Torque teno virus 23

Taxonomy: Viruses; Anelloviridae; Alphatorquevirus

Average proteome isoelectric point is 7.38

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|Q9DTD5|Q9DTD5_9VIRU ORF2 ORF1 genes isolate: s-TTV CH65-2 OS=Torque teno virus 23 OX=687362 PE=4 SV=1
MM1 pKa = 7.45SLTPPAHH8 pKa = 5.79NASGIEE14 pKa = 4.11RR15 pKa = 11.84NWFEE19 pKa = 4.29SCFRR23 pKa = 11.84SHH25 pKa = 7.21AAVCGCGHH33 pKa = 6.79FVNHH37 pKa = 6.56LNVPAARR44 pKa = 11.84YY45 pKa = 8.94AFNGGPTPPGGPRR58 pKa = 11.84SGPPQIRR65 pKa = 11.84RR66 pKa = 11.84ALPAPAPPEE75 pKa = 4.29PPAHH79 pKa = 5.77NPWRR83 pKa = 11.84GGDD86 pKa = 3.39AGDD89 pKa = 3.36AAGRR93 pKa = 11.84GGGRR97 pKa = 11.84DD98 pKa = 3.2AGAGGGEE105 pKa = 4.17YY106 pKa = 10.6APEE109 pKa = 3.93EE110 pKa = 4.15LDD112 pKa = 3.58ALFAAVEE119 pKa = 4.25EE120 pKa = 4.6DD121 pKa = 3.79TQQ123 pKa = 3.8

Molecular weight: 12.62 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|Q9DTD5|Q9DTD5_9VIRU ORF2 ORF1 genes isolate: s-TTV CH65-2 OS=Torque teno virus 23 OX=687362 PE=4 SV=1
MM1 pKa = 7.27ARR3 pKa = 11.84WRR5 pKa = 11.84RR6 pKa = 11.84WRR8 pKa = 11.84RR9 pKa = 11.84RR10 pKa = 11.84RR11 pKa = 11.84PWWWKK16 pKa = 7.69RR17 pKa = 11.84RR18 pKa = 11.84RR19 pKa = 11.84RR20 pKa = 11.84RR21 pKa = 11.84WRR23 pKa = 11.84RR24 pKa = 11.84VRR26 pKa = 11.84PRR28 pKa = 11.84RR29 pKa = 11.84ARR31 pKa = 11.84RR32 pKa = 11.84TVRR35 pKa = 11.84RR36 pKa = 11.84RR37 pKa = 11.84RR38 pKa = 11.84RR39 pKa = 11.84RR40 pKa = 11.84YY41 pKa = 5.75TVRR44 pKa = 11.84RR45 pKa = 11.84RR46 pKa = 11.84RR47 pKa = 11.84WGRR50 pKa = 11.84RR51 pKa = 11.84RR52 pKa = 11.84GRR54 pKa = 11.84LRR56 pKa = 11.84RR57 pKa = 11.84TRR59 pKa = 11.84WRR61 pKa = 11.84RR62 pKa = 11.84TRR64 pKa = 11.84RR65 pKa = 11.84RR66 pKa = 11.84RR67 pKa = 11.84KK68 pKa = 9.66RR69 pKa = 11.84KK70 pKa = 7.66TLILRR75 pKa = 11.84QWNPATVRR83 pKa = 11.84SCRR86 pKa = 11.84IKK88 pKa = 10.86GLVPMVICGHH98 pKa = 5.23TRR100 pKa = 11.84AGRR103 pKa = 11.84NYY105 pKa = 10.56AMHH108 pKa = 6.65SEE110 pKa = 4.71DD111 pKa = 3.64YY112 pKa = 9.94PEE114 pKa = 3.84QGRR117 pKa = 11.84YY118 pKa = 8.76PFGGSLSTTTWSLKK132 pKa = 10.21VLFDD136 pKa = 3.39EE137 pKa = 4.86HH138 pKa = 7.37QKK140 pKa = 10.25FHH142 pKa = 6.2NRR144 pKa = 11.84WSRR147 pKa = 11.84SNQDD151 pKa = 2.8LDD153 pKa = 3.51LARR156 pKa = 11.84YY157 pKa = 8.46LGCRR161 pKa = 11.84FTFYY165 pKa = 10.5RR166 pKa = 11.84DD167 pKa = 2.85KK168 pKa = 10.43KK169 pKa = 7.65TDD171 pKa = 3.67YY172 pKa = 10.84IVTYY176 pKa = 10.36RR177 pKa = 11.84NKK179 pKa = 10.49PPFKK183 pKa = 10.09INKK186 pKa = 8.58LDD188 pKa = 3.52SPMSHH193 pKa = 7.52PGMLMQQKK201 pKa = 9.61QKK203 pKa = 10.78IIIPSYY209 pKa = 8.12DD210 pKa = 3.32TRR212 pKa = 11.84PGGPQKK218 pKa = 9.54ITVKK222 pKa = 10.07IRR224 pKa = 11.84PPKK227 pKa = 10.07LFQDD231 pKa = 3.01KK232 pKa = 9.89WYY234 pKa = 8.34TQTDD238 pKa = 3.69LCEE241 pKa = 4.12VNLVSFVVSACSLTHH256 pKa = 6.41PFCPPLTNNPCVTFQVLKK274 pKa = 10.77DD275 pKa = 4.05FYY277 pKa = 11.27YY278 pKa = 11.25GNLNIAEE285 pKa = 4.4KK286 pKa = 9.9TNSKK290 pKa = 11.0NIFEE294 pKa = 4.59TLKK297 pKa = 10.49KK298 pKa = 10.22HH299 pKa = 5.68PGYY302 pKa = 10.64YY303 pKa = 10.34EE304 pKa = 4.07NFLTQTLLLGDD315 pKa = 4.22VKK317 pKa = 10.33PAKK320 pKa = 10.9YY321 pKa = 10.53NDD323 pKa = 3.86TNGSLKK329 pKa = 9.9STITNASIKK338 pKa = 9.51TNNNGQFGMYY348 pKa = 10.1VYY350 pKa = 11.01DD351 pKa = 3.94KK352 pKa = 10.84DD353 pKa = 3.84KK354 pKa = 11.5LGAALQKK361 pKa = 10.6AVEE364 pKa = 4.68WYY366 pKa = 7.88HH367 pKa = 5.8QQYY370 pKa = 7.58QTHH373 pKa = 6.59NDD375 pKa = 2.83VHH377 pKa = 7.9SIYY380 pKa = 10.79GKK382 pKa = 8.4PTNEE386 pKa = 3.49YY387 pKa = 10.02LGYY390 pKa = 8.68HH391 pKa = 5.58TGIYY395 pKa = 10.24SPMVLSPMRR404 pKa = 11.84SNLDD408 pKa = 3.25MEE410 pKa = 5.33RR411 pKa = 11.84AFQDD415 pKa = 3.07VTYY418 pKa = 10.91NPNADD423 pKa = 3.52RR424 pKa = 11.84GKK426 pKa = 11.38GNIVWFQYY434 pKa = 7.35STRR437 pKa = 11.84NDD439 pKa = 3.08TTFDD443 pKa = 3.27EE444 pKa = 4.5KK445 pKa = 10.94QYY447 pKa = 11.4KK448 pKa = 9.81CVLQDD453 pKa = 3.51LPIWAALYY461 pKa = 10.01GYY463 pKa = 10.58SDD465 pKa = 3.72FVEE468 pKa = 5.17AEE470 pKa = 4.1LGISAEE476 pKa = 3.96IHH478 pKa = 5.6NSGVIVVVCPTLSTNEE494 pKa = 4.07KK495 pKa = 8.73GTIGAQIQGYY505 pKa = 9.42IFYY508 pKa = 8.04DD509 pKa = 3.45TLFGQGEE516 pKa = 4.25MPDD519 pKa = 3.84GRR521 pKa = 11.84GHH523 pKa = 7.16IPIYY527 pKa = 8.86WQSRR531 pKa = 11.84WYY533 pKa = 9.46PRR535 pKa = 11.84SSFQQQVIHH544 pKa = 7.15DD545 pKa = 4.35PVLSGPFSYY554 pKa = 10.98KK555 pKa = 10.39DD556 pKa = 3.59DD557 pKa = 4.25LVSTTLTAAYY567 pKa = 9.99SFKK570 pKa = 10.63FLWGGDD576 pKa = 3.87TISEE580 pKa = 3.99QVVRR584 pKa = 11.84NPCRR588 pKa = 11.84ADD590 pKa = 3.4APAPSYY596 pKa = 9.22PHH598 pKa = 6.4RR599 pKa = 11.84QPRR602 pKa = 11.84DD603 pKa = 3.47VQVIDD608 pKa = 3.87PRR610 pKa = 11.84LVGPQWVFHH619 pKa = 5.21TWDD622 pKa = 2.84WRR624 pKa = 11.84RR625 pKa = 11.84GLFGKK630 pKa = 10.31KK631 pKa = 9.57AIKK634 pKa = 10.0RR635 pKa = 11.84VSQKK639 pKa = 10.57PDD641 pKa = 3.38DD642 pKa = 5.36DD643 pKa = 4.73EE644 pKa = 7.08DD645 pKa = 3.59FTAPYY650 pKa = 9.67KK651 pKa = 10.11IPRR654 pKa = 11.84YY655 pKa = 9.11FPPPDD660 pKa = 3.2RR661 pKa = 11.84EE662 pKa = 4.21GARR665 pKa = 11.84EE666 pKa = 3.83EE667 pKa = 4.78DD668 pKa = 3.73SASEE672 pKa = 4.82SEE674 pKa = 4.25DD675 pKa = 3.11QGSNFIPEE683 pKa = 3.99EE684 pKa = 4.12EE685 pKa = 4.19EE686 pKa = 3.72ALEE689 pKa = 4.76AGLQGSQLQQHH700 pKa = 5.91RR701 pKa = 11.84VQRR704 pKa = 11.84VYY706 pKa = 10.72ILQQLRR712 pKa = 11.84EE713 pKa = 4.14QRR715 pKa = 11.84RR716 pKa = 11.84MGQQLQHH723 pKa = 6.3LTRR726 pKa = 11.84EE727 pKa = 4.01LLKK730 pKa = 10.5RR731 pKa = 11.84RR732 pKa = 11.84RR733 pKa = 11.84LQYY736 pKa = 10.35KK737 pKa = 8.16PRR739 pKa = 11.84NYY741 pKa = 9.84FPKK744 pKa = 9.98LRR746 pKa = 11.84QRR748 pKa = 11.84YY749 pKa = 6.19TCFLHH754 pKa = 7.32LDD756 pKa = 3.88PDD758 pKa = 3.97ADD760 pKa = 3.7ALPRR764 pKa = 11.84KK765 pKa = 9.44SGKK768 pKa = 9.66PNTRR772 pKa = 11.84PAEE775 pKa = 4.21PSTAPLEE782 pKa = 4.44PTSTAPLCYY791 pKa = 9.26PYY793 pKa = 10.55LPSDD797 pKa = 3.64VCVKK801 pKa = 9.83FEE803 pKa = 4.41PQLQINKK810 pKa = 9.71AVGVTTWSVSVYY822 pKa = 10.24KK823 pKa = 10.57SHH825 pKa = 7.38

Molecular weight: 97.1 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

948

123

825

474.0

54.86

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.013 ± 4.781

1.688 ± 0.351

5.169 ± 0.515

4.325 ± 1.017

3.903 ± 0.076

6.962 ± 3.959

2.637 ± 0.666

3.797 ± 1.013

5.169 ± 2.412

6.857 ± 1.303

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.371 ± 0.261

4.219 ± 0.307

8.017 ± 2.708

5.38 ± 1.751

10.338 ± 1.409

5.591 ± 0.712

5.907 ± 1.618

5.274 ± 0.944

2.532 ± 0.423

4.852 ± 1.505
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski