Lacinutrix sp. CAU 1491

Taxonomy: cellular organisms; Bacteria; FCB group; Bacteroidetes/Chlorobi group; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Lacinutrix; unclassified Lacinutrix

Average proteome isoelectric point is 6.76

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2986 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    

Protein with the lowest isoelectric point:
>tr|A0A4U0EVL1|A0A4U0EVL1_9FLAO TetR/AcrR family transcriptional regulator OS=Lacinutrix sp. CAU 1491 OX=2565367 GN=E5167_08800 PE=4 SV=1
MM1 pKa = 7.65KK2 pKa = 9.11KK3 pKa = 6.63TTYY6 pKa = 10.84SLYY9 pKa = 10.37HH10 pKa = 5.94WMCILLLLVSGSLYY24 pKa = 10.08SQTVIDD30 pKa = 4.74SEE32 pKa = 4.55DD33 pKa = 3.85FEE35 pKa = 5.19SGWGIWNDD43 pKa = 3.45GGSDD47 pKa = 3.64CFLNTGSILSGANSVNLQDD66 pKa = 5.43NNNQDD71 pKa = 2.79SSMYY75 pKa = 10.58TNDD78 pKa = 3.31IDD80 pKa = 3.9LTTFGSVTIVFDD92 pKa = 4.12FRR94 pKa = 11.84TSGFNNGHH102 pKa = 6.72DD103 pKa = 3.8FFIEE107 pKa = 4.44FSNNGGASWNATPITTYY124 pKa = 10.68VRR126 pKa = 11.84GSNFNNDD133 pKa = 2.78TTYY136 pKa = 10.5TGEE139 pKa = 4.15TATITAGGTYY149 pKa = 9.72TFTANSRR156 pKa = 11.84FRR158 pKa = 11.84FRR160 pKa = 11.84ADD162 pKa = 3.0ASQSSDD168 pKa = 3.57DD169 pKa = 4.54LYY171 pKa = 10.86IDD173 pKa = 3.56NVVMTGYY180 pKa = 10.06PKK182 pKa = 10.25TPEE185 pKa = 3.69INITGLGNTINDD197 pKa = 3.67GDD199 pKa = 4.19TTPSVTDD206 pKa = 3.38DD207 pKa = 3.51TDD209 pKa = 3.72FGTVNVAGGTNPNTFTIQNTGTAALSLTGASPYY242 pKa = 9.37VTISGTNAADD252 pKa = 3.86FAVTTAPANTIASSGSTTFVITFDD276 pKa = 3.76PSAAGIRR283 pKa = 11.84TATVSIANDD292 pKa = 3.55DD293 pKa = 4.29SNEE296 pKa = 3.75NPYY299 pKa = 11.21NFDD302 pKa = 3.29IEE304 pKa = 4.72GNGYY308 pKa = 10.18VPVPEE313 pKa = 4.99INVQGNSVDD322 pKa = 4.56IVDD325 pKa = 4.64GDD327 pKa = 3.92NTPSLTDD334 pKa = 3.16ATDD337 pKa = 3.32YY338 pKa = 9.61GTVNVEE344 pKa = 4.18SLVSRR349 pKa = 11.84TFTIQNTGTADD360 pKa = 3.56LTISSITLSNTTDD373 pKa = 3.71FSIIGTPYY381 pKa = 9.81ASPVASSGSTTFTVQFNSLTIGTKK405 pKa = 6.92TTTVTINNNDD415 pKa = 3.64SDD417 pKa = 3.83EE418 pKa = 4.25STYY421 pKa = 11.03QFDD424 pKa = 3.4IEE426 pKa = 5.3ARR428 pKa = 11.84AEE430 pKa = 4.09QNFFDD435 pKa = 4.39SDD437 pKa = 3.39GDD439 pKa = 4.18GIYY442 pKa = 10.96DD443 pKa = 5.19NIDD446 pKa = 3.01IDD448 pKa = 4.97DD449 pKa = 5.02DD450 pKa = 4.29NDD452 pKa = 4.8GILDD456 pKa = 3.84SEE458 pKa = 4.85EE459 pKa = 4.09EE460 pKa = 4.15LACQVSSTSTVMNYY474 pKa = 10.27KK475 pKa = 10.13FLNEE479 pKa = 4.12TFGEE483 pKa = 4.68GTNRR487 pKa = 11.84TTINTTYY494 pKa = 11.03DD495 pKa = 2.87ATTTYY500 pKa = 10.35CYY502 pKa = 10.71EE503 pKa = 5.29DD504 pKa = 3.81GTASCPSLGGIDD516 pKa = 4.94LNDD519 pKa = 3.47GEE521 pKa = 4.57YY522 pKa = 10.82AVYY525 pKa = 8.74YY526 pKa = 9.0TAGTNDD532 pKa = 3.46GTNNTPNGEE541 pKa = 4.08VASWVDD547 pKa = 3.39GLWYY551 pKa = 9.57TGEE554 pKa = 4.21DD555 pKa = 3.46HH556 pKa = 7.58TSGDD560 pKa = 3.78TNGRR564 pKa = 11.84MAMFNASYY572 pKa = 11.07DD573 pKa = 3.3PGTFYY578 pKa = 10.62TATITGALPNVPVTYY593 pKa = 10.62SFWVLNLDD601 pKa = 3.46ISTANNINTRR611 pKa = 11.84IRR613 pKa = 11.84PNILVEE619 pKa = 4.16FRR621 pKa = 11.84DD622 pKa = 3.4AGGNVLQSITTGDD635 pKa = 3.56IPPSIEE641 pKa = 3.93GDD643 pKa = 3.63PANSWHH649 pKa = 6.46QFTADD654 pKa = 3.09LTLNVSEE661 pKa = 4.97FYY663 pKa = 11.17VYY665 pKa = 10.18FINNNPGGLGNDD677 pKa = 3.81LAIDD681 pKa = 5.14DD682 pKa = 4.33IVISQTLCDD691 pKa = 3.97TDD693 pKa = 3.4NDD695 pKa = 4.78GIADD699 pKa = 3.99VFDD702 pKa = 5.4LDD704 pKa = 4.48SDD706 pKa = 3.9NDD708 pKa = 4.68GIPDD712 pKa = 3.57VVEE715 pKa = 4.74AGLGDD720 pKa = 4.12LSEE723 pKa = 4.62GTATLTGIASWVDD736 pKa = 3.19ANGNGMHH743 pKa = 7.34DD744 pKa = 3.71LAEE747 pKa = 4.71GNSVLDD753 pKa = 3.58TDD755 pKa = 4.52GDD757 pKa = 4.29GVPNYY762 pKa = 10.71LDD764 pKa = 4.89LDD766 pKa = 4.08SDD768 pKa = 3.73NDD770 pKa = 4.28TIFDD774 pKa = 3.71VDD776 pKa = 3.38EE777 pKa = 4.83SGAGNTADD785 pKa = 4.17PSYY788 pKa = 11.4QNGDD792 pKa = 2.87GDD794 pKa = 3.75ITGDD798 pKa = 3.82GVGDD802 pKa = 4.29GPDD805 pKa = 3.11TDD807 pKa = 5.56AIRR810 pKa = 11.84EE811 pKa = 3.98TDD813 pKa = 3.19IDD815 pKa = 3.92SDD817 pKa = 3.88GTSEE821 pKa = 4.23YY822 pKa = 9.81FTDD825 pKa = 6.12GILDD829 pKa = 3.35IYY831 pKa = 10.96DD832 pKa = 3.85YY833 pKa = 11.72YY834 pKa = 11.75NGGTFGTAYY843 pKa = 10.48GNSNQGLGNTYY854 pKa = 10.54YY855 pKa = 11.31VLDD858 pKa = 4.47SDD860 pKa = 4.72SDD862 pKa = 4.35GIPDD866 pKa = 3.7YY867 pKa = 11.04MDD869 pKa = 3.17ITSDD873 pKa = 3.25GVTFDD878 pKa = 4.11ISHH881 pKa = 6.79TLYY884 pKa = 11.37ANLDD888 pKa = 3.77ANNDD892 pKa = 3.56GVIDD896 pKa = 3.99DD897 pKa = 4.71TNDD900 pKa = 3.36SEE902 pKa = 5.42GDD904 pKa = 3.87GILDD908 pKa = 5.35LFDD911 pKa = 4.13TDD913 pKa = 4.42DD914 pKa = 3.99AAFGSPRR921 pKa = 11.84DD922 pKa = 3.77LDD924 pKa = 4.11RR925 pKa = 11.84KK926 pKa = 9.12LHH928 pKa = 6.43LYY930 pKa = 10.35FDD932 pKa = 3.92GRR934 pKa = 11.84NDD936 pKa = 3.92YY937 pKa = 11.02IEE939 pKa = 4.68DD940 pKa = 3.61ASVIGTWSEE949 pKa = 3.72ATQMGWIKK957 pKa = 10.21IDD959 pKa = 3.38PTITGGSKK967 pKa = 9.68TIMGQDD973 pKa = 2.96NFYY976 pKa = 9.53ITLNADD982 pKa = 3.91LSISATANGTTITNGGALATDD1003 pKa = 3.81RR1004 pKa = 11.84WVHH1007 pKa = 6.55IGATYY1012 pKa = 11.2SNIDD1016 pKa = 4.13NIFKK1020 pKa = 10.78LYY1022 pKa = 10.48INGLEE1027 pKa = 4.19VSSSAISGSLPSDD1040 pKa = 3.29TSSYY1044 pKa = 10.46TLGRR1048 pKa = 11.84NPDD1051 pKa = 3.33TDD1053 pKa = 2.84SGYY1056 pKa = 10.72FMGYY1060 pKa = 8.68IDD1062 pKa = 3.85EE1063 pKa = 5.28AKK1065 pKa = 10.81VFDD1068 pKa = 4.17KK1069 pKa = 11.22ALTADD1074 pKa = 4.37EE1075 pKa = 4.3YY1076 pKa = 11.32QKK1078 pKa = 11.19NVYY1081 pKa = 9.26QEE1083 pKa = 4.68IEE1085 pKa = 4.44DD1086 pKa = 3.72NTLVRR1091 pKa = 11.84GAIIPKK1097 pKa = 10.31NITTLSWSNVQRR1109 pKa = 11.84YY1110 pKa = 7.47FRR1112 pKa = 11.84FDD1114 pKa = 3.18VYY1116 pKa = 11.2KK1117 pKa = 10.96DD1118 pKa = 4.66DD1119 pKa = 3.93ITDD1122 pKa = 4.09DD1123 pKa = 3.98LTTGTIDD1130 pKa = 3.05TGTGAKK1136 pKa = 8.98MYY1138 pKa = 9.81NFKK1141 pKa = 10.75IIDD1144 pKa = 3.85YY1145 pKa = 10.22QSAPLPFVTQQSGSLPTAVDD1165 pKa = 3.23IASDD1169 pKa = 4.03GVNGADD1175 pKa = 4.43AITYY1179 pKa = 7.95DD1180 pKa = 3.25WSIVRR1185 pKa = 11.84VEE1187 pKa = 4.82HH1188 pKa = 7.94DD1189 pKa = 4.66DD1190 pKa = 2.88ITYY1193 pKa = 10.77NDD1195 pKa = 3.92RR1196 pKa = 11.84QKK1198 pKa = 11.29HH1199 pKa = 5.45LGLFVNEE1206 pKa = 4.69LDD1208 pKa = 4.37AGLNPIEE1215 pKa = 5.24FSVQNDD1221 pKa = 3.58SEE1223 pKa = 5.83LNVSWYY1229 pKa = 10.86LKK1231 pKa = 10.71LDD1233 pKa = 3.44GLIDD1237 pKa = 4.62LEE1239 pKa = 4.89GEE1241 pKa = 4.26SQLVQGSDD1249 pKa = 3.08STLDD1253 pKa = 3.37INSKK1257 pKa = 8.7GTIEE1261 pKa = 4.9RR1262 pKa = 11.84DD1263 pKa = 3.49QQGTADD1269 pKa = 4.48LYY1271 pKa = 10.78TYY1273 pKa = 9.98NYY1275 pKa = 7.23WAAPVGVTSTISNNNNYY1292 pKa = 7.81TLPDD1296 pKa = 3.65VLNDD1300 pKa = 3.52GTTPAIPSSINWLTSGYY1317 pKa = 10.23DD1318 pKa = 3.55GTSGSPVGIADD1329 pKa = 3.37YY1330 pKa = 9.81WIWKK1334 pKa = 7.23YY1335 pKa = 11.44ANRR1338 pKa = 11.84VSDD1341 pKa = 5.27NYY1343 pKa = 10.66PSWQHH1348 pKa = 4.87VRR1350 pKa = 11.84STGSLQPGEE1359 pKa = 4.69GYY1361 pKa = 8.82TMKK1364 pKa = 10.21GTTNTSGAIFTEE1376 pKa = 3.92QNYY1379 pKa = 8.94VFNGKK1384 pKa = 7.73PHH1386 pKa = 6.59NGDD1389 pKa = 2.72ITLTLSAGNDD1399 pKa = 3.55YY1400 pKa = 11.19LIGNPYY1406 pKa = 10.72ASAIDD1411 pKa = 3.71ANEE1414 pKa = 4.58FILDD1418 pKa = 4.36NISDD1422 pKa = 4.01GAGRR1426 pKa = 11.84AGSNIINGTLYY1437 pKa = 10.28FWEE1440 pKa = 4.83HH1441 pKa = 6.05FASSTHH1447 pKa = 6.26ILSEE1451 pKa = 4.08YY1452 pKa = 8.82QGGYY1456 pKa = 8.85GAYY1459 pKa = 9.19TLITGTAAINNDD1471 pKa = 2.61VRR1473 pKa = 11.84INHH1476 pKa = 6.37TGGLTSSKK1484 pKa = 10.2GAPEE1488 pKa = 4.02RR1489 pKa = 11.84YY1490 pKa = 9.41IPVAQGFFVTADD1502 pKa = 3.18TGGSITFKK1510 pKa = 10.55NSQRR1514 pKa = 11.84TFKK1517 pKa = 10.67TEE1519 pKa = 3.56AADD1522 pKa = 3.42PSVFMRR1528 pKa = 11.84VNDD1531 pKa = 4.21GKK1533 pKa = 11.19SKK1535 pKa = 9.96QKK1537 pKa = 10.3KK1538 pKa = 9.73SSVTTSKK1545 pKa = 7.72TTNDD1549 pKa = 2.84TRR1551 pKa = 11.84EE1552 pKa = 4.07VIKK1555 pKa = 10.78LYY1557 pKa = 10.53FDD1559 pKa = 3.63SPKK1562 pKa = 10.54GYY1564 pKa = 9.74HH1565 pKa = 5.53RR1566 pKa = 11.84QIAVGIDD1573 pKa = 3.17SNTTDD1578 pKa = 3.4GHH1580 pKa = 6.88DD1581 pKa = 3.27IGYY1584 pKa = 7.99DD1585 pKa = 3.21APLIEE1590 pKa = 5.95DD1591 pKa = 3.63NVEE1594 pKa = 3.9DD1595 pKa = 4.48MFWTFDD1601 pKa = 3.36NNKK1604 pKa = 9.42FVIQGVSDD1612 pKa = 3.71FNINRR1617 pKa = 11.84TLPLGVKK1624 pKa = 9.32IDD1626 pKa = 3.81QEE1628 pKa = 4.39GTATIRR1634 pKa = 11.84VDD1636 pKa = 3.52YY1637 pKa = 10.8LEE1639 pKa = 5.54NIPIDD1644 pKa = 3.75TNIYY1648 pKa = 10.54LLDD1651 pKa = 4.35KK1652 pKa = 10.47EE1653 pKa = 4.5LEE1655 pKa = 4.17IYY1657 pKa = 10.53HH1658 pKa = 6.96DD1659 pKa = 3.99LRR1661 pKa = 11.84EE1662 pKa = 4.29SNYY1665 pKa = 10.41EE1666 pKa = 3.78VFLTIGEE1673 pKa = 4.27HH1674 pKa = 5.44YY1675 pKa = 10.79DD1676 pKa = 3.14RR1677 pKa = 11.84FEE1679 pKa = 3.87ITFSNGEE1686 pKa = 4.14EE1687 pKa = 3.93EE1688 pKa = 4.11VDD1690 pKa = 4.39PIEE1693 pKa = 5.42GLTKK1697 pKa = 10.54TNLHH1701 pKa = 6.57FSNDD1705 pKa = 3.35KK1706 pKa = 10.77EE1707 pKa = 4.56SIIVINPDD1715 pKa = 2.98NLIINSVKK1723 pKa = 9.59MVNILGQSVFKK1734 pKa = 10.35MDD1736 pKa = 3.2TAFEE1740 pKa = 4.12DD1741 pKa = 4.21RR1742 pKa = 11.84YY1743 pKa = 11.16KK1744 pKa = 10.88EE1745 pKa = 3.76ITVKK1749 pKa = 10.55HH1750 pKa = 6.4LNTGAYY1756 pKa = 8.64IINMITNKK1764 pKa = 10.44GLITKK1769 pKa = 9.9KK1770 pKa = 10.7VVVEE1774 pKa = 4.07

Molecular weight:
192.25 kDa
Isoelectric point according different methods:






Protein with the highest isoelectric point:
>tr|A0A4V5LQD5|A0A4V5LQD5_9FLAO DUF2807 domain-containing protein OS=Lacinutrix sp. CAU 1491 OX=2565367 GN=E5167_10865 PE=4 SV=1
MM1 pKa = 7.45KK2 pKa = 9.59RR3 pKa = 11.84TFQPSKK9 pKa = 9.13RR10 pKa = 11.84KK11 pKa = 9.48RR12 pKa = 11.84RR13 pKa = 11.84NKK15 pKa = 9.49HH16 pKa = 3.94GFRR19 pKa = 11.84EE20 pKa = 4.27RR21 pKa = 11.84MASANGRR28 pKa = 11.84KK29 pKa = 9.04VLARR33 pKa = 11.84RR34 pKa = 11.84RR35 pKa = 11.84AKK37 pKa = 10.09GRR39 pKa = 11.84KK40 pKa = 7.97KK41 pKa = 10.66LSVSSEE47 pKa = 3.9LRR49 pKa = 11.84HH50 pKa = 6.16KK51 pKa = 10.53KK52 pKa = 10.04

Molecular weight:
6.25 kDa
Isoelectric point according different methods:






Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2986

0

2986

998528

28

2381

334.4

37.84

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.024 ± 0.048

0.719 ± 0.013

5.624 ± 0.035

6.421 ± 0.044

5.207 ± 0.035

6.132 ± 0.046

1.817 ± 0.018

8.214 ± 0.045

8.226 ± 0.053

9.215 ± 0.049

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.19 ± 0.023

6.684 ± 0.049

3.261 ± 0.022

3.255 ± 0.023

3.32 ± 0.029

6.555 ± 0.037

5.799 ± 0.042

6.145 ± 0.031

1.049 ± 0.016

4.14 ± 0.031

Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski