Penicillium antarcticum

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Ascomycota; saccharomyceta; Pezizomycotina; leotiomyceta; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Penicillium

Average proteome isoelectric point is 6.33

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 11372 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1V6PQS0|A0A1V6PQS0_9EURO Uncharacterized protein OS=Penicillium antarcticum OX=416450 GN=PENANT_c056G04703 PE=4 SV=1
MM1 pKa = 7.06TFNVFMTGLLAATAVALPQPHH22 pKa = 5.6WTRR25 pKa = 11.84DD26 pKa = 3.21AEE28 pKa = 4.78SNVEE32 pKa = 3.88ARR34 pKa = 11.84SSGGGVQIVNNMDD47 pKa = 3.46TNVYY51 pKa = 9.73LWSTDD56 pKa = 3.42NNPGSMQTISSGGGDD71 pKa = 4.07YY72 pKa = 10.89SEE74 pKa = 4.83KK75 pKa = 10.12WATNSDD81 pKa = 3.35GGGISIKK88 pKa = 10.21MSTTEE93 pKa = 4.19SEE95 pKa = 4.45DD96 pKa = 3.43SVLQFEE102 pKa = 4.64YY103 pKa = 9.93TQDD106 pKa = 2.86GSTIYY111 pKa = 10.46WDD113 pKa = 3.58MSSIDD118 pKa = 4.66LDD120 pKa = 3.84STSDD124 pKa = 3.7FVKK127 pKa = 10.62SGFNVQPSDD136 pKa = 3.72SSCTSVSCAAGDD148 pKa = 4.13ANCKK152 pKa = 8.72EE153 pKa = 4.92AYY155 pKa = 9.02QKK157 pKa = 10.99PDD159 pKa = 3.39DD160 pKa = 4.46VNTNSCSLDD169 pKa = 3.23AGFTLTLGG177 pKa = 3.67

Molecular weight: 18.79 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1V6Q9C1|A0A1V6Q9C1_9EURO 1 3-beta-glucanosyltransferase OS=Penicillium antarcticum OX=416450 GN=PENANT_c010G08026 PE=3 SV=1
MM1 pKa = 7.42FSLRR5 pKa = 11.84TGALPQAIRR14 pKa = 11.84ASTSTMRR21 pKa = 11.84APMTRR26 pKa = 11.84FSQIPQQPSTSTILTSRR43 pKa = 11.84PFSLLSTPTRR53 pKa = 11.84FQPSTLGSRR62 pKa = 11.84LPSTLTTSFSPLSSLRR78 pKa = 11.84AGAGQVPLQSRR89 pKa = 11.84SFSASASLGVRR100 pKa = 11.84RR101 pKa = 11.84VTFRR105 pKa = 11.84PSRR108 pKa = 11.84RR109 pKa = 11.84VQKK112 pKa = 10.3RR113 pKa = 11.84RR114 pKa = 11.84HH115 pKa = 5.75GYY117 pKa = 9.09LARR120 pKa = 11.84KK121 pKa = 9.08KK122 pKa = 10.39DD123 pKa = 3.6RR124 pKa = 11.84NGRR127 pKa = 11.84KK128 pKa = 7.16TLTRR132 pKa = 11.84RR133 pKa = 11.84LLKK136 pKa = 10.33GRR138 pKa = 11.84KK139 pKa = 7.59EE140 pKa = 4.08LSWW143 pKa = 4.66

Molecular weight: 15.96 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

11372

0

11372

5328184

8

6088

468.5

51.87

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.483 ± 0.021

1.225 ± 0.009

5.661 ± 0.014

6.128 ± 0.025

3.817 ± 0.015

6.767 ± 0.019

2.413 ± 0.009

5.077 ± 0.014

4.692 ± 0.017

8.97 ± 0.024

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.279 ± 0.008

3.776 ± 0.013

5.971 ± 0.024

4.076 ± 0.016

5.891 ± 0.019

8.424 ± 0.026

6.009 ± 0.016

6.081 ± 0.017

1.471 ± 0.009

2.787 ± 0.012
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski