Streptomonospora alba

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Actinobacteria; Actinomycetia; Streptosporangiales; Nocardiopsaceae;

Average proteome isoelectric point is 5.94

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 4307 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0C2FEN2|A0A0C2FEN2_9ACTN Uncharacterized protein OS=Streptomonospora alba OX=183763 GN=LP52_18155 PE=4 SV=1
MM1 pKa = 7.42SPSSSRR7 pKa = 11.84SRR9 pKa = 11.84FAAGAVTAASAIALSMLAGAPGAHH33 pKa = 6.75AAEE36 pKa = 4.69LVTNGGFDD44 pKa = 3.45NGTTGWWNTEE54 pKa = 3.64NAPAEE59 pKa = 4.34VADD62 pKa = 4.29GRR64 pKa = 11.84LCADD68 pKa = 3.72VEE70 pKa = 4.5GGTANAWDD78 pKa = 5.1AIVGQDD84 pKa = 4.84GIALTSGEE92 pKa = 4.4SYY94 pKa = 10.96EE95 pKa = 4.3FTFTASASEE104 pKa = 4.31GTTVRR109 pKa = 11.84ALIQEE114 pKa = 3.99PTEE117 pKa = 4.43PYY119 pKa = 9.73TAFLTANPALTSEE132 pKa = 4.5TQTFSHH138 pKa = 7.02TFTADD143 pKa = 2.85ATLDD147 pKa = 3.63DD148 pKa = 4.44AQLVFQLGGEE158 pKa = 4.14AEE160 pKa = 4.08AWTFCLDD167 pKa = 4.62DD168 pKa = 4.65VSLQDD173 pKa = 3.54GAEE176 pKa = 4.08PPVYY180 pKa = 10.25EE181 pKa = 5.39PDD183 pKa = 2.95TGPPVKK189 pKa = 10.39VNQVGYY195 pKa = 10.69LPDD198 pKa = 3.93GPKK201 pKa = 10.39NATLVTDD208 pKa = 4.1ATSAQPWTLRR218 pKa = 11.84DD219 pKa = 3.23ADD221 pKa = 3.87GAAVAEE227 pKa = 4.93GQTSPQGTEE236 pKa = 3.55QSSGQNVHH244 pKa = 6.84SIDD247 pKa = 3.67FSDD250 pKa = 3.88YY251 pKa = 8.24TEE253 pKa = 4.61KK254 pKa = 11.12GSGYY258 pKa = 8.19TLAVGDD264 pKa = 4.52DD265 pKa = 3.59VSHH268 pKa = 7.21PFDD271 pKa = 3.73ISGSAYY277 pKa = 9.65KK278 pKa = 10.41DD279 pKa = 3.35LRR281 pKa = 11.84TDD283 pKa = 3.43SLSLYY288 pKa = 8.96YY289 pKa = 9.36PQRR292 pKa = 11.84SGIEE296 pKa = 3.81IDD298 pKa = 3.92DD299 pKa = 4.04SLMPGYY305 pKa = 10.28GRR307 pKa = 11.84AAGHH311 pKa = 6.28VGVEE315 pKa = 4.23PNQGDD320 pKa = 3.96LSVPCAPDD328 pKa = 3.18SGCDD332 pKa = 3.53YY333 pKa = 10.94EE334 pKa = 6.2LDD336 pKa = 4.33VSGGWYY342 pKa = 10.02DD343 pKa = 3.88AGDD346 pKa = 3.49HH347 pKa = 6.07GKK349 pKa = 10.25YY350 pKa = 9.61VVNGGISASQVMSVWEE366 pKa = 4.04RR367 pKa = 11.84TTYY370 pKa = 11.23ADD372 pKa = 3.19SASPDD377 pKa = 3.35RR378 pKa = 11.84LGDD381 pKa = 3.3GTLPVPEE388 pKa = 4.72QGNDD392 pKa = 3.28VPDD395 pKa = 3.92VLDD398 pKa = 3.64EE399 pKa = 4.8ARR401 pKa = 11.84WEE403 pKa = 4.06MDD405 pKa = 3.19FLMKK409 pKa = 9.91MQVPEE414 pKa = 4.27GEE416 pKa = 4.34EE417 pKa = 3.79LAGMAHH423 pKa = 6.57HH424 pKa = 6.95KK425 pKa = 9.3MHH427 pKa = 7.0DD428 pKa = 4.03EE429 pKa = 4.01EE430 pKa = 4.82WTGLPLMPADD440 pKa = 4.69DD441 pKa = 4.28PQPRR445 pKa = 11.84YY446 pKa = 9.43LQPPSTAATLNLAATGAQCARR467 pKa = 11.84VFEE470 pKa = 5.01SYY472 pKa = 10.87DD473 pKa = 3.25SEE475 pKa = 4.31FADD478 pKa = 3.59RR479 pKa = 11.84CLEE482 pKa = 4.09TAEE485 pKa = 4.9KK486 pKa = 10.02AWQAAQEE493 pKa = 4.29NPDD496 pKa = 3.68VLADD500 pKa = 3.78PEE502 pKa = 4.31NGVGGGAYY510 pKa = 10.23SDD512 pKa = 5.21DD513 pKa = 3.83DD514 pKa = 4.72VSDD517 pKa = 3.53EE518 pKa = 4.94FYY520 pKa = 10.34WAAAEE525 pKa = 4.28LFITTGEE532 pKa = 3.91QSYY535 pKa = 11.18EE536 pKa = 4.06DD537 pKa = 3.6AVLDD541 pKa = 4.34HH542 pKa = 6.89EE543 pKa = 4.93LHH545 pKa = 6.05TEE547 pKa = 4.07DD548 pKa = 4.55VFTAGGLAWGAVAPLGRR565 pKa = 11.84MNLALVPNKK574 pKa = 10.33LDD576 pKa = 3.68DD577 pKa = 3.94RR578 pKa = 11.84DD579 pKa = 3.78RR580 pKa = 11.84VVDD583 pKa = 4.07SVVAGADD590 pKa = 3.51EE591 pKa = 4.16YY592 pKa = 11.71LDD594 pKa = 3.53TLRR597 pKa = 11.84NHH599 pKa = 7.2AFGLPYY605 pKa = 10.52APPDD609 pKa = 3.52NVFVWGSNSQVLNNMVVMTAAYY631 pKa = 10.33DD632 pKa = 3.72LTGDD636 pKa = 3.57GAYY639 pKa = 10.07RR640 pKa = 11.84DD641 pKa = 4.1GVLEE645 pKa = 4.21GMDD648 pKa = 3.88YY649 pKa = 10.92ILGRR653 pKa = 11.84NALGQSYY660 pKa = 7.56VTGYY664 pKa = 11.12GEE666 pKa = 3.97QFSKK670 pKa = 10.56NQHH673 pKa = 4.93SRR675 pKa = 11.84WYY677 pKa = 10.58ANQLDD682 pKa = 4.36ADD684 pKa = 4.48LPNPPEE690 pKa = 4.32GTVSGGPNSQTSTWDD705 pKa = 3.09PVAQDD710 pKa = 4.0KK711 pKa = 11.73LEE713 pKa = 4.31GCAPQFCYY721 pKa = 10.09IDD723 pKa = 5.73DD724 pKa = 4.03IEE726 pKa = 4.27SWATNEE732 pKa = 5.0LTVNWNAPLAIVSSFIADD750 pKa = 3.36QTGEE754 pKa = 4.23GDD756 pKa = 3.84PPAEE760 pKa = 5.1DD761 pKa = 3.48EE762 pKa = 4.53TAPTAPGKK770 pKa = 9.16PQVSGVTSSQAEE782 pKa = 4.45LTWEE786 pKa = 4.06ASTDD790 pKa = 3.44EE791 pKa = 4.73GGSGVEE797 pKa = 4.61GYY799 pKa = 10.24DD800 pKa = 3.44VYY802 pKa = 11.57AGTGDD807 pKa = 3.75GAQKK811 pKa = 10.49VGSASGPSFTLTGLEE826 pKa = 4.28SEE828 pKa = 4.67TEE830 pKa = 4.24YY831 pKa = 10.5TVHH834 pKa = 6.25VVARR838 pKa = 11.84DD839 pKa = 3.52GAGNRR844 pKa = 11.84SEE846 pKa = 4.81PGPNAAFTTEE856 pKa = 3.69AGGTGGEE863 pKa = 4.24AACEE867 pKa = 3.82VDD869 pKa = 4.71YY870 pKa = 10.42STNDD874 pKa = 2.96WNGGFTASVSVVNTGDD890 pKa = 3.29TPIRR894 pKa = 11.84DD895 pKa = 3.38WEE897 pKa = 4.37LGFEE901 pKa = 4.7FGAGQEE907 pKa = 4.24ITHH910 pKa = 6.43GWNAEE915 pKa = 3.61WSQDD919 pKa = 3.14GSAVTASGLSWNSDD933 pKa = 3.7LAPGSSVSAGFNGTAQDD950 pKa = 3.79GNPAPEE956 pKa = 4.09EE957 pKa = 4.01FTVNGQTCAA966 pKa = 3.44

Molecular weight: 101.63 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0C2FMM6|A0A0C2FMM6_9ACTN Hydrolase OS=Streptomonospora alba OX=183763 GN=LP52_00515 PE=3 SV=1
MM1 pKa = 7.49RR2 pKa = 11.84HH3 pKa = 5.9SLLGGDD9 pKa = 3.6RR10 pKa = 11.84RR11 pKa = 11.84RR12 pKa = 11.84RR13 pKa = 11.84PLGFGRR19 pKa = 11.84LTRR22 pKa = 11.84IGAVAGGAVARR33 pKa = 11.84GNIAVGVAVRR43 pKa = 11.84GTVRR47 pKa = 11.84TVARR51 pKa = 11.84RR52 pKa = 11.84RR53 pKa = 11.84VHH55 pKa = 6.08IPVRR59 pKa = 11.84RR60 pKa = 11.84GVRR63 pKa = 11.84IPVRR67 pKa = 11.84GAEE70 pKa = 4.04PVAVVAARR78 pKa = 11.84VSAVSVAAGTAAGVVRR94 pKa = 11.84LL95 pKa = 4.12

Molecular weight: 9.79 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

4307

0

4307

1345555

28

2499

312.4

33.47

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

13.665 ± 0.062

0.774 ± 0.011

6.261 ± 0.036

6.575 ± 0.036

2.78 ± 0.021

9.574 ± 0.04

2.198 ± 0.017

3.281 ± 0.024

1.599 ± 0.022

10.053 ± 0.044

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.946 ± 0.015

1.727 ± 0.018

5.834 ± 0.033

2.695 ± 0.024

8.271 ± 0.038

5.317 ± 0.029

5.468 ± 0.024

8.492 ± 0.029

1.428 ± 0.015

2.063 ± 0.02
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski