Marinobacter mobilis

Taxonomy: cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter

Average proteome isoelectric point is 5.97

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3442 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1H3DCN1|A0A1H3DCN1_9ALTE DNA-binding transcriptional response regulator NtrC family contains REC AAA-type ATPase and a Fis-type DNA-binding domains OS=Marinobacter mobilis OX=488533 GN=SAMN04487960_11226 PE=4 SV=1
MM1 pKa = 7.09QNSAALWTLPLALTLAACNVDD22 pKa = 2.82ISTTEE27 pKa = 3.88VTPGQPDD34 pKa = 3.81SEE36 pKa = 4.76TPTPVKK42 pKa = 10.71DD43 pKa = 3.67LDD45 pKa = 3.86SDD47 pKa = 4.32GVADD51 pKa = 4.77SADD54 pKa = 3.44NCLLVPNADD63 pKa = 3.47QANSNGDD70 pKa = 3.87ALGDD74 pKa = 3.71ACDD77 pKa = 3.47IDD79 pKa = 4.2TPVVEE84 pKa = 5.1GKK86 pKa = 9.91YY87 pKa = 10.19QLTIYY92 pKa = 10.38HH93 pKa = 6.62EE94 pKa = 4.74LGSEE98 pKa = 4.16YY99 pKa = 10.78LDD101 pKa = 3.87AASGVCVSATDD112 pKa = 3.49SPFTVDD118 pKa = 3.53VLVKK122 pKa = 10.24GSQVFLSEE130 pKa = 4.06EE131 pKa = 3.83GGEE134 pKa = 3.9RR135 pKa = 11.84RR136 pKa = 11.84FYY138 pKa = 11.26GIADD142 pKa = 3.4TSGNLEE148 pKa = 4.34VFTHH152 pKa = 6.89PEE154 pKa = 3.79GQFAATNGYY163 pKa = 9.43FSEE166 pKa = 4.44GTRR169 pKa = 11.84RR170 pKa = 11.84ITFDD174 pKa = 3.98YY175 pKa = 10.97SDD177 pKa = 3.51QQSNLDD183 pKa = 3.61GTVSCNIAARR193 pKa = 11.84VEE195 pKa = 4.55ANFNYY200 pKa = 8.24ATSLIAPAAMVPPGLSPGDD219 pKa = 3.22TFYY222 pKa = 10.94IVFVTSAGTVANLSVDD238 pKa = 3.38AFNLFVNDD246 pKa = 3.53VADD249 pKa = 4.42GSSLKK254 pKa = 10.14GTDD257 pKa = 3.55NGDD260 pKa = 4.01LRR262 pKa = 11.84WKK264 pKa = 10.54AILGHH269 pKa = 7.42DD270 pKa = 4.4DD271 pKa = 3.4GTIQGEE277 pKa = 4.24NLFSVGSTSPIYY289 pKa = 10.47NLNGDD294 pKa = 3.91RR295 pKa = 11.84LANNASDD302 pKa = 4.09FFNGGMLNPIEE313 pKa = 4.15YY314 pKa = 10.26DD315 pKa = 3.31EE316 pKa = 5.09TGTSLGDD323 pKa = 3.43VNVSVGLTQTGSNLLRR339 pKa = 11.84QGDD342 pKa = 3.84NTLGGNDD349 pKa = 3.88FMGDD353 pKa = 2.94GCSRR357 pKa = 11.84GRR359 pKa = 11.84SGQINKK365 pKa = 9.32PAFAASISGDD375 pKa = 4.0DD376 pKa = 4.14FCDD379 pKa = 3.34STPYY383 pKa = 10.27PLYY386 pKa = 10.59SVSPLLEE393 pKa = 4.24VPSAPP398 pKa = 4.25

Molecular weight: 41.67 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1H2WHE6|A0A1H2WHE6_9ALTE Amino acid ABC transporter substrate-binding protein PAAT family (TC 3.A.1.3.-) OS=Marinobacter mobilis OX=488533 GN=SAMN04487960_104170 PE=4 SV=1
MM1 pKa = 7.45KK2 pKa = 9.51RR3 pKa = 11.84TFQPSVLKK11 pKa = 10.49RR12 pKa = 11.84KK13 pKa = 7.97RR14 pKa = 11.84THH16 pKa = 5.89GFRR19 pKa = 11.84ARR21 pKa = 11.84MATANGRR28 pKa = 11.84KK29 pKa = 8.88ILARR33 pKa = 11.84RR34 pKa = 11.84RR35 pKa = 11.84AKK37 pKa = 10.4GRR39 pKa = 11.84ARR41 pKa = 11.84LSAA44 pKa = 3.91

Molecular weight: 5.11 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3442

0

3442

1144372

29

2741

332.5

36.62

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

10.075 ± 0.046

0.975 ± 0.012

5.893 ± 0.027

6.272 ± 0.037

3.678 ± 0.028

7.849 ± 0.035

2.269 ± 0.022

5.071 ± 0.029

3.152 ± 0.028

10.945 ± 0.051

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.489 ± 0.018

3.23 ± 0.024

4.795 ± 0.031

4.3 ± 0.031

6.609 ± 0.037

5.991 ± 0.025

5.119 ± 0.029

7.309 ± 0.034

1.369 ± 0.016

2.611 ± 0.024
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski