Naumovozyma dairenensis (strain ATCC 10597 / BCRC 20456 / CBS 421 / NBRC 0211 / NRRL Y-12639) (Saccharomyces dairenensis)

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Ascomycota; saccharomyceta; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Naumovozyma; Naumovozyma dairenensis

Average proteome isoelectric point is 6.5

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 5523 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|G0WG71|G0WG71_NAUDC Uncharacterized protein OS=Naumovozyma dairenensis (strain ATCC 10597 / BCRC 20456 / CBS 421 / NBRC 0211 / NRRL Y-12639) OX=1071378 GN=NDAI0I02130 PE=4 SV=1
MM1 pKa = 7.6GLFDD5 pKa = 3.91QVKK8 pKa = 10.14KK9 pKa = 10.33FASGNNNNNDD19 pKa = 3.5NNNNGNDD26 pKa = 3.4NSNNNNDD33 pKa = 3.71NSNSNNDD40 pKa = 3.59DD41 pKa = 3.61FVTKK45 pKa = 10.7AEE47 pKa = 4.29NYY49 pKa = 9.25VGQDD53 pKa = 3.38KK54 pKa = 11.03VDD56 pKa = 3.41QFKK59 pKa = 11.63NKK61 pKa = 9.73IGEE64 pKa = 4.33EE65 pKa = 3.96NFNTLEE71 pKa = 4.29SKK73 pKa = 10.58VRR75 pKa = 11.84EE76 pKa = 4.21QFSKK80 pKa = 10.18TSLNDD85 pKa = 3.28KK86 pKa = 9.87NDD88 pKa = 3.51SYY90 pKa = 11.97GSSNNNGSYY99 pKa = 11.26GNSNDD104 pKa = 3.7NNNNNDD110 pKa = 3.5AYY112 pKa = 10.66GSSNNNSYY120 pKa = 11.68GNDD123 pKa = 3.29NSDD126 pKa = 4.49SYY128 pKa = 11.87GSSNNTDD135 pKa = 3.94AYY137 pKa = 10.9DD138 pKa = 3.76SSNKK142 pKa = 9.03QSSYY146 pKa = 11.84GNDD149 pKa = 3.14NDD151 pKa = 5.14DD152 pKa = 5.15SYY154 pKa = 12.24GSSNKK159 pKa = 9.44KK160 pKa = 10.04SSYY163 pKa = 11.46GNDD166 pKa = 3.11NDD168 pKa = 5.14DD169 pKa = 5.15SYY171 pKa = 12.21GSSNKK176 pKa = 9.36QSSYY180 pKa = 11.84GNDD183 pKa = 3.14NDD185 pKa = 5.14DD186 pKa = 5.15SYY188 pKa = 12.21GSSNKK193 pKa = 9.35QSSYY197 pKa = 11.69GDD199 pKa = 4.51DD200 pKa = 3.76NDD202 pKa = 5.03DD203 pKa = 4.95SYY205 pKa = 12.29GSSNKK210 pKa = 9.42KK211 pKa = 10.06SSYY214 pKa = 11.1GDD216 pKa = 3.52DD217 pKa = 3.87SYY219 pKa = 12.18GSSNKK224 pKa = 9.36QSSYY228 pKa = 11.84GNDD231 pKa = 3.14NDD233 pKa = 5.14DD234 pKa = 5.15SYY236 pKa = 12.24GSSNKK241 pKa = 9.44KK242 pKa = 10.04SSYY245 pKa = 11.46GNDD248 pKa = 3.11NDD250 pKa = 4.35DD251 pKa = 4.85SYY253 pKa = 12.13GSSHH257 pKa = 6.27KK258 pKa = 10.3QSSYY262 pKa = 11.88GNDD265 pKa = 3.14NDD267 pKa = 5.14DD268 pKa = 5.15SYY270 pKa = 12.24GSSNKK275 pKa = 9.42KK276 pKa = 10.06SSYY279 pKa = 11.1GDD281 pKa = 3.52DD282 pKa = 3.87SYY284 pKa = 12.18GSSNKK289 pKa = 9.36QSSYY293 pKa = 11.84GNDD296 pKa = 3.14NDD298 pKa = 5.14DD299 pKa = 5.15SYY301 pKa = 12.24GSSNKK306 pKa = 9.44KK307 pKa = 10.02SSYY310 pKa = 11.37GNDD313 pKa = 3.54DD314 pKa = 3.79DD315 pKa = 6.48DD316 pKa = 6.85SYY318 pKa = 12.17GSSNKK323 pKa = 9.36QSSYY327 pKa = 11.84GNDD330 pKa = 3.14NDD332 pKa = 5.14DD333 pKa = 5.15SYY335 pKa = 12.24GSSNKK340 pKa = 9.44KK341 pKa = 10.04SSYY344 pKa = 11.46GNDD347 pKa = 3.11NDD349 pKa = 5.14DD350 pKa = 5.15SYY352 pKa = 12.21GSSNKK357 pKa = 9.35QSSYY361 pKa = 11.69GDD363 pKa = 4.51DD364 pKa = 3.76NDD366 pKa = 5.03DD367 pKa = 4.43SYY369 pKa = 12.28GSSNSNTYY377 pKa = 10.61GNNNDD382 pKa = 4.21DD383 pKa = 4.53SYY385 pKa = 11.42GTDD388 pKa = 3.05RR389 pKa = 11.84NSYY392 pKa = 10.45GNSNQNSYY400 pKa = 11.9SNDD403 pKa = 3.2NNDD406 pKa = 2.72SYY408 pKa = 12.16GRR410 pKa = 11.84GNGNSGNNSSYY421 pKa = 11.56NNDD424 pKa = 3.3YY425 pKa = 11.49

Molecular weight: 45.98 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|G0W3U2|G0W3U2_NAUDC Tr-type G domain-containing protein OS=Naumovozyma dairenensis (strain ATCC 10597 / BCRC 20456 / CBS 421 / NBRC 0211 / NRRL Y-12639) OX=1071378 GN=NDAI0A03230 PE=4 SV=1
MM1 pKa = 7.1RR2 pKa = 11.84AKK4 pKa = 9.11WRR6 pKa = 11.84KK7 pKa = 9.07KK8 pKa = 6.93RR9 pKa = 11.84TRR11 pKa = 11.84RR12 pKa = 11.84LKK14 pKa = 9.48RR15 pKa = 11.84KK16 pKa = 8.41RR17 pKa = 11.84RR18 pKa = 11.84KK19 pKa = 9.19VRR21 pKa = 11.84ARR23 pKa = 11.84SKK25 pKa = 10.98

Molecular weight: 3.34 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

5523

0

5523

2865626

25

4961

518.9

58.86

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

4.804 ± 0.028

1.13 ± 0.011

6.001 ± 0.023

6.562 ± 0.031

4.309 ± 0.021

4.651 ± 0.028

2.123 ± 0.012

7.229 ± 0.021

7.49 ± 0.032

9.421 ± 0.033

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.09 ± 0.01

7.178 ± 0.047

4.313 ± 0.022

4.051 ± 0.028

4.119 ± 0.021

8.845 ± 0.036

6.326 ± 0.028

5.05 ± 0.023

0.965 ± 0.009

3.338 ± 0.016
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski