Atkinsonella hypoxylon virus (isolate 2H) (AhV)

Taxonomy: Viruses; Riboviria; Orthornavirae; Pisuviricota; Duplopiviricetes; Durnavirales; Partitiviridae; Betapartitivirus; Atkinsonella hypoxylon virus

Average proteome isoelectric point is 6.4

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>sp|Q85056|CAPSD_AHV2H Capsid protein OS=Atkinsonella hypoxylon virus (isolate 2H) OX=647331 PE=3 SV=1
MM1 pKa = 7.61SSNDD5 pKa = 3.3SAQTRR10 pKa = 11.84NLQEE14 pKa = 3.52EE15 pKa = 4.73RR16 pKa = 11.84FNEE19 pKa = 4.26RR20 pKa = 11.84TSTPTVVTAVLPDD33 pKa = 3.8TNGPTTNSTSGSVGPPHH50 pKa = 6.86PTPNVPVPTQSSSDD64 pKa = 3.65PPSASGIFAKK74 pKa = 10.69EE75 pKa = 2.99IDD77 pKa = 3.8LPRR80 pKa = 11.84NVIQHH85 pKa = 6.2SGNKK89 pKa = 9.7FILDD93 pKa = 3.63VVPDD97 pKa = 3.56SRR99 pKa = 11.84FPTFAITEE107 pKa = 4.32FVQRR111 pKa = 11.84SFSNFTFEE119 pKa = 3.95QYY121 pKa = 11.06SYY123 pKa = 11.35VSPASLVGYY132 pKa = 8.97LVYY135 pKa = 10.08MIHH138 pKa = 7.07AFVFLVDD145 pKa = 3.53AFEE148 pKa = 4.54RR149 pKa = 11.84SPMSAYY155 pKa = 10.26ASEE158 pKa = 4.28IDD160 pKa = 3.76ASHH163 pKa = 6.97AYY165 pKa = 10.24LRR167 pKa = 11.84IIDD170 pKa = 4.53AFSDD174 pKa = 3.74AYY176 pKa = 10.1IPDD179 pKa = 3.93FLFEE183 pKa = 4.6ILDD186 pKa = 3.91TYY188 pKa = 11.0LSHH191 pKa = 7.69RR192 pKa = 11.84LDD194 pKa = 3.21IRR196 pKa = 11.84SKK198 pKa = 11.05LEE200 pKa = 3.64MNVSYY205 pKa = 11.17GSVLYY210 pKa = 10.44KK211 pKa = 10.31YY212 pKa = 9.26DD213 pKa = 3.33APRR216 pKa = 11.84IVAPSIFLLAHH227 pKa = 5.99NQLISQSRR235 pKa = 11.84EE236 pKa = 3.35STAYY240 pKa = 9.81EE241 pKa = 3.76KK242 pKa = 10.42WLDD245 pKa = 3.91SIVIHH250 pKa = 6.23YY251 pKa = 9.5SRR253 pKa = 11.84AVIRR257 pKa = 11.84VGNLVGGLYY266 pKa = 10.04QSSHH270 pKa = 6.2GSTTTHH276 pKa = 4.98FTYY279 pKa = 10.71RR280 pKa = 11.84NWFARR285 pKa = 11.84SLSRR289 pKa = 11.84LADD292 pKa = 3.5SATHH296 pKa = 5.66RR297 pKa = 11.84THH299 pKa = 7.14LRR301 pKa = 11.84RR302 pKa = 11.84PMISEE307 pKa = 4.26FDD309 pKa = 3.77YY310 pKa = 11.38NIPSVNNNTYY320 pKa = 10.54NPYY323 pKa = 10.1VHH325 pKa = 7.56LLMLEE330 pKa = 4.09PNNRR334 pKa = 11.84NITLDD339 pKa = 4.09FIRR342 pKa = 11.84SLSSFCSTEE351 pKa = 3.83LKK353 pKa = 9.57ATRR356 pKa = 11.84TLRR359 pKa = 11.84DD360 pKa = 3.65HH361 pKa = 7.12ISRR364 pKa = 11.84RR365 pKa = 11.84SAAISRR371 pKa = 11.84CVIKK375 pKa = 10.88GPEE378 pKa = 3.81APTWHH383 pKa = 6.81SSPLDD388 pKa = 3.72DD389 pKa = 5.66LKK391 pKa = 11.4EE392 pKa = 3.97KK393 pKa = 10.69SKK395 pKa = 10.91QGNFSQFCEE404 pKa = 4.14VAKK407 pKa = 10.73FGLPRR412 pKa = 11.84KK413 pKa = 9.11EE414 pKa = 3.94NSEE417 pKa = 4.18SYY419 pKa = 9.74TFKK422 pKa = 10.65FPKK425 pKa = 9.96DD426 pKa = 3.06ASTIDD431 pKa = 3.17TAFYY435 pKa = 10.31LIQEE439 pKa = 4.42NGRR442 pKa = 11.84SSVLDD447 pKa = 3.28PTTADD452 pKa = 3.56EE453 pKa = 4.31EE454 pKa = 4.62LHH456 pKa = 5.62TEE458 pKa = 4.27GMNLLFDD465 pKa = 5.17PYY467 pKa = 10.98DD468 pKa = 4.44DD469 pKa = 4.51EE470 pKa = 6.63SSAHH474 pKa = 5.68YY475 pKa = 8.7ATVLSGKK482 pKa = 10.14LIQNSNIDD490 pKa = 3.89GEE492 pKa = 4.8TLLLPDD498 pKa = 4.47PTTGLARR505 pKa = 11.84TNSRR509 pKa = 11.84YY510 pKa = 9.78LQGSVLIRR518 pKa = 11.84NVLPEE523 pKa = 4.17FDD525 pKa = 3.2QHH527 pKa = 6.77EE528 pKa = 4.27IRR530 pKa = 11.84LFPRR534 pKa = 11.84YY535 pKa = 8.53PQISRR540 pKa = 11.84LSASLTLLFNMRR552 pKa = 11.84QVWIPRR558 pKa = 11.84FKK560 pKa = 10.91QKK562 pKa = 10.37VDD564 pKa = 3.66EE565 pKa = 4.23QPKK568 pKa = 10.35LSNFSWNEE576 pKa = 3.81GCDD579 pKa = 3.51GTVPSLNVVTAEE591 pKa = 4.14SSTNGPAAEE600 pKa = 3.97QQVILWSSYY609 pKa = 7.78RR610 pKa = 11.84HH611 pKa = 5.58VSNSDD616 pKa = 3.0RR617 pKa = 11.84PTVDD621 pKa = 2.39TVYY624 pKa = 10.86YY625 pKa = 10.37YY626 pKa = 10.07STLEE630 pKa = 3.97LLFGTRR636 pKa = 11.84SSMMQTYY643 pKa = 10.32NLHH646 pKa = 5.83QLLSLHH652 pKa = 6.42

Molecular weight: 73.67 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>sp|Q85056|CAPSD_AHV2H Capsid protein OS=Atkinsonella hypoxylon virus (isolate 2H) OX=647331 PE=3 SV=1
MM1 pKa = 7.07STLLIPQDD9 pKa = 4.27TIAHH13 pKa = 5.87TFDD16 pKa = 3.27EE17 pKa = 4.97AVASEE22 pKa = 4.4SNLRR26 pKa = 11.84IDD28 pKa = 4.26EE29 pKa = 4.2VPEE32 pKa = 4.03NYY34 pKa = 10.08LEE36 pKa = 4.59RR37 pKa = 11.84FIHH40 pKa = 6.43PSEE43 pKa = 4.38PEE45 pKa = 3.62NFEE48 pKa = 4.29FYY50 pKa = 10.77SLRR53 pKa = 11.84DD54 pKa = 2.96SDD56 pKa = 4.19IPSKK60 pKa = 10.73RR61 pKa = 11.84IPKK64 pKa = 10.14NGIQVFEE71 pKa = 4.01NLKK74 pKa = 9.96YY75 pKa = 9.46HH76 pKa = 6.24TNSKK80 pKa = 11.06DD81 pKa = 3.56NLYY84 pKa = 10.65KK85 pKa = 10.52DD86 pKa = 3.98QPSSGPSPMRR96 pKa = 11.84GVANIIRR103 pKa = 11.84EE104 pKa = 4.22YY105 pKa = 10.42FPQYY109 pKa = 11.01LDD111 pKa = 6.1DD112 pKa = 4.31LRR114 pKa = 11.84TWCRR118 pKa = 11.84PKK120 pKa = 10.95SSDD123 pKa = 4.36DD124 pKa = 4.37SIFNDD129 pKa = 3.73FNHH132 pKa = 6.22EE133 pKa = 3.93QRR135 pKa = 11.84ITQPFTEE142 pKa = 4.15EE143 pKa = 3.77RR144 pKa = 11.84EE145 pKa = 4.09RR146 pKa = 11.84RR147 pKa = 11.84LLPLIDD153 pKa = 4.15HH154 pKa = 7.03FLGIKK159 pKa = 10.0PYY161 pKa = 10.62DD162 pKa = 3.38IVHH165 pKa = 5.78YY166 pKa = 9.74CDD168 pKa = 2.86TRR170 pKa = 11.84FYY172 pKa = 10.09PWKK175 pKa = 10.03LSTRR179 pKa = 11.84ADD181 pKa = 3.59YY182 pKa = 10.26FHH184 pKa = 6.62NHH186 pKa = 4.37SRR188 pKa = 11.84DD189 pKa = 3.68RR190 pKa = 11.84KK191 pKa = 8.09AHH193 pKa = 5.81AAKK196 pKa = 10.14SHH198 pKa = 7.02PDD200 pKa = 3.31FATGPTKK207 pKa = 10.32KK208 pKa = 10.42SYY210 pKa = 10.66FINSHH215 pKa = 6.13LFFDD219 pKa = 4.61RR220 pKa = 11.84STVHH224 pKa = 6.64NIKK227 pKa = 10.5EE228 pKa = 3.97YY229 pKa = 10.7GFPFRR234 pKa = 11.84PTTDD238 pKa = 2.82SARR241 pKa = 11.84NEE243 pKa = 4.18TLLDD247 pKa = 3.36LWFKK251 pKa = 10.71KK252 pKa = 10.78VPTEE256 pKa = 3.72LLVRR260 pKa = 11.84SHH262 pKa = 6.88ISKK265 pKa = 10.4RR266 pKa = 11.84DD267 pKa = 3.6NLKK270 pKa = 10.07VRR272 pKa = 11.84PVYY275 pKa = 9.36NAPMIYY281 pKa = 9.79IRR283 pKa = 11.84IEE285 pKa = 3.88CMLFYY290 pKa = 10.57PLLAQARR297 pKa = 11.84KK298 pKa = 9.35RR299 pKa = 11.84DD300 pKa = 3.66CCIMYY305 pKa = 10.45GLEE308 pKa = 4.21TIRR311 pKa = 11.84GGMNEE316 pKa = 4.62LEE318 pKa = 4.6RR319 pKa = 11.84ISNAFNSFLLIDD331 pKa = 4.18WSRR334 pKa = 11.84FDD336 pKa = 3.94HH337 pKa = 6.72LAPFTISNFFFKK349 pKa = 10.19KK350 pKa = 9.4WLPTKK355 pKa = 10.38ILIDD359 pKa = 3.39HH360 pKa = 7.16GYY362 pKa = 9.68AQISNYY368 pKa = 8.82HH369 pKa = 5.92DD370 pKa = 3.79HH371 pKa = 5.95VHH373 pKa = 6.1SFSAQAQSHH382 pKa = 7.03GIPMISKK389 pKa = 9.5EE390 pKa = 4.14YY391 pKa = 8.18QTPPEE396 pKa = 3.92ATVFAKK402 pKa = 10.34KK403 pKa = 10.25VLNLISFLEE412 pKa = 3.74RR413 pKa = 11.84WYY415 pKa = 10.94RR416 pKa = 11.84DD417 pKa = 3.53MVFVTPDD424 pKa = 2.73GFAYY428 pKa = 10.29RR429 pKa = 11.84RR430 pKa = 11.84THH432 pKa = 6.41AGVPSGILMTQFIDD446 pKa = 3.59SFVNLTILLDD456 pKa = 3.63GLIEE460 pKa = 4.64FGFTDD465 pKa = 4.07EE466 pKa = 5.17EE467 pKa = 4.4IKK469 pKa = 10.79QLLVFIMGDD478 pKa = 3.48DD479 pKa = 3.72NVIFTPWTLLKK490 pKa = 10.74LIEE493 pKa = 4.47FFDD496 pKa = 3.67WFAKK500 pKa = 8.65YY501 pKa = 8.85TLDD504 pKa = 4.06RR505 pKa = 11.84FGMVINISKK514 pKa = 10.55SAVTSIRR521 pKa = 11.84RR522 pKa = 11.84KK523 pKa = 9.97IEE525 pKa = 3.55VLGYY529 pKa = 7.72TNNYY533 pKa = 8.69GFPTRR538 pKa = 11.84SISKK542 pKa = 10.27LVGQLAYY549 pKa = 9.68PEE551 pKa = 4.23RR552 pKa = 11.84HH553 pKa = 5.03VTDD556 pKa = 4.87ADD558 pKa = 3.16MCMRR562 pKa = 11.84AIGFAYY568 pKa = 10.01ASCAQSEE575 pKa = 4.66TFHH578 pKa = 6.83ALCKK582 pKa = 10.35KK583 pKa = 9.16VFQYY587 pKa = 11.09YY588 pKa = 9.35FAKK591 pKa = 10.12TSINEE596 pKa = 3.85RR597 pKa = 11.84LILKK601 pKa = 9.13GRR603 pKa = 11.84KK604 pKa = 9.12AEE606 pKa = 3.95LPGMFFAYY614 pKa = 9.6PDD616 pKa = 3.53VSEE619 pKa = 5.43HH620 pKa = 5.91IRR622 pKa = 11.84LDD624 pKa = 3.54HH625 pKa = 6.68FPSLSEE631 pKa = 4.1VRR633 pKa = 11.84ILLSKK638 pKa = 9.78FQGYY642 pKa = 9.62LKK644 pKa = 7.84EE645 pKa = 4.59TPFGTIPTFSTPQTLRR661 pKa = 11.84DD662 pKa = 3.51QTQQ665 pKa = 2.43

Molecular weight: 77.65 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

1317

652

665

658.5

75.66

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.391 ± 0.186

0.911 ± 0.195

5.771 ± 0.264

5.239 ± 0.117

6.606 ± 0.913

3.797 ± 0.076

3.341 ± 0.179

6.378 ± 0.763

4.176 ± 0.929

9.112 ± 0.261

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.822 ± 0.189

4.86 ± 0.434

5.998 ± 0.09

3.265 ± 0.172

6.302 ± 0.11

9.719 ± 1.674

6.758 ± 0.396

5.011 ± 0.637

1.063 ± 0.094

4.48 ± 0.021
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski