Cladosporium cladosporioides virus 1

Taxonomy: Viruses; Riboviria; Polymycoviridae; Polymycovirus; Cladosporium cladosporioides polymycovirus 1

Average proteome isoelectric point is 7.41

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 5 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A076JWY5|A0A076JWY5_9VIRU Uncharacterized protein OS=Cladosporium cladosporioides virus 1 OX=1529605 PE=4 SV=1
MM1 pKa = 7.84ADD3 pKa = 3.94LARR6 pKa = 11.84LRR8 pKa = 11.84HH9 pKa = 5.66MLLDD13 pKa = 3.85PTEE16 pKa = 4.3SAVLLASMCHH26 pKa = 6.13HH27 pKa = 7.77LIPDD31 pKa = 3.85PTSVDD36 pKa = 3.23LFDD39 pKa = 4.51YY40 pKa = 10.3SFPPRR45 pKa = 11.84ARR47 pKa = 11.84DD48 pKa = 3.63WIISAPFPLFGPAIPASKK66 pKa = 10.64SSFEE70 pKa = 5.06AILEE74 pKa = 4.01PLRR77 pKa = 11.84AMEE80 pKa = 4.16YY81 pKa = 10.73NSLDD85 pKa = 3.26MAAVLMRR92 pKa = 11.84SMRR95 pKa = 11.84VADD98 pKa = 3.66NPFAKK103 pKa = 9.08VTRR106 pKa = 11.84GEE108 pKa = 4.29TTGDD112 pKa = 3.34VAQSRR117 pKa = 11.84AGAAQHH123 pKa = 6.7AAQSPIEE130 pKa = 3.9FAIYY134 pKa = 10.34DD135 pKa = 3.74VLRR138 pKa = 11.84DD139 pKa = 3.45AGYY142 pKa = 9.12TSVSDD147 pKa = 4.43ALSKK151 pKa = 10.73LQSFLTSTKK160 pKa = 10.77AFVHH164 pKa = 6.73PITRR168 pKa = 11.84QFSRR172 pKa = 11.84HH173 pKa = 4.65RR174 pKa = 11.84SAALFLINKK183 pKa = 8.37PGARR187 pKa = 11.84GPTAFLTPFFTSKK200 pKa = 10.59EE201 pKa = 4.07ATKK204 pKa = 10.85LFAAVVFRR212 pKa = 11.84SDD214 pKa = 2.82ILTSLSRR221 pKa = 11.84LNAARR226 pKa = 11.84GVTVLGYY233 pKa = 10.24AARR236 pKa = 11.84ASLEE240 pKa = 3.74AVRR243 pKa = 11.84RR244 pKa = 11.84IVEE247 pKa = 3.92PAHH250 pKa = 6.77AIVNEE255 pKa = 4.01YY256 pKa = 11.05SFDD259 pKa = 3.8PQTLSFIDD267 pKa = 3.86PAGDD271 pKa = 3.45PTYY274 pKa = 10.36HH275 pKa = 5.85ITDD278 pKa = 3.86RR279 pKa = 11.84TPSVVVAFGRR289 pKa = 11.84VLSGGSVDD297 pKa = 3.85ACSKK301 pKa = 10.97ASDD304 pKa = 4.02LRR306 pKa = 11.84TSLDD310 pKa = 3.33IPGGLPDD317 pKa = 3.28VARR320 pKa = 11.84EE321 pKa = 4.08YY322 pKa = 10.93FSSTGNVEE330 pKa = 3.82DD331 pKa = 4.88TIRR334 pKa = 11.84SAATALSDD342 pKa = 3.46FRR344 pKa = 11.84SFRR347 pKa = 11.84DD348 pKa = 3.41SHH350 pKa = 6.58PGGHH354 pKa = 6.32EE355 pKa = 4.03LNKK358 pKa = 10.82DD359 pKa = 3.15SGLSFFSRR367 pKa = 11.84DD368 pKa = 2.79RR369 pKa = 11.84ATRR372 pKa = 11.84DD373 pKa = 3.06RR374 pKa = 11.84NTAACITRR382 pKa = 11.84VEE384 pKa = 4.36EE385 pKa = 4.35VACLLRR391 pKa = 11.84SQGRR395 pKa = 11.84DD396 pKa = 2.88IARR399 pKa = 11.84MAFVVEE405 pKa = 4.03WGGPLNNDD413 pKa = 3.99SILAALALTGATACVDD429 pKa = 3.55VGPGAFKK436 pKa = 11.03VGDD439 pKa = 3.94SSEE442 pKa = 4.1EE443 pKa = 3.78LATEE447 pKa = 4.06NDD449 pKa = 3.01KK450 pKa = 11.33GAYY453 pKa = 8.7VCLIPRR459 pKa = 11.84ASTRR463 pKa = 11.84GLPRR467 pKa = 11.84MPIVGYY473 pKa = 10.41EE474 pKa = 4.13SGDD477 pKa = 3.8SVTQRR482 pKa = 11.84LDD484 pKa = 3.12RR485 pKa = 11.84LLSFISGPDD494 pKa = 3.09NYY496 pKa = 10.51PPVAYY501 pKa = 8.43ITGGSTTSGAAPADD515 pKa = 3.61IIGITQARR523 pKa = 11.84AALLTDD529 pKa = 3.66YY530 pKa = 10.42LASGSFFCGDD540 pKa = 3.0ILIPDD545 pKa = 4.6VCRR548 pKa = 11.84HH549 pKa = 6.14PPDD552 pKa = 3.94GTDD555 pKa = 4.85DD556 pKa = 3.75EE557 pKa = 5.39CLACANFDD565 pKa = 3.62YY566 pKa = 11.29SVFTVGDD573 pKa = 3.59VCQLDD578 pKa = 4.02GFSLVKK584 pKa = 10.14PRR586 pKa = 11.84ASYY589 pKa = 10.79AHH591 pKa = 6.52NLHH594 pKa = 7.1LSLEE598 pKa = 4.62WIHH601 pKa = 6.01GAARR605 pKa = 11.84EE606 pKa = 4.03FSEE609 pKa = 5.04SRR611 pKa = 11.84TLLALDD617 pKa = 3.78SVVATNVARR626 pKa = 11.84NADD629 pKa = 3.2WGDD632 pKa = 3.41FVPRR636 pKa = 11.84DD637 pKa = 3.72GPRR640 pKa = 11.84RR641 pKa = 11.84PHH643 pKa = 6.24HH644 pKa = 6.56PSYY647 pKa = 10.81GLKK650 pKa = 10.12VKK652 pKa = 10.64LIIEE656 pKa = 4.09DD657 pKa = 3.92VYY659 pKa = 11.49RR660 pKa = 11.84SMAEE664 pKa = 3.77GAEE667 pKa = 4.1EE668 pKa = 5.18GIGATKK674 pKa = 10.1TIVEE678 pKa = 4.44SLAA681 pKa = 3.57

Molecular weight: 73.28 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A076JYE6|A0A076JYE6_9VIRU Putative RNA-dependent RNA polymerase OS=Cladosporium cladosporioides virus 1 OX=1529605 PE=4 SV=1
MM1 pKa = 7.68SFEE4 pKa = 4.03RR5 pKa = 11.84SAVNSWARR13 pKa = 11.84SVPVFANPDD22 pKa = 3.74SPTSPAAGRR31 pKa = 11.84RR32 pKa = 11.84EE33 pKa = 3.88EE34 pKa = 4.46SPAARR39 pKa = 11.84HH40 pKa = 5.79GATPPRR46 pKa = 11.84GRR48 pKa = 11.84PAAVNPRR55 pKa = 11.84SSGQPPPVINKK66 pKa = 9.11HH67 pKa = 4.46VTHH70 pKa = 6.41QGSSRR75 pKa = 11.84VGGVTVYY82 pKa = 10.22PGSSVSQDD90 pKa = 3.07PEE92 pKa = 3.79RR93 pKa = 11.84RR94 pKa = 11.84RR95 pKa = 11.84QRR97 pKa = 11.84YY98 pKa = 7.47HH99 pKa = 6.74HH100 pKa = 6.82SPPEE104 pKa = 3.75HH105 pKa = 6.41GRR107 pKa = 11.84RR108 pKa = 11.84DD109 pKa = 3.78SSPHH113 pKa = 5.61GSGPPGSRR121 pKa = 11.84AGSSATHH128 pKa = 6.66EE129 pKa = 4.21ISRR132 pKa = 11.84GSSLHH137 pKa = 5.79RR138 pKa = 11.84RR139 pKa = 11.84ADD141 pKa = 3.62FGQRR145 pKa = 11.84AVEE148 pKa = 3.95AGRR151 pKa = 11.84PVGYY155 pKa = 9.69SSRR158 pKa = 11.84RR159 pKa = 11.84RR160 pKa = 11.84DD161 pKa = 3.55TVFSDD166 pKa = 4.01AARR169 pKa = 11.84MVTVPEE175 pKa = 4.6GGFVEE180 pKa = 5.09YY181 pKa = 10.48EE182 pKa = 4.24SQTVQHH188 pKa = 6.73TDD190 pKa = 2.97GTSVTTEE197 pKa = 3.74RR198 pKa = 11.84VSVSSQGSRR207 pKa = 11.84RR208 pKa = 11.84SHH210 pKa = 6.47RR211 pKa = 11.84SNPRR215 pKa = 11.84KK216 pKa = 10.1VKK218 pKa = 9.97EE219 pKa = 4.04KK220 pKa = 10.45RR221 pKa = 11.84DD222 pKa = 3.65GNEE225 pKa = 3.45KK226 pKa = 9.82RR227 pKa = 11.84KK228 pKa = 10.48KK229 pKa = 10.5RR230 pKa = 11.84MTIGEE235 pKa = 4.18WMQTT239 pKa = 3.3

Molecular weight: 26.08 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

5

0

5

2593

239

760

518.6

55.93

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

10.567 ± 0.892

0.887 ± 0.235

6.363 ± 0.392

4.512 ± 0.336

3.625 ± 0.442

8.099 ± 0.379

2.468 ± 0.299

3.702 ± 0.377

3.355 ± 0.77

8.793 ± 1.101

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.005 ± 0.315

2.43 ± 0.283

7.096 ± 0.509

2.198 ± 0.242

8.176 ± 0.702

9.603 ± 0.57

5.631 ± 0.287

7.443 ± 0.579

0.733 ± 0.132

2.314 ± 0.185
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski