Arthrobacter woluwensis

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Actinobacteria; Actinomycetia; Micrococcales; Micrococcaceae

Average proteome isoelectric point is 6.28

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3355 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1H4R2H8|A0A1H4R2H8_9MICC Protein N-acetyltransferase RimJ/RimL family OS=Arthrobacter woluwensis OX=156980 GN=SAMN04489745_2451 PE=4 SV=1
MM1 pKa = 7.38SNIPAEE7 pKa = 4.07LSYY10 pKa = 10.03TAEE13 pKa = 4.41HH14 pKa = 6.42EE15 pKa = 4.58WVASTEE21 pKa = 3.79QDD23 pKa = 3.18GVVRR27 pKa = 11.84VGITDD32 pKa = 4.44FAQDD36 pKa = 3.24ALGDD40 pKa = 3.66VVYY43 pKa = 10.65AQVPEE48 pKa = 4.49AGTAVTANDD57 pKa = 3.28VVGEE61 pKa = 4.18VEE63 pKa = 4.35STKK66 pKa = 10.71SVSDD70 pKa = 3.26IYY72 pKa = 11.46APVSGEE78 pKa = 3.27IVARR82 pKa = 11.84NEE84 pKa = 4.35SLDD87 pKa = 3.98ADD89 pKa = 3.98PALINSDD96 pKa = 3.62PYY98 pKa = 9.67GAGWLFEE105 pKa = 3.99VRR107 pKa = 11.84IAGADD112 pKa = 3.64EE113 pKa = 4.44LSGLLSAEE121 pKa = 4.44AYY123 pKa = 8.56GQQVGG128 pKa = 3.53

Molecular weight: 13.35 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1H4MBM8|A0A1H4MBM8_9MICC Glycerol-3-phosphate dehydrogenase OS=Arthrobacter woluwensis OX=156980 GN=C6401_12175 PE=3 SV=1
MM1 pKa = 7.61KK2 pKa = 10.31VRR4 pKa = 11.84NSLRR8 pKa = 11.84ALKK11 pKa = 9.61KK12 pKa = 9.72IPGAQVVRR20 pKa = 11.84RR21 pKa = 11.84RR22 pKa = 11.84GKK24 pKa = 8.59TFVINKK30 pKa = 8.84KK31 pKa = 9.15NPRR34 pKa = 11.84FKK36 pKa = 10.85ARR38 pKa = 11.84QGG40 pKa = 3.28

Molecular weight: 4.65 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3355

0

3355

1100570

29

2555

328.0

35.12

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

12.856 ± 0.058

0.593 ± 0.01

5.619 ± 0.033

5.787 ± 0.056

3.232 ± 0.028

9.244 ± 0.044

2.08 ± 0.02

4.024 ± 0.029

2.674 ± 0.031

10.412 ± 0.055

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.815 ± 0.016

2.265 ± 0.027

5.564 ± 0.038

3.207 ± 0.025

6.787 ± 0.053

5.971 ± 0.038

5.884 ± 0.041

8.51 ± 0.039

1.481 ± 0.018

1.993 ± 0.021
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski