Acinetobacter phage Presley

Taxonomy: Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Schitoviridae; Presleyvirus; Acinetobacter virus Presley

Average proteome isoelectric point is 6.22

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 94 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|U5PZZ5|U5PZZ5_9CAUD Structural protein OS=Acinetobacter phage Presley OX=1406780 GN=Presley_81 PE=4 SV=1
MM1 pKa = 7.46INVIEE6 pKa = 4.39QYY8 pKa = 9.67TVSDD12 pKa = 3.61QCVMQLNHH20 pKa = 6.93HH21 pKa = 6.63IEE23 pKa = 4.11AGIYY27 pKa = 9.11TVDD30 pKa = 3.53LNYY33 pKa = 10.42MNGAVIATMMGSKK46 pKa = 10.35NEE48 pKa = 4.14STATWFYY55 pKa = 11.24EE56 pKa = 3.92NLEE59 pKa = 4.05GSYY62 pKa = 11.12EE63 pKa = 3.98EE64 pKa = 4.25LAEE67 pKa = 4.13VQANGEE73 pKa = 4.12

Molecular weight: 8.21 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|U5PVX8|U5PVX8_9CAUD Uncharacterized protein OS=Acinetobacter phage Presley OX=1406780 GN=Presley_78 PE=4 SV=1
MM1 pKa = 7.4NKK3 pKa = 10.31AIMVVGVVIGSIILITVVAYY23 pKa = 9.74VISLIVMVVTYY34 pKa = 8.53VLPFVVIVFCIGYY47 pKa = 10.31ASCLYY52 pKa = 10.49NKK54 pKa = 9.95RR55 pKa = 11.84KK56 pKa = 9.99KK57 pKa = 10.0RR58 pKa = 11.84DD59 pKa = 3.17RR60 pKa = 3.84

Molecular weight: 6.69 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

94

0

94

24559

20

3492

261.3

29.38

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.928 ± 0.447

0.745 ± 0.132

6.564 ± 0.197

6.515 ± 0.249

3.665 ± 0.205

5.937 ± 0.245

2.02 ± 0.171

6.735 ± 0.301

6.657 ± 0.218

8.608 ± 0.215

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.765 ± 0.157

5.904 ± 0.253

3.766 ± 0.165

4.52 ± 0.291

4.247 ± 0.135

5.859 ± 0.251

6.368 ± 0.257

6.128 ± 0.221

1.022 ± 0.102

4.047 ± 0.222
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski