Mesobacillus foraminis

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Firmicutes; Bacilli; Bacillales; Bacillaceae; Mesobacillus

Average proteome isoelectric point is 6.33

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 5324 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4R2BNC1|A0A4R2BNC1_9BACI Uncharacterized protein OS=Mesobacillus foraminis OX=279826 GN=EV146_101373 PE=4 SV=1
MM1 pKa = 7.31PAIVGAVQVISIGSSGVFNIGDD23 pKa = 3.75VYY25 pKa = 11.19KK26 pKa = 10.73IMPVSTAKK34 pKa = 9.76TFSGAGSFNTGDD46 pKa = 3.48SMQVYY51 pKa = 10.26NNQSSTNTFDD61 pKa = 4.23QDD63 pKa = 4.44SVDD66 pKa = 3.18QGNYY70 pKa = 9.16FNAA73 pKa = 4.19

Molecular weight: 7.65 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4R2B0E7|A0A4R2B0E7_9BACI TetR family transcriptional regulator OS=Mesobacillus foraminis OX=279826 GN=EV146_11567 PE=4 SV=1
MM1 pKa = 7.24KK2 pKa = 10.34RR3 pKa = 11.84SFAKK7 pKa = 9.9SWSSFQGNSISHH19 pKa = 6.53KK20 pKa = 10.67KK21 pKa = 10.25SDD23 pKa = 3.66ACTGIASVCRR33 pKa = 11.84QKK35 pKa = 11.04RR36 pKa = 11.84FGIVSFRR43 pKa = 11.84TPFLILLCFYY53 pKa = 11.24LLYY56 pKa = 10.43NDD58 pKa = 3.33PHH60 pKa = 6.38FRR62 pKa = 11.84LLGHH66 pKa = 6.7NSTSPCPIGHH76 pKa = 7.81LFQVQGSEE84 pKa = 4.33SKK86 pKa = 10.59HH87 pKa = 5.39RR88 pKa = 11.84LHH90 pKa = 6.77RR91 pKa = 11.84QYY93 pKa = 11.08FLNHH97 pKa = 5.81LRR99 pKa = 11.84VVQCMPCFSFASANIRR115 pKa = 11.84SVVSFRR121 pKa = 11.84FEE123 pKa = 3.7KK124 pKa = 10.88CFLLLVYY131 pKa = 10.72ASGGRR136 pKa = 11.84LLFLKK141 pKa = 10.53ASSSPKK147 pKa = 10.13RR148 pKa = 11.84FIFPFF153 pKa = 3.98

Molecular weight: 17.58 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

5324

0

5324

1559474

29

4227

292.9

32.8

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.286 ± 0.033

0.726 ± 0.011

5.061 ± 0.025

7.5 ± 0.038

4.573 ± 0.026

7.334 ± 0.028

2.07 ± 0.017

7.434 ± 0.034

6.747 ± 0.032

9.845 ± 0.037

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.748 ± 0.017

4.347 ± 0.023

3.806 ± 0.028

3.56 ± 0.02

4.16 ± 0.026

6.151 ± 0.022

5.195 ± 0.023

6.787 ± 0.03

1.119 ± 0.015

3.55 ± 0.022
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski