Bovine serum-associated circular virus

Taxonomy: Viruses; unclassified viruses

Average proteome isoelectric point is 8.82

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 1 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A385MJ33|A0A385MJ33_9VIRU Uncharacterized protein OS=Bovine serum-associated circular virus OX=2340909 PE=4 SV=1
MM1 pKa = 7.22PRR3 pKa = 11.84ARR5 pKa = 11.84RR6 pKa = 11.84TFYY9 pKa = 9.23TARR12 pKa = 11.84RR13 pKa = 11.84QTVKK17 pKa = 10.18WSPHH21 pKa = 5.76LLIQPMTMEE30 pKa = 4.53ATQGEE35 pKa = 4.6FASYY39 pKa = 10.81QLIAKK44 pKa = 9.32NSSDD48 pKa = 3.03TSIPVPSVIKK58 pKa = 10.5VKK60 pKa = 10.5NFKK63 pKa = 10.8VSIDD67 pKa = 3.41TSAPSDD73 pKa = 3.9FSQGMKK79 pKa = 10.32YY80 pKa = 10.6LNAYY84 pKa = 9.49LMYY87 pKa = 9.61VPEE90 pKa = 5.65GITLNTDD97 pKa = 3.24TAKK100 pKa = 10.61NHH102 pKa = 6.36PEE104 pKa = 3.8WIIAWRR110 pKa = 11.84GINDD114 pKa = 3.69TNQSDD119 pKa = 3.44RR120 pKa = 11.84DD121 pKa = 3.88NYY123 pKa = 10.34VLSSRR128 pKa = 11.84LARR131 pKa = 11.84NLNSGDD137 pKa = 3.88AIYY140 pKa = 11.04LLFAGYY146 pKa = 8.86TNTTHH151 pKa = 6.7SFSFVATTTYY161 pKa = 10.63VSRR164 pKa = 11.84ANN166 pKa = 3.38

Molecular weight: 18.76 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A385MJ33|A0A385MJ33_9VIRU Uncharacterized protein OS=Bovine serum-associated circular virus OX=2340909 PE=4 SV=1
MM1 pKa = 7.22PRR3 pKa = 11.84ARR5 pKa = 11.84RR6 pKa = 11.84TFYY9 pKa = 9.23TARR12 pKa = 11.84RR13 pKa = 11.84QTVKK17 pKa = 10.18WSPHH21 pKa = 5.76LLIQPMTMEE30 pKa = 4.53ATQGEE35 pKa = 4.6FASYY39 pKa = 10.81QLIAKK44 pKa = 9.32NSSDD48 pKa = 3.03TSIPVPSVIKK58 pKa = 10.5VKK60 pKa = 10.5NFKK63 pKa = 10.8VSIDD67 pKa = 3.41TSAPSDD73 pKa = 3.9FSQGMKK79 pKa = 10.32YY80 pKa = 10.6LNAYY84 pKa = 9.49LMYY87 pKa = 9.61VPEE90 pKa = 5.65GITLNTDD97 pKa = 3.24TAKK100 pKa = 10.61NHH102 pKa = 6.36PEE104 pKa = 3.8WIIAWRR110 pKa = 11.84GINDD114 pKa = 3.69TNQSDD119 pKa = 3.44RR120 pKa = 11.84DD121 pKa = 3.88NYY123 pKa = 10.34VLSSRR128 pKa = 11.84LARR131 pKa = 11.84NLNSGDD137 pKa = 3.88AIYY140 pKa = 11.04LLFAGYY146 pKa = 8.86TNTTHH151 pKa = 6.7SFSFVATTTYY161 pKa = 10.63VSRR164 pKa = 11.84ANN166 pKa = 3.38

Molecular weight: 18.76 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

1

0

1

166

166

166

166.0

18.76

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.434 ± 0.0

0.0 ± 0.0

4.819 ± 0.0

2.41 ± 0.0

4.217 ± 0.0

3.614 ± 0.0

1.807 ± 0.0

6.024 ± 0.0

4.217 ± 0.0

6.627 ± 0.0

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

3.012 ± 0.0

7.229 ± 0.0

4.819 ± 0.0

3.614 ± 0.0

6.024 ± 0.0

10.241 ± 0.0

10.241 ± 0.0

5.422 ± 0.0

1.807 ± 0.0

5.422 ± 0.0
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski