Gyrovirus 10

Taxonomy: Viruses; Anelloviridae; Gyrovirus; unclassified Gyrovirus

Average proteome isoelectric point is 8.17

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A2U9N4H7|A0A2U9N4H7_9VIRU Apoptin OS=Gyrovirus 10 OX=2218660 GN=VP3 PE=3 SV=1
MM1 pKa = 7.27AHH3 pKa = 7.45WSPATPIKK11 pKa = 10.45SPPITPPDD19 pKa = 3.15KK20 pKa = 10.66RR21 pKa = 11.84NYY23 pKa = 6.71VTKK26 pKa = 10.15TINGINASNKK36 pKa = 8.36FCNVGWDD43 pKa = 3.65KK44 pKa = 11.25LQNSPDD50 pKa = 3.5WYY52 pKa = 8.75RR53 pKa = 11.84ANYY56 pKa = 9.24NRR58 pKa = 11.84TIATWLRR65 pKa = 11.84DD66 pKa = 3.5CKK68 pKa = 9.82TAHH71 pKa = 6.76SKK73 pKa = 9.81ICSCSSFRR81 pKa = 11.84NHH83 pKa = 5.41WHH85 pKa = 5.23QTDD88 pKa = 3.33ATLTTDD94 pKa = 3.99SSTQTDD100 pKa = 3.52VDD102 pKa = 3.55TSPIIRR108 pKa = 11.84AGEE111 pKa = 3.75RR112 pKa = 11.84ARR114 pKa = 11.84RR115 pKa = 11.84KK116 pKa = 9.05ILARR120 pKa = 11.84EE121 pKa = 3.95RR122 pKa = 11.84RR123 pKa = 11.84QATPGNRR130 pKa = 11.84KK131 pKa = 9.21KK132 pKa = 10.46KK133 pKa = 9.79HH134 pKa = 5.55KK135 pKa = 9.32TVTWDD140 pKa = 3.0IGPEE144 pKa = 4.0EE145 pKa = 4.74SSTPSDD151 pKa = 3.53EE152 pKa = 5.8DD153 pKa = 3.72DD154 pKa = 4.72GEE156 pKa = 5.0SIDD159 pKa = 5.83AFDD162 pKa = 4.73LTEE165 pKa = 6.02DD166 pKa = 4.68DD167 pKa = 5.34DD168 pKa = 6.25DD169 pKa = 4.55SAFANVNFDD178 pKa = 4.23LATDD182 pKa = 4.3LDD184 pKa = 4.17AALNAPSGTNTPARR198 pKa = 11.84MWW200 pKa = 3.83

Molecular weight: 22.43 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A2U9N6R0|A0A2U9N6R0_9VIRU CA1 OS=Gyrovirus 10 OX=2218660 GN=VP1 PE=3 SV=1
MM1 pKa = 7.98GYY3 pKa = 10.06RR4 pKa = 11.84SRR6 pKa = 11.84GKK8 pKa = 9.6FYY10 pKa = 9.87TFRR13 pKa = 11.84RR14 pKa = 11.84GRR16 pKa = 11.84WRR18 pKa = 11.84KK19 pKa = 8.41HH20 pKa = 3.91RR21 pKa = 11.84RR22 pKa = 11.84FRR24 pKa = 11.84PYY26 pKa = 9.25RR27 pKa = 11.84RR28 pKa = 11.84RR29 pKa = 11.84RR30 pKa = 11.84RR31 pKa = 11.84FRR33 pKa = 11.84FRR35 pKa = 11.84KK36 pKa = 8.53RR37 pKa = 11.84KK38 pKa = 8.72FRR40 pKa = 11.84PRR42 pKa = 11.84YY43 pKa = 7.73GFRR46 pKa = 11.84RR47 pKa = 11.84RR48 pKa = 11.84FKK50 pKa = 9.75RR51 pKa = 11.84AFWNQHH57 pKa = 4.93PGSYY61 pKa = 9.62VVRR64 pKa = 11.84LPNPQNTLNLMFQGIVWFPLPKK86 pKa = 10.37YY87 pKa = 10.13CINSTNTLKK96 pKa = 11.12NIDD99 pKa = 3.82VQNVITCRR107 pKa = 11.84VGSIHH112 pKa = 7.44ISLKK116 pKa = 10.19QFLLAVMSLSGTTKK130 pKa = 10.74LGGPSIGKK138 pKa = 9.82LYY140 pKa = 11.22YY141 pKa = 9.56EE142 pKa = 5.04AKK144 pKa = 10.43DD145 pKa = 3.55KK146 pKa = 11.25LGQAGNYY153 pKa = 9.89PYY155 pKa = 9.45MEE157 pKa = 5.51KK158 pKa = 10.01IASQTQSASLPSQWWRR174 pKa = 11.84WAIMFMYY181 pKa = 10.31PPDD184 pKa = 3.99NKK186 pKa = 10.9LIDD189 pKa = 4.14YY190 pKa = 9.28FPAQPDD196 pKa = 3.79PKK198 pKa = 10.52DD199 pKa = 3.51LQNILGGWSLFRR211 pKa = 11.84HH212 pKa = 6.18KK213 pKa = 9.2KK214 pKa = 7.72TKK216 pKa = 9.84VAIIATSPQGNWSPVASLTSQDD238 pKa = 3.58SYY240 pKa = 11.93FMRR243 pKa = 11.84HH244 pKa = 5.97CSNVFAVTKK253 pKa = 10.83GNFPLSGAVGTKK265 pKa = 9.48TPTSFLPDD273 pKa = 3.04EE274 pKa = 4.87CEE276 pKa = 4.18YY277 pKa = 10.6PSRR280 pKa = 11.84PPQAEE285 pKa = 3.88QTNQTGIPGQCYY297 pKa = 8.21TRR299 pKa = 11.84QPQDD303 pKa = 3.03GLVEE307 pKa = 4.16TDD309 pKa = 2.69CWYY312 pKa = 10.53SQEE315 pKa = 4.3TFPSFGTLSALGASWAFPPGQRR337 pKa = 11.84SFSHH341 pKa = 6.63GSVNHH346 pKa = 5.03HH347 pKa = 7.26TITGSGDD354 pKa = 3.32PEE356 pKa = 4.07GQRR359 pKa = 11.84WRR361 pKa = 11.84TLNPLTTFPITSSEE375 pKa = 3.95QGSDD379 pKa = 3.42YY380 pKa = 11.41DD381 pKa = 3.96RR382 pKa = 11.84VIASIYY388 pKa = 9.37LAQGSDD394 pKa = 2.75QFLPYY399 pKa = 10.31KK400 pKa = 10.66YY401 pKa = 9.96GTDD404 pKa = 3.13QDD406 pKa = 3.86QPNWRR411 pKa = 11.84PQKK414 pKa = 9.3FTQQMNVWARR424 pKa = 11.84IGEE427 pKa = 4.14FRR429 pKa = 11.84AA430 pKa = 3.62

Molecular weight: 49.63 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3

0

3

738

108

430

246.0

27.97

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.962 ± 1.434

1.491 ± 0.208

5.149 ± 2.154

2.981 ± 0.56

4.336 ± 1.64

6.504 ± 1.273

2.304 ± 0.398

4.878 ± 0.389

5.014 ± 0.531

6.233 ± 1.039

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.762 ± 0.321

4.743 ± 0.943

7.588 ± 0.44

5.556 ± 1.519

8.266 ± 0.51

8.672 ± 0.577

8.672 ± 1.622

3.794 ± 0.657

2.846 ± 0.432

3.252 ± 1.179
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski