Bat associated circovirus 1

Taxonomy: Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cirlivirales; Circoviridae; Circovirus

Average proteome isoelectric point is 8.45

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|R4L9E4|R4L9E4_9CIRC Capsid protein OS=Bat associated circovirus 1 OX=1868218 GN=cap PE=3 SV=1
MM1 pKa = 7.46EE2 pKa = 4.57MAGHH6 pKa = 6.25PCEE9 pKa = 4.97RR10 pKa = 11.84YY11 pKa = 10.13CFTINNYY18 pKa = 9.0SEE20 pKa = 4.06EE21 pKa = 4.62DD22 pKa = 3.4IEE24 pKa = 4.23AVKK27 pKa = 10.96AFLVPDD33 pKa = 3.56NAEE36 pKa = 3.78YY37 pKa = 10.58AIVGKK42 pKa = 10.44EE43 pKa = 3.62KK44 pKa = 11.17GEE46 pKa = 4.05NGTPHH51 pKa = 6.48LQGFVNLKK59 pKa = 10.05KK60 pKa = 10.61KK61 pKa = 9.7MRR63 pKa = 11.84FNPFKK68 pKa = 10.66AALGGRR74 pKa = 11.84AHH76 pKa = 7.3IEE78 pKa = 3.82QARR81 pKa = 11.84GTDD84 pKa = 3.67LDD86 pKa = 3.68NKK88 pKa = 9.98RR89 pKa = 11.84YY90 pKa = 9.18CSKK93 pKa = 11.18GGDD96 pKa = 3.5LLLEE100 pKa = 4.22VGEE103 pKa = 4.64PGKK106 pKa = 10.33QGKK109 pKa = 9.96RR110 pKa = 11.84SDD112 pKa = 3.51LKK114 pKa = 11.13EE115 pKa = 3.9AVTLLNSGANMTAVARR131 pKa = 11.84AYY133 pKa = 9.02PEE135 pKa = 3.65VFIRR139 pKa = 11.84YY140 pKa = 8.65GRR142 pKa = 11.84GLRR145 pKa = 11.84DD146 pKa = 3.45YY147 pKa = 10.83VITAGLSQQRR157 pKa = 11.84AWKK160 pKa = 8.44TEE162 pKa = 3.34VHH164 pKa = 6.42VIVGVPGVGKK174 pKa = 10.03SRR176 pKa = 11.84HH177 pKa = 4.83VSEE180 pKa = 4.27QHH182 pKa = 6.42SDD184 pKa = 3.42IYY186 pKa = 10.2WKK188 pKa = 10.17PRR190 pKa = 11.84GKK192 pKa = 8.98WWDD195 pKa = 4.15GYY197 pKa = 10.73CNQEE201 pKa = 4.39VVCLDD206 pKa = 4.83DD207 pKa = 3.91YY208 pKa = 11.47YY209 pKa = 11.91GWIPYY214 pKa = 10.31DD215 pKa = 4.05DD216 pKa = 5.12LLRR219 pKa = 11.84LCDD222 pKa = 4.13RR223 pKa = 11.84YY224 pKa = 10.18PLRR227 pKa = 11.84VEE229 pKa = 4.36TKK231 pKa = 8.38GGTVSFVAKK240 pKa = 10.32KK241 pKa = 10.3IYY243 pKa = 8.87ITSNKK248 pKa = 8.9QIKK251 pKa = 9.38DD252 pKa = 2.98WYY254 pKa = 10.2NFEE257 pKa = 4.17EE258 pKa = 4.59LKK260 pKa = 10.53VDD262 pKa = 3.39PRR264 pKa = 11.84ALYY267 pKa = 10.43RR268 pKa = 11.84RR269 pKa = 11.84VTSYY273 pKa = 11.31KK274 pKa = 9.81VMRR277 pKa = 11.84EE278 pKa = 3.69GGEE281 pKa = 4.09LYY283 pKa = 10.7DD284 pKa = 4.79VVMTGDD290 pKa = 3.31NKK292 pKa = 10.54INYY295 pKa = 8.4

Molecular weight: 33.69 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|R4L9E4|R4L9E4_9CIRC Capsid protein OS=Bat associated circovirus 1 OX=1868218 GN=cap PE=3 SV=1
MM1 pKa = 7.94PIRR4 pKa = 11.84RR5 pKa = 11.84RR6 pKa = 11.84SRR8 pKa = 11.84YY9 pKa = 7.19SRR11 pKa = 11.84RR12 pKa = 11.84RR13 pKa = 11.84RR14 pKa = 11.84WRR16 pKa = 11.84RR17 pKa = 11.84NTRR20 pKa = 11.84RR21 pKa = 11.84RR22 pKa = 11.84RR23 pKa = 11.84VARR26 pKa = 11.84GAYY29 pKa = 8.5RR30 pKa = 11.84WRR32 pKa = 11.84RR33 pKa = 11.84KK34 pKa = 10.04NGIINVRR41 pKa = 11.84LSATKK46 pKa = 10.02DD47 pKa = 2.63WTMASTTAEE56 pKa = 4.56GYY58 pKa = 9.63NVARR62 pKa = 11.84LEE64 pKa = 4.28VNLRR68 pKa = 11.84QFMPAGPGSAINTKK82 pKa = 10.08SIPWAYY88 pKa = 10.59YY89 pKa = 9.97RR90 pKa = 11.84IRR92 pKa = 11.84KK93 pKa = 7.77MKK95 pKa = 10.71FEE97 pKa = 4.98ILPKK101 pKa = 9.69MIPAQTPYY109 pKa = 10.51RR110 pKa = 11.84YY111 pKa = 10.16GSTAIYY117 pKa = 10.62LGMQAPAPTQGKK129 pKa = 7.78TYY131 pKa = 10.3DD132 pKa = 3.39PHH134 pKa = 7.41LKK136 pKa = 9.95HH137 pKa = 6.48VKK139 pKa = 10.06QNMSGLITDD148 pKa = 3.24QLKK151 pKa = 10.5RR152 pKa = 11.84YY153 pKa = 7.39FTPKK157 pKa = 9.73PDD159 pKa = 3.91LDD161 pKa = 5.18SITSTAWFQPNNKK174 pKa = 9.35ANQVWINMTNDD185 pKa = 3.67NITHH189 pKa = 5.88GQVGWSMEE197 pKa = 4.49RR198 pKa = 11.84ISNMAQNFKK207 pKa = 10.53IRR209 pKa = 11.84VTLYY213 pKa = 8.8VQFRR217 pKa = 11.84EE218 pKa = 4.41FNLIDD223 pKa = 3.88YY224 pKa = 7.74PAQAPLLVDD233 pKa = 4.1EE234 pKa = 5.54EE235 pKa = 4.38PSEE238 pKa = 4.17

Molecular weight: 27.97 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

533

238

295

266.5

30.83

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.754 ± 0.473

1.126 ± 0.659

4.878 ± 0.888

5.441 ± 1.217

2.814 ± 0.074

7.317 ± 1.578

1.689 ± 0.251

5.441 ± 0.75

6.942 ± 0.866

6.379 ± 0.537

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

3.002 ± 0.702

5.629 ± 0.641

5.066 ± 0.97

3.752 ± 0.755

9.006 ± 1.615

4.503 ± 0.562

5.441 ± 0.996

6.567 ± 1.384

2.439 ± 0.294

5.816 ± 0.453
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski