Aspergillus pseudotamarii

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Ascomycota; saccharomyceta; Pezizomycotina; leotiomyceta; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae;

Average proteome isoelectric point is 6.45

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 13426 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A5N6SZI1|A0A5N6SZI1_ASPPS Uncharacterized protein OS=Aspergillus pseudotamarii OX=132259 GN=BDV38DRAFT_244018 PE=4 SV=1
MM1 pKa = 7.31VNWTLAGITIQGDD14 pKa = 3.67VLITSVIIHH23 pKa = 6.32TLLTLLKK30 pKa = 10.56LYY32 pKa = 10.58GLYY35 pKa = 10.76VLGVLADD42 pKa = 4.66FAANFQADD50 pKa = 4.01EE51 pKa = 4.36LEE53 pKa = 4.17EE54 pKa = 4.01WLEE57 pKa = 3.83NARR60 pKa = 11.84ARR62 pKa = 11.84RR63 pKa = 11.84DD64 pKa = 3.15NAYY67 pKa = 9.98AYY69 pKa = 10.9SSLTDD74 pKa = 3.39SDD76 pKa = 5.37LADD79 pKa = 3.63TDD81 pKa = 3.99ITDD84 pKa = 4.07SDD86 pKa = 4.37YY87 pKa = 11.56TDD89 pKa = 3.53SDD91 pKa = 3.61

Molecular weight: 10.11 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A5N6SRP6|A0A5N6SRP6_ASPPS Peptide-methionine (R)-S-oxide reductase OS=Aspergillus pseudotamarii OX=132259 GN=BDV38DRAFT_284515 PE=3 SV=1
MM1 pKa = 7.88PSHH4 pKa = 6.91KK5 pKa = 10.39SFRR8 pKa = 11.84TKK10 pKa = 10.45QKK12 pKa = 9.54LAKK15 pKa = 9.74AQRR18 pKa = 11.84QNRR21 pKa = 11.84PIPQWIRR28 pKa = 11.84LRR30 pKa = 11.84TGNTIRR36 pKa = 11.84YY37 pKa = 5.79NAKK40 pKa = 8.89RR41 pKa = 11.84RR42 pKa = 11.84HH43 pKa = 4.14WRR45 pKa = 11.84KK46 pKa = 7.51TRR48 pKa = 11.84LGLL51 pKa = 4.09

Molecular weight: 6.28 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

13426

0

13426

6204971

49

9286

462.2

51.28

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.194 ± 0.018

1.367 ± 0.008

5.538 ± 0.014

5.977 ± 0.02

3.867 ± 0.011

6.819 ± 0.018

2.461 ± 0.009

5.195 ± 0.013

4.533 ± 0.018

9.244 ± 0.022

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.193 ± 0.007

3.722 ± 0.01

5.855 ± 0.021

4.011 ± 0.012

5.988 ± 0.017

8.27 ± 0.019

5.96 ± 0.014

6.289 ± 0.014

1.542 ± 0.008

2.976 ± 0.009
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski