPYY196 pKa = 10.94RR197 pKa = 11.84NMNVWTIFDD206 pKa = 4.38PVDD209 pKa = 3.56LAISPIVDD217 pKa = 3.2IPVSGFSTPISGSIKK232 pKa = 10.36ARR234 pKa = 11.84LLISAGEE241 pKa = 4.22GDD243 pKa = 3.96PQVTGDD249 pKa = 3.65QVLFGPDD256 pKa = 2.77IVGLVALQGEE266 pKa = 4.86PPSPPNNPVDD276 pKa = 3.42NFFVSRR282 pKa = 11.84INDD285 pKa = 3.64GNSEE289 pKa = 4.43SLTVGQVDD297 pKa = 3.78TLGSFGTLNQPVPTTLAGRR316 pKa = 11.84LAPGRR321 pKa = 11.84YY322 pKa = 9.76GYY324 pKa = 10.68DD325 pKa = 2.81ITNVDD330 pKa = 3.56ASTTLVNSQTNALIRR345 pKa = 11.84LTTSGDD351 pKa = 3.6GYY353 pKa = 11.43VPNLLGLQIDD363 pKa = 4.25SNSPIISINKK373 pKa = 8.57SAPATATRR381 pKa = 11.84GSDD384 pKa = 2.66ITYY387 pKa = 9.23TLTVTNTGVIQADD400 pKa = 4.11TVTVLDD406 pKa = 4.42PAPTGTTVNPGSVTVQNATGPVVNNSTAATLNVDD440 pKa = 4.58IGPLLPNQVVTIQYY454 pKa = 7.68TVSTTGTTPTPVLNSTTANYY474 pKa = 9.36TFVPIPGGNVITDD487 pKa = 3.76TSNSNEE493 pKa = 4.4TITAIANKK501 pKa = 9.0FVCEE505 pKa = 3.89PFGYY509 pKa = 9.64RR510 pKa = 11.84VAAEE514 pKa = 4.14STGTNSTLLKK524 pKa = 10.48LNLVTGEE531 pKa = 4.12VDD533 pKa = 3.94VLNPDD538 pKa = 2.53IGMNINAIGYY548 pKa = 8.52NVLDD552 pKa = 3.58NLIYY556 pKa = 10.49GIEE559 pKa = 4.05NTTTNLVILDD569 pKa = 3.93STGTTSVLGPVPNLPLLPSPFYY591 pKa = 10.26NTGTIDD597 pKa = 3.92NNGHH601 pKa = 7.2LYY603 pKa = 10.08IKK605 pKa = 10.67SSTDD609 pKa = 3.01PNYY612 pKa = 10.93YY613 pKa = 10.29VVDD616 pKa = 4.23VNSSSPTFGQLVDD629 pKa = 3.99PLNGFVLDD637 pKa = 3.96TAPYY641 pKa = 7.3GTPINPNMLVADD653 pKa = 3.96WTVSSVDD660 pKa = 3.13GNLYY664 pKa = 10.48GVEE667 pKa = 4.08NTSGNVVSLNPLTGVVTVLTTSGIPIGAYY696 pKa = 9.17GAVYY700 pKa = 10.22SINDD704 pKa = 3.27QYY706 pKa = 11.59IYY708 pKa = 10.36ATNNTTGVIYY718 pKa = 10.41RR719 pKa = 11.84IEE721 pKa = 4.15INGDD725 pKa = 3.03NATGIVFSSDD735 pKa = 3.12VPSNNNDD742 pKa = 2.87GAACLNAEE750 pKa = 4.36LLIDD754 pKa = 5.3FGDD757 pKa = 4.52APDD760 pKa = 4.11PTPGNGPNDD769 pKa = 3.85YY770 pKa = 9.78STLLANNGPRR780 pKa = 11.84HH781 pKa = 5.55QIINQLYY788 pKa = 10.34LGTQVTAEE796 pKa = 3.76NDD798 pKa = 2.99AYY800 pKa = 11.07ANITSDD806 pKa = 3.13ATGDD810 pKa = 4.45DD811 pKa = 4.51IIQGIQDD818 pKa = 4.21DD819 pKa = 4.71GLVVPLTPMLSTDD832 pKa = 2.86TTYY835 pKa = 11.88ALNVSVTNNTGLPANLYY852 pKa = 9.92GWIDD856 pKa = 3.78FNEE859 pKa = 4.33DD860 pKa = 3.77GIFQGNEE867 pKa = 3.41AAPVQIVPSALGLQQFILNFIVPVGVVLQPDD898 pKa = 3.52HH899 pKa = 6.1TFVRR903 pKa = 11.84LRR905 pKa = 11.84LTTDD909 pKa = 3.36DD910 pKa = 5.96LINQNSLPIDD920 pKa = 3.77EE921 pKa = 5.05DD922 pKa = 3.79TRR924 pKa = 11.84SIGPASDD931 pKa = 4.48GEE933 pKa = 4.37VEE935 pKa = 5.3DD936 pKa = 4.9YY937 pKa = 11.06YY938 pKa = 11.37LTITPVADD946 pKa = 2.95ISVVKK951 pKa = 9.79TGAPNPVVVGNTLTYY966 pKa = 10.48TMVVSNLGPSDD977 pKa = 3.77AQSVSLTDD985 pKa = 4.01AVPACILNPVYY996 pKa = 10.52SVNGGTSNPWPVGGINLGTIASGATPITVTISGTVDD1032 pKa = 3.61PACTEE1037 pKa = 3.91SSLVNTATVSSPTPDD1052 pKa = 4.27PDD1054 pKa = 3.74PSNNTSTVTTQVNQSADD1071 pKa = 3.0IKK1073 pKa = 9.93VVKK1076 pKa = 8.71TASPSPVVAGQTLTYY1091 pKa = 10.07TMVVSNLGPSDD1102 pKa = 3.77AQSVSLTDD1110 pKa = 4.01AVPACILNPVYY1121 pKa = 10.54SVNGGASNPWPVGGINLGTIAVGATPITVTISGTVDD1157 pKa = 3.52PACAEE1162 pKa = 4.02SSLVNTAIVSSPTPDD1177 pKa = 4.24PDD1179 pKa = 3.74PSNNTSTVTTQVNQSADD1196 pKa = 2.96ISVVKK1201 pKa = 9.65TGSSNPVVAGNILTYY1216 pKa = 10.79TMVVSNLGPSDD1227 pKa = 3.77AQSVSLTDD1235 pKa = 4.01AVPACILNPVYY1246 pKa = 10.52SVNGGTSNPWPVGGINLGTIASGATPITVTISGTVDD1282 pKa = 3.61PACTEE1287 pKa = 3.91SSLVNTATVSSPTPDD1302 pKa = 4.2LDD1304 pKa = 4.15PNNNTSTVTTTVNTLADD1321 pKa = 3.52VSVVKK1326 pKa = 9.09TANPINVNRR1335 pKa = 11.84GDD1337 pKa = 3.66VVTYY1341 pKa = 8.51TIVVSNAGPSDD1352 pKa = 3.7AQSVSLADD1360 pKa = 3.64VVPSEE1365 pKa = 4.15LLNPEE1370 pKa = 4.06FSINNGVSWNIWSNPYY1386 pKa = 10.65SIGTLTAGTSKK1397 pKa = 9.98TIFIRR1402 pKa = 11.84GTISNTAIGTVNNTATVSSSTPDD1425 pKa = 3.61PNPDD1429 pKa = 3.44NNTSSASIEE1438 pKa = 4.04VNYY1441 pKa = 10.79ADD1443 pKa = 5.44LVAPGNFVKK1452 pKa = 10.71AVDD1455 pKa = 3.87KK1456 pKa = 10.97QYY1458 pKa = 11.84ADD1460 pKa = 3.23IGDD1463 pKa = 4.53EE1464 pKa = 3.59ITYY1467 pKa = 8.5TINVTNTGNTIANNVVITDD1486 pKa = 5.09PIPNGTSYY1494 pKa = 11.63VSGSLIASAPVTGTPAGGINVTNGIAPGATLTLSYY1529 pKa = 9.89KK1530 pKa = 10.5VKK1532 pKa = 10.12VIQMPVPNPIPNTASISYY1550 pKa = 8.94TYY1552 pKa = 10.36TVDD1555 pKa = 3.47PNNPNGASGSGDD1567 pKa = 3.34TNTVFTQVNHH1577 pKa = 6.77GEE1579 pKa = 4.18ILPEE1583 pKa = 4.06NAVKK1587 pKa = 9.41TVDD1590 pKa = 3.95TNPTTPGDD1598 pKa = 3.77IITYY1602 pKa = 7.38TVSIKK1607 pKa = 9.66NTGNVPVDD1615 pKa = 3.5ALVTDD1620 pKa = 4.22VVPTGTQFVTGTVIINGVSKK1640 pKa = 9.96PAKK1643 pKa = 9.84NPNFGIKK1650 pKa = 9.86IIGIPAGEE1658 pKa = 3.96IANLSFKK1665 pKa = 11.21VKK1667 pKa = 10.63VLDD1670 pKa = 3.97NAPSTLINNAKK1681 pKa = 9.86INYY1684 pKa = 9.22SYY1686 pKa = 11.47VVDD1689 pKa = 3.9PALPPVNKK1697 pKa = 10.15DD1698 pKa = 3.04VTTNTVNVTVLKK1710 pKa = 10.87PEE1712 pKa = 3.96LTLVKK1717 pKa = 10.56SADD1720 pKa = 3.57RR1721 pKa = 11.84TGAVVGDD1728 pKa = 4.05IIRR1731 pKa = 11.84YY1732 pKa = 9.84SITATNTGEE1741 pKa = 4.17IPLQNVIVKK1750 pKa = 10.36DD1751 pKa = 3.6VLAPEE1756 pKa = 4.56LSYY1759 pKa = 10.95IGNLTINGVPSGQSILTGVNIEE1781 pKa = 4.48DD1782 pKa = 3.9LSIGEE1787 pKa = 4.35VKK1789 pKa = 10.08TISFDD1794 pKa = 3.55AKK1796 pKa = 10.82VNAIPADD1803 pKa = 3.5KK1804 pKa = 10.23TINNTSTATFNYY1816 pKa = 9.27IVSGKK1821 pKa = 9.47NFSGNATSNEE1831 pKa = 3.79EE1832 pKa = 4.19TIRR1835 pKa = 11.84VYY1837 pKa = 10.97NPEE1840 pKa = 3.61LTMTKK1845 pKa = 9.55MSNNPIVKK1853 pKa = 10.3VGDD1856 pKa = 3.53TFQYY1860 pKa = 10.68TITAEE1865 pKa = 4.04NTGDD1869 pKa = 3.68IIINDD1874 pKa = 4.17VIVKK1878 pKa = 10.39DD1879 pKa = 3.86DD1880 pKa = 4.39LPPEE1884 pKa = 4.16FEE1886 pKa = 4.26VVQIIVNGDD1895 pKa = 3.58VVNGDD1900 pKa = 3.11IEE1902 pKa = 4.48AGINIGNLAIGEE1914 pKa = 4.4SVDD1917 pKa = 3.25IVLTIQVLADD1927 pKa = 3.61LTDD1930 pKa = 3.77TFQNIATGTGTSITDD1945 pKa = 3.62PNKK1948 pKa = 10.11PPVIVEE1954 pKa = 4.41GEE1956 pKa = 4.34GEE1958 pKa = 4.18DD1959 pKa = 4.22PGVTVYY1965 pKa = 10.77NPKK1968 pKa = 10.64LEE1970 pKa = 4.31LEE1972 pKa = 4.29KK1973 pKa = 11.09SVDD1976 pKa = 3.29KK1977 pKa = 10.74PYY1979 pKa = 11.05VIVGDD1984 pKa = 3.9TVTYY1988 pKa = 9.41TVVAKK1993 pKa = 9.29NTGDD1997 pKa = 3.25IVLGNVDD2004 pKa = 5.07LDD2006 pKa = 4.36PIVIYY2011 pKa = 10.75DD2012 pKa = 4.02LLGPSLEE2019 pKa = 4.25FVSGSVTIDD2028 pKa = 4.27GISDD2032 pKa = 3.87PLSGIVNGVILGVLNVGEE2050 pKa = 4.53SKK2052 pKa = 9.78TVTFKK2057 pKa = 11.47AKK2059 pKa = 10.3VLSNDD2064 pKa = 2.65ISPIEE2069 pKa = 4.1NTAQATFGYY2078 pKa = 9.31QIPGDD2083 pKa = 3.84EE2084 pKa = 4.74PEE2086 pKa = 4.59TGNATSNTVQVIPEE2100 pKa = 3.97IANLEE2105 pKa = 4.06ILKK2108 pKa = 10.49EE2109 pKa = 3.92ADD2111 pKa = 3.22TNFAVMNDD2119 pKa = 3.64VINYY2123 pKa = 7.03TVTVTNTGTLDD2134 pKa = 3.4ANNVIFTDD2142 pKa = 3.68EE2143 pKa = 4.57LPPEE2147 pKa = 4.24VEE2149 pKa = 5.19LIDD2152 pKa = 4.79GSFKK2156 pKa = 10.95VDD2158 pKa = 4.21GIGINNVDD2166 pKa = 3.65LRR2168 pKa = 11.84QGVNIGTIKK2177 pKa = 9.94TGEE2180 pKa = 3.95EE2181 pKa = 3.89AIIEE2185 pKa = 4.21YY2186 pKa = 9.27SVKK2189 pKa = 10.63VIATNCEE2196 pKa = 3.97LKK2198 pKa = 10.53IKK2200 pKa = 10.57NSAIAKK2206 pKa = 7.4FQYY2209 pKa = 10.26RR2210 pKa = 11.84LPNGTTGTVTTDD2222 pKa = 3.21PSEE2225 pKa = 4.1TSTVIVNLGISNFKK2239 pKa = 10.51QLFIEE2244 pKa = 4.42EE2245 pKa = 4.2NLIIPDD2251 pKa = 4.01EE2252 pKa = 4.64KK2253 pKa = 11.03PDD2255 pKa = 3.37IEE2257 pKa = 5.26EE2258 pKa = 3.99INEE2261 pKa = 3.84VNGDD2265 pKa = 3.55VEE2267 pKa = 4.59IIKK2270 pKa = 10.12HH2271 pKa = 4.96YY2272 pKa = 10.71VVEE2275 pKa = 4.33TPILKK2280 pKa = 10.62SNEE2283 pKa = 3.76GQILTGCKK2291 pKa = 10.22LIIQGVLNEE2300 pKa = 4.26VVEE2303 pKa = 4.37YY2304 pKa = 9.16TALDD2308 pKa = 3.72SEE2310 pKa = 4.62QTIHH2314 pKa = 6.23SAHH2317 pKa = 6.04YY2318 pKa = 9.62SIPFSTFIILPEE2330 pKa = 4.0NYY2332 pKa = 9.7CYY2334 pKa = 11.05GNEE2337 pKa = 4.7DD2338 pKa = 2.94ITTEE2342 pKa = 4.22VEE2344 pKa = 4.36DD2345 pKa = 4.84IYY2347 pKa = 11.4FNSLNSRR2354 pKa = 11.84KK2355 pKa = 9.83LFTNATILIKK2365 pKa = 10.43ATVSYY2370 pKa = 10.71CKK2372 pKa = 10.51

Molecular weight: 247.6 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1D7XNH1|A0A1D7XNH1_9CLOT HEPN domain-containing protein OS=Clostridium taeniosporum OX=394958 GN=BGI42_13800 PE=4 SV=1
MM1 pKa = 7.17GRR3 pKa = 11.84EE4 pKa = 4.13DD5 pKa = 3.34NRR7 pKa = 11.84RR8 pKa = 11.84SGGRR12 pKa = 11.84GRR14 pKa = 11.84RR15 pKa = 11.84SKK17 pKa = 10.92RR18 pKa = 11.84KK19 pKa = 8.67VCAFCVDD26 pKa = 3.31KK27 pKa = 11.49AEE29 pKa = 4.67SIDD32 pKa = 3.62YY33 pKa = 10.94KK34 pKa = 11.04DD35 pKa = 3.2INKK38 pKa = 9.06LRR40 pKa = 11.84KK41 pKa = 9.21YY42 pKa = 7.83VTEE45 pKa = 4.22RR46 pKa = 11.84GKK48 pKa = 10.15ILPRR52 pKa = 11.84RR53 pKa = 11.84ISGTCAKK60 pKa = 9.97HH61 pKa = 5.6QRR63 pKa = 11.84QLTDD67 pKa = 4.19AIKK70 pKa = 10.18RR71 pKa = 11.84ARR73 pKa = 11.84NIALLPFTTEE83 pKa = 3.59

Molecular weight: 9.61 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2948

0

2948

916512

26

3051

310.9

35.22

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.084 ± 0.051

1.233 ± 0.018

5.699 ± 0.033

7.495 ± 0.051

4.366 ± 0.034

6.164 ± 0.045

1.25 ± 0.016

10.383 ± 0.064

9.691 ± 0.051

8.998 ± 0.047

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.459 ± 0.019

7.133 ± 0.049

2.605 ± 0.03

2.187 ± 0.019

3.103 ± 0.031

6.325 ± 0.038

4.827 ± 0.049

6.14 ± 0.043

0.672 ± 0.014

4.187 ± 0.036
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski