Flavobacterium kingsejongi

Taxonomy: cellular organisms; Bacteria; FCB group; Bacteroidetes/Chlorobi group; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium

Average proteome isoelectric point is 6.62

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3535 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A2S1LL23|A0A2S1LL23_9FLAO NAD(P)-dependent oxidoreductase OS=Flavobacterium kingsejongi OX=1678728 GN=FK004_03965 PE=3 SV=1
MM1 pKa = 7.25TLANALQLIPSFWDD15 pKa = 3.35PEE17 pKa = 4.22EE18 pKa = 4.24PFPFGKK24 pKa = 9.78NDD26 pKa = 3.43HH27 pKa = 6.76SNHH30 pKa = 5.2IQRR33 pKa = 11.84LQEE36 pKa = 3.98EE37 pKa = 4.75FKK39 pKa = 11.29DD40 pKa = 3.98DD41 pKa = 4.49LPDD44 pKa = 3.82SLLEE48 pKa = 4.16YY49 pKa = 10.42IRR51 pKa = 11.84TAVPDD56 pKa = 3.57EE57 pKa = 5.11DD58 pKa = 4.57VDD60 pKa = 4.31FTNVGSTITLYY71 pKa = 11.24GIDD74 pKa = 3.73RR75 pKa = 11.84LKK77 pKa = 10.93YY78 pKa = 8.94LQPGYY83 pKa = 11.08NYY85 pKa = 10.03DD86 pKa = 4.1EE87 pKa = 5.15KK88 pKa = 10.83SQSPIEE94 pKa = 4.4SDD96 pKa = 2.65WKK98 pKa = 11.03ASFFVIGDD106 pKa = 3.57EE107 pKa = 4.84DD108 pKa = 4.58GDD110 pKa = 4.68PILIDD115 pKa = 3.66LQEE118 pKa = 4.9PEE120 pKa = 5.04DD121 pKa = 4.73GILVLEE127 pKa = 4.86HH128 pKa = 6.96GAGSWEE134 pKa = 4.13YY135 pKa = 11.07GEE137 pKa = 5.25SRR139 pKa = 11.84AATIGQFLLCSAAQHH154 pKa = 5.23QMLMADD160 pKa = 4.35EE161 pKa = 5.2DD162 pKa = 5.14PIVDD166 pKa = 5.03DD167 pKa = 4.45EE168 pKa = 6.44DD169 pKa = 4.75GFCLHH174 pKa = 7.21PEE176 pKa = 3.79VANWYY181 pKa = 8.3FPKK184 pKa = 9.48MKK186 pKa = 9.48EE187 pKa = 4.22WAGHH191 pKa = 6.2YY192 pKa = 9.45YY193 pKa = 10.01PEE195 pKa = 4.25WCSVFDD201 pKa = 3.98NSS203 pKa = 5.2

Molecular weight: 23.22 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A2S1LUD7|A0A2S1LUD7_9FLAO Cyclic nucleotide-binding protein OS=Flavobacterium kingsejongi OX=1678728 GN=FK004_16115 PE=4 SV=1
MM1 pKa = 8.29DD2 pKa = 3.49IRR4 pKa = 11.84RR5 pKa = 11.84RR6 pKa = 11.84TGSRR10 pKa = 11.84TLFLDD15 pKa = 4.25KK16 pKa = 9.37MTEE19 pKa = 4.09KK20 pKa = 10.57INARR24 pKa = 11.84MNQRR28 pKa = 11.84DD29 pKa = 3.54EE30 pKa = 4.06

Molecular weight: 3.68 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3535

0

3535

1176805

30

4271

332.9

37.37

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.223 ± 0.052

0.767 ± 0.018

5.256 ± 0.035

6.178 ± 0.047

5.019 ± 0.043

6.469 ± 0.046

1.794 ± 0.021

7.748 ± 0.046

7.298 ± 0.076

9.235 ± 0.053

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.241 ± 0.026

5.792 ± 0.044

3.642 ± 0.035

3.638 ± 0.025

3.455 ± 0.028

6.23 ± 0.031

6.493 ± 0.099

6.299 ± 0.042

1.007 ± 0.017

4.215 ± 0.03
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski